| Id Trinity | FTRINITY_DN56822_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_9045 |
| Sequence | GGAAGGGTATGATTTGTGCTGAATAGTTGCGAAATAAAGGGTGGTATAGTAATTTTAACTACAGAAGAAGGAAAGAAACATAAAAATCCACAAAAGGGTT GAAAAATCAGTGATGGATTACGCTGAGAGAGAGAAAAGAAACACAACCCTCGCGGCGGCATAGTAATGGTGACTCCTTTGATTCATGCTACGAATCTCAT ACATCAATATTCCCTCTCTTTTTTCTCTATTCATTAGATTTTGCTTTTGATTACTATTACTTTATCTTTATTGCACCGATCTCACATTCTGCATCTCAGA TCTATGCTTTAATTCAGTGACGCGAGGTGAAGTCACTGGAAGCAGCGGTTTATCGATCTCTTCCTGAATTTGATTAACACAAACCATGAATCGATCGATA AACCTCTGCATCCAGCGCTCACTTTCCCTCCCTTTCTAAACTCTTCAAAACCATTATTATTATGTTTCATCCGTATTTTTTAGTGAGGTTCAATGAAATA TTCAATGATCCAGTTTGTGATTATGTTATTCTCACAAAATATAGACTCAATAATATTAAATTGTCTATTGCTGCTGTAATCTTAGGAAATGTTATTTTTA CCTATATTTTCTTCTATGTTTTTTGATTATGTATCCTTTCAGTATTCTTTTTTTTTCATTACCAGGCCAACAGATTGAATTTCTGCTCTCGCAACAGTTG AAAGGACTTTCCGTGGAAATTGGTAAAACACTTTATAGCAGATTGAAGAATGTTTTTGAATAACGGGTGATACTTCATCTTATTTCCTAATTATCATTTT ATCAATATTAATCTAGTAAATTGTTTGAAGATGCTTCAATATTGATTAATAAAGAAAACTGATAGTAGAAAATGACTTTGCATAGAGAGAAAAAGGAAGT GCTGTGTCACATGAATAATCCATGGACCACACCAGACAGTTGTGGTAGTTTGACCATTGACGTAGAAGGTTCATGTAAATTATTTAATGTAATTTATTTT ATGATTGTGCACTTTAAATCATTTTAACTTTTAATGGTTTTTAGTCCTCTAACCGGATAACGTCCCGAATCTTATCCCAAAGTTTGTGTCAGGCCAATAA AAACATGTCACATTAGTTAAAAGAAATTAGTTAAAAGAAATTAAACATTCATCATTTTTTTTTTTGCATTTTGATTAATTTGGTACATAGTTGGGGACAA CAAATCTTCATCCCCTCTAACTAATGCACAATTAGTGTAACTTTCTGACTTATGCATAATTAGTTCTTGCAAGCATCTTCTCTTGTAAATTTGAGTTAAA GCAAAGTTAAAAGGTTTATAAACTTCATTTTATGACTCGAAATTAACATGACATTTTGGGTAATTAAACAATCACATCAGGTAAAGTCTATGAAGTATAA ATTTACCAGTACACCCATGCCTCCAAAGTCAAGCCATAATAAAAGTTCCTTATAAGCTAACGGTGTTTCCCAACACTGTTAGAAATGGGAAATATGGCAT TCCTCCTCGATCCCACATCGCAAAGAAGACATGCAAAGAGCTTGGTTGTAGTTTTCGACCTTGTCTTCTATTTATAAAAAAAGTTAAAGATGTATGCACT GACGGTATATGAGTTTTATGCATTGTCATTATATCTTCACTATCGATATTTAATTATTATTAACTTTTTTTAAAAAGATAATCCAAATAAATGGTAGATA ATGGAGTGTACATGTACAAGAGATGTATTCACTCCAAAAATAATGGTTAAAATTATTCCAAATCCTTGCCCTTTATTCATGAAGCTTCACTACCCTGCGT TGGGGACACTCCATTTGCAATGGCGCTAATTGAATTAATGAATGACTCTAAAATAAATATAAGTCATTTTTGTGGATTGGTATGGATTTGATAAGTTCTT GCTATTTAAAAAAAGTTTAATCATTAAGTTAATATATCCATGCTAAAAAATGCAAACCCAACGCAGTATATGATATATCATCTTATTAAATATTTATACC TATAAGAAAATGAAATATCACAATAAAGATTTAATATGTATGTACTGACAGTATAAATATTTTTTACACTATCATCAAATCACCAAAGATTTTAAACTCT AGCAACAATAATATAAAAAAGAAATTAATAGATTAAAGATGACCAATCATGACTTGGCGTCTTGAAGTGGGGCCTCTGGTTAAAAGAAACATGCCACGTG GGATTAGTGATAATGTTTTTGATCCTCAAATGTAACAAAGGTTAAACTCACTTTCCATGTCCACTCATCTCTCATTACACTAAACTCACACTATGGAGAT TTCTGCAATGGCTTCAACCACTCCTTCTTCCACTTCCTCTCTCACACTCAACACTTTCTGCAAGCCTCCTCACCTGAAACATTCCCATATCTCACTCCCA ACCTCAACCACCATTTCACTTCTCACTCTCTTCTCCCCTCCCTACGAAGCCAAAGCAATCTCCAAGGATCAGATTCTCTCTTCCCTAACCCAAGTGGAGA AAACGATCGATCAGGTTCAGGAAGTGGGTTCCAGTTTTTTGGACAGTTCACAGCGTGCTTTTGAAGCTATAGGGAGTGCTTTGAAACCAGCAATTGAAAC AGTGTTGCCGTTTGTGCAGCAAGCTGGGGAAGAGGCCTTGAAAGTTGCTTCACCGGTCATATCAGAGGTTGCAAAGAAGGCACAAGAAGCACTCCAAAGC TCCGGTGTTGATGCTCAACCAGTTCTTAAGACAGTGGCAGATGCTGCAGAACAAACGACCAAGGTGATTGAAGTTGCCAAACCAATAGCTTCAACAACTG TTGAGACCTTGTCTTCTTCAGATCCTACTGTGATTGCTGGAACGGCTGGAGCACTTTTTATTGCATACCTTCTGTTTCCTCCAATCTGGTCTGCAATCTC CTTTAATTTCCGTGGTTACAAAGGTGATCTTACCGCTGCTCAAACCCTTGATCTAATATCTACCCAAAACTACATTTTGCTTGATATTAGGTCAGAGAAG GATAAGGACAAGACCGGTATCCCCCGCCTTCCCTCTAGTGCTAAAAACAAGTTGATTTCTATTCCTTTGGAAGAACTGCCAAGTAAGCTGAAAGGAGTGG TGAGGAATGTGAAGAACGTAGAAGCTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGATTCGTA CTCGGACTCGGCTAAAATAGTTGCAAGAACACTAACCGGCCTTGGTTTTAAGAACAGCTGGATTATTGCTGATGGGTTTTCTGGGGGCAGAGGATGGATA AATAGTAGGTTAGGAACAGATTCATATAAATTTTCTTTTGCAGAAGTGCTGTCACCATCCAGAGTCATTCCTGCTGCTGTTAGAAATTTTGGTACCACAA GCCAATCTAGTAGGAAACTTCTACCTGGGTCTGACTGAATCTTTTTCTGCATTCTAATGAGTCATTTTTATTGATTAAATTGATCATGTGATAGCCCATA CCAAATCCTCTCTTTTCATCTGCTTGTTCACTTTCAACTCTTCACCTTTATCAATGGATTGTTCCTGGTTTATTATCATTCCCAATCACTACAAATCTAT GGACATGGTTGAAATAATAATATCCACAACGGGAAGACATGTTTTGAGTTATTAGAGTAGTCACCTTAATAGTACTGCATATTGAGCAAGAGCAACTACT GTGACTAAGTGTGAATAACACATCATATTTATCATTTGGTCAATCAATACAAAAGACAATTTTTAATCAAAATTTTTAAACATATTAATTACTCTTATAC TTATGAATTAGCTTTGGCAGTGTAGTTGTAAATTTATCAAAGGTTGTTGTAGTTTGAAGTTGCAAATGTATTCAAAGATGATTAATTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63438; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9045
| Blastp | Calcium sensing receptor, chloroplastic from Arabidopsis with 68.16% of identity |
|---|---|
| Blastx | Calcium sensing receptor, chloroplastic from Arabidopsis with 70.33% of identity |
| Eggnog | Calcium sensing receptor(ENOG4111GSH) |
| Kegg | Link to kegg annotations (AT5G23060) |
| CantataDB | - |
| Mirbase | gma-MIR162a (MI0007208) |
| Ncbi protein | Link to NCBI protein (XP_019463659.1) |
| Pfam | Rhodanese-like domain (PF00581.19) |
| Rfam | MIR162_2 (RF00742) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |