| Id Trinity | FTRINITY_DN56817_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_11301 |
| Sequence | GTTGTCATTAACCAATTGCAAAAACAATTTCAACAAAACGCCAAAGCCAAATCACGGAACAATGAACTTCACCAATCACTTCCTATTGTTCATGCTTCAA TTCATCCTTGTTTTGGGTTGTGCTGCTAACCCAGGGGTGCAATTGGAAATTCAAGATAAATATGTTGTATTGGATAATGGAATAGTTCAGGTTACCATAG CAAATCCTGAAGGATATGTGACTGGAATCCAATATAATGGGGTCGATAATTTGCTCGAAGTTATTAGCAATGAAACTGACAGAGGGTACTGGGATATGGT ATGGGATGAAGGTGGAAATAAAACAACAGCAAAAGGAAAAAAGGGAAAGGGTAGATTTGAAAGGATGGAAACCACAAATTTGGAGGTAGTAGTGGAAAAT GAAGAACAAGTTGAATTATCATTCACCAGAATTTGGAATGCTTCTCTTGAAGGGAAGATTGCACCTTTGAATATTGATAAAAGGTTTATATTGCTTCGTG GTTCATCTGGGTTCTATACTTATGCAATTTATGAGCATTTGAAGGAATGGCCAGCATTTGATCTTGACAATACTAGGATTGTTTTCAAGCTAAGGAAAGA CAAGTTTCATTACATGGTAGTAGCAGACAATAGACGAAGATTTATGCCTCTGCCTGATGATCGTGAAGAGGGAAGAGGCCAAATTCTGGATTATCCAGAA GCTGTTCTTCTTGTGAATCCCGTGGAACCTGAATTTAAAGGAGAGGTTGATGATAAATATGAATACTCTATCGAGAGTAGAAATAATCGAGTTCATGGCT GGATATCTACAAACTCATTTGAGCCCACTGGGTTTTGGCTAATTACACCAAGCCCTGAATTCAGATCTGCTGGGCCCCTCAAACAATACATGGCTTCTCA TGTTGGCCCCTATTCTCTTTCGGTATTTCATAGTACGCATTATTCAGGATTAGATTTGATAATGAAATTTGGACCTAATGAGCCATGGAAGAAAGTTTTT GGGCCCATGTTCATTTACCTTAATTCTCTATCTAATGGGGAAAACCCAATTACCCTATGGAAGGATGCTAAAAAACAGTTGGTCGATGAAGCTGAGAGTT GGCCTTATACATTTCCAGCTTCAAAGGAACTCCTCTCATCTAAGCAACGAGGTAAAGTCCAAGGTAGATTGCTTGTCCAAGACAGGTACATCAAGGATGC ATCCATCCCAGTTAGCGGTGGTTATGTAGGATTAGCATCCCCTGGAAATGCTGGATCTTGGCAAAGAGAATCAAAGGGTTATCAATTTTGGACCACTACT GATGATAAAGGCTATTTTTCAATTATTAACATACGTCCAGGGAACTATAATCTCTACTCTTGGGTCATTGGATACATTGGTGACTATAAATATGGTTCCA TTATTAACATAACGTCAGGTCTTAAAAAATCATGATGCCTTTGTCTTATTGTCCAAAATTTATGTTACTCTTATTTCTATACTCACTTGGAAAGTAAATG TGTAACATAGGTTCTAACATTAATGTGGGGGAGCTTGTTTATGAGCCACCAAGAGATGGCCCTACATTGTGGGAAATAGGCATCCCTGATCGTACAGCTG CTGAGTTCTATGTTCCTGATCCAAATCCCAAATATATCAACAAACTCTATGTTAATCACCCAGACAAGTTTAGACAATATGGCTTATGGGAGAGATATGC TGATTTGTATCCAAAAGAAGACCTAGTTTACACTGTTGGTCTTAGTGACTTCCGAAAAGATTGGTTTTTTGCTCAAGTCTCAAGGAAGAAAGAAAATAAC ACATACCAAGCAACCACATGGAAAATTAATTTCAATCTTGATCATGTGGATACCATTGGAACCTATAAGTTGCGTGTGGCTCTGGCATCTATACATTATG CAGATCTACAGGTTCGGATAAACAATGCAGAAGCAAACCCACCTTTATTTTCAAGTGGACAAATTGGATCAGATAATGCCATAGCAAGACATGGAATTCA TGGGCTCTATTGGCTATTCAACATTGAAGTACAAGGCAATCTTCTTGTGAAGGGAAACAATACCTTATTTCTAACACAACCAATTAACACAAGTCCTTTT CAAGGTATTTTGTATGATTATATTCGTTTAGAAGGACCTAGTATGGATCAAACCTATGGGTGATTGTGCCTAGGGTCGAGTTCGAGTTCAAAAATTAGAT CCGATCAATATTTAGGGTCAGATATGGACCAAGCATAACCTGTCCCGACCCGTCTCATGCTCACTCATTCATCATGTTTGTATATGTTTCAATTCAAATG TATACATAGTAATAATTACTATTTTGGTCAAAAAATTTATTGATTTTCTAATTTTTTTTATCATATATACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63392; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11301
| Blastp | Rhamnogalacturonate lyase from Dickeya with 23.38% of identity |
|---|---|
| Blastx | Rhamnogalacturonate lyase from Dickeya with 24.12% of identity |
| Eggnog | Rhamnogalacturonate lyase(ENOG410YE12) |
| Kegg | Link to kegg annotations (Dda3937_01465) |
| CantataDB | Link to cantataDB annotations (CNT0002172) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417438.1) |
| Pfam | Rhamnogalacturonate lyase family (PF06045.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |