Ll_transcript_11305

• Id Trinity: FTRINITY_DN56817_c1_g1_i8
• Name Transcript: Ll_transcript_11305
• Sequence: GTTGTCATTAACCAATTGCAAAAACAATTTCAACAAAACGCCAAAGCCAAATCACGGAACAATGAACTTCACCAATCACTTCCTATTGTTCATGCTTCAA TTCATCCTTGTTTTGGGTTGTGCTGCTAACCCAGGGGTGCAATTGGAAATTCAAGATAAATATGTTGTATTGGATAATGGAATAGTTCAGGTTACCATAG CAAATCCTGAAGGATATGTGACTGGAATCCAATATAATGGGGTCGATAATTTGCTCGAAGTTATTAGCAATGAAACTGACAGAGGGTACTGGGATATGGT ATGGGATGAAGGTGGAAATAAAACAACAGCAAAAGGAAAAAAGGGAAAGGGTAGATTTGAAAGGATGGAAACCACAAATTTGGAGGTAGTAGTGGAAAAT GAAGAACAAGTTGAATTATCATTCACCAGAATTTGGAATGCTTCTCTTGAAGGGAAGATTGCACCTTTGAATATTGATAAAAGGTTTATATTGCTTCGTG GTTCATCTGGGTTCTATACTTATGCAATTTATGAGCATTTGAAGGAATGGCCAGCATTTGATCTTGACAATACTAGGATTGTTTTCAAGCTAAGGAAAGA CAAGTTTCATTACATGGTAGTAGCAGACAATAGACGAAGATTTATGCCTCTGCCTGATGATCGTGAAGAGGGAAGAGGCCAAATTCTGGATTATCCAGAA GCTGTTCTTCTTGTGAATCCCGTGGAACCTGAATTTAAAGGAGAGGTTGATGATAAATATGAATACTCTATCGAGAGTAGAAATAATCGAGTTCATGGCT GGATATCTACAAACTCATTTGAGCCCACTGGGTTTTGGCTAATTACACCAAGCCCTGAATTCAGATCTGCTGGGCCCCTCAAACAATACATGGCTTCTCA TGTTGGCCCCTATTCTCTTTCGGTATTTCATAGTACGCATTATTCAGGATTAGATTTGATAATGAAATTTGGACCTAATGAGCCATGGAAGAAAGTTTTT GGGCCCATGTTCATTTACCTTAATTCTCTATCTAATGGGGAAAACCCAATTACCCTATGGAAGGATGCTAAAAAACAGTTGGTCGATGAAGCTGAGAGTT GGCCTTATACATTTCCAGCTTCAAAGGAACTCCTCTCATCTAAGCAACGAGGTAAAGTCCAAGGTAGATTGCTTGTCCAAGACAGGTACATCAAGGATGC ATCCATCCCAGTTAGCGGTGGTTATGTAGGATTAGCATCCCCTGGAAATGCTGGATCTTGGCAAAGAGAATCAAAGGGTTATCAATTTTGGACCACTACT GATGATAAAGGCTATTTTTCAATTATTAACATACGTCCAGGGAACTATAATCTCTACTCTTGGGTCATTGGATACATTGGTGACTATAAATATGGTTCCA TTATTAACATAACGTCAGGTTCTAACATTAATGTGGGGGAGCTTGTTTATGAGCCACCAAGAGATGGCCCTACATTGTGGGAAATAGGCATCCCTGATCG TACAGCTGCTGAGTTCTATGTTCCTGATCCAAATCCCAAATATATCAACAAACTCTATGTTAATCACCCAGACAAGTTTAGACAATATGGCTTATGGGAG AGATATGCTGATTTGTATCCAAAAGAAGACCTAGTTTACACTGTTGGTCTTAGTGACTTCCGAAAAGATTGGTTTTTTGCTCAAGTCTCAAGGAAGAAAG AAAATAACACATACCAAGCAACCACATGGAAAATTAATTTCAATCTTGATCATGTGGATACCATTGGAACCTATAAGTTGCGTGTGGCTCTGGCATCTAT ACATTATGCAGATCTACAGGTTCGGATAAACAATGCAGAAGCAAACCCACCTTTATTTTCAAGTGGACAAATTGGATCAGATAATGCCATAGCAAGACAT GGAATTCATGGGCTCTATTGGCTATTCAACATTGAAGTACAAGGCAATCTTCTTGTGAAGGGAAACAATACCTTATTTCTAACACAACCAATTAACACAA GTCCTTTTCAAGGTATTTTGTATGATTATATTCGTTTAGAAGGACCTAGTATGGATCAAACCTATGGGTGATTGTGCCTAGGGTCGAGTTCGAGTTCAAA AATTAGATCCGATCAATATTTAGGGTCAGATATGGACCAAGCATAACCTGTCCCGACCCGTCTCATGCTCACTCATTCATCATGTTTGTATATGTTTCAA TTCAAATGTATACATAGTAATAATTACTATTTTGGTCAAAAAATTTATTGATTTTCTAATTTTTTTTATCATATATACA
• Tissue: flowers
• Gene name: LI_gene_63392;
• Additional information: details;

Expression of Ll_transcript_11305

FPKM

• FPAB: 0
• FPNAB: 0.7
• LF1: 0.7
• LF2: 1.9
• LF3: 1.5
• LF4: 1.3
• UF1: 1.4
• UF2: 2.5
• UF3: 1.5
• UF4: 1.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_11305

• Blastp: Rhamnogalacturonate lyase from Dickeya with 23.79% of identity
• Blastx: Rhamnogalacturonate lyase from Dickeya with 24.33% of identity
• Eggnog: Rhamnogalacturonate lyase(ENOG410YE12)
• Kegg: Link to kegg annotations (Dda3937_01465)
• CantataDB: Link to cantataDB annotations (CNT0002172)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417438.1)
• Pfam: Rhamnogalacturonate lyase family (PF06045.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;