| Id Trinity | FTRINITY_DN56827_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_9342 |
| Sequence | ATTGCATTAAAAAATAAGGAAGAAAAAGAAGAAGTTTTTTTTTTTGGTACAAAGAAGAAGTTTTTTTTGTTTCCAACTGTCCTCGCACCAGGCATTCATA TTCAAGCTGGCTGAGCTCGTACTAGAGGCAATCATGTCCAAGCCGAGAACATACACAGATATATCCCAGCGGGTATTTTTCCATGGATCAAATCCGGGAC TTGCTTGAGGGGAATCCAACATAACCCCGTAGAAAGAAAAAAAAAGTTGATATGTCATAACCTAACCTAGTAATTACTAATTAGTATCTATTTCAATTGT CTCTGCTCATTGGTGTTGGTCAACATCATGGACATCAAAACCTTTTCTTTCGCTGCCGCTACTCCACCGTTATCCGTGATCGCCGCCGCCAACCTTGCCG GAGTTTCTCTCCACATCGACACTTCTCTCCCTCCTGATTCTGTTCCCACCTTTCTCTTCTCAAATGGACTAAAATTGCGTGGAGCATATGTACTTCTGCG CTATATTGGTCGATTTGCCAGCATTCCTGATTTCTATGGTCAAAATGCAATTGAAGCTAGCCAGATTGATGAGTGGCTAGATTATGCTCCTGTACTCTCA TCAGGCCCTGCTTTTGAGAATGGGTGCAAATATATCAATGAGTATTTGGAGAAGCGTACATTTATTGTGGGTCATTCACTATCAATTGCAGACCTAGCAA TATGGTCGGGTCTTGCAGGTAAAGGTTTTTAACAATACTTCTTTGCAACTTAACTTGTGATAATGCCAGGTCTCTTTTGAATAATAATGGAAATGAAATC CATGTCTGTGATCACTACTTTTGTTGTTGTTGTAAGCATGTTGACAAACACATTTATGGGCTATGGCTATCTTATCTAGAAAACAATCTAGGCATAATCA ATTGGGTATAGTCGGTGGCTTTATTTTCTTGTTTAAACAAAGAATAACTTTGAATCCTCCTAATGTTTTACCCTAAAAACCTTTCTAATAGGCTAATACT AACTAAAGAAAGAATTTGATGTTTTTATATTCCGAAGACATTGAATGCACTTACTATTTTATTTATCTCTTCCATTATGAAGTATTATGAGAACTTTTAG GACAAAATATTAGGAGGATTTATCATTATTCGAAAAGTAACTTGACCGCAGTGGATAATTTTGTATAGTGCCGTGGGAGTGTCAGCAACAAAAAATACTG TATTTTCCATTTCTCCCTTCTAGTTATAATGTTAATTTTCAGCCAATGTGTTTTTCAGCCTTTATTCCATGTAATTTGATGATCCATTGTTATAACCCAC TTTGTACAGATGTTATGCTTTCTATGCACTTTTACAGGAACTGGAAAGAGATGGGAAAGTCTAAGGAAGTCAAAAAAATATCCAAACCTTGTACGATGGT TCAATTCTTTAGTGGCAGAATATGGTACTGCTTTAAATGAAATCATAACAACATACATTGGCAAAAAAGGATTAGGAGAACCATCAGGCACTAAATCCAA CGAGCAGGCAGTAGTACCTGATCAAATCAAGAAAGTGAATGGGAATGCATCTGAAAAGGTTAAGGGAGGAAGCAAACCTTCAGCAGAAATAGATCTTCCA GATGCCGTAGTTGGAAAGGTTCGCGTGCGATTTGCACCTGAACCTAGTGGCTATCTTCACATTGGACACTCAAAAGCTGCTCTGTTGAACAAATATTTCG CTGAGAGATACCAAGGCCAGGTTATTCTCCGTTTTGATGATACAAATCCTGCTAAAGAAAGCAATGAATTTGTGGACAATTTGTTGAAAGATATTGATAC ATTGGGTATCAAATATGAAAAAATAACATATACATCAGATTACTTCCCCGAGTTGATGGAAATGGCTGAAAGTTTACTTCGCCAGGGTAAAGCATATGTT GATGACACTCCACGTGAACAAATGCAGAAAGAGAGAATGGATGGAATAGATTCTAAACGCAGAAACAATAGTGTAGACGAGAATTTGAAATTGTGGAAGG AAATGATTGCAGGATCAGAGAGGGGCTTGCAATGCTGCATACGTGGCAAGTTAGATATGCAGAACCCTAACAAATCACTTCGAGATCCAGTTTATTATCG TTGCAATCCTATGCCTCATCATAGAATTGGATCCAAGTATAAAGTATATCCTACTTATGATTTTGCATGTCCATATGTTGATGCTATAGAAGGTATCACA CATGCCCTTCGAGCTAGTGAGTACCATGATCGCAATCCTCAGTACCACTGGATTCAAGGGGACATGGGACTTAGAAAAGTTCTCATCTATGAGTTTAGTC GGTTGAATATGGTCTACACTCTTCTCAGCAAACGAAAGCTTCTGTGGTTTGTCCAAAATGGGAAAGTTGATGGATGGGATGACCCACGGTTTCCTACAGT ACAAGGAATTGTGCGTAGAGGTTTGAAGGTCGAAGCGCTAATACAGTTCATTGTTGAGCAAGGGGCGTCAAAAAATCTAAATCTCATGGAATGGGACAAG CTCTGGACCATAAATAAGAAGATTATTGACCCCGTCTGTCCTAGACACACTGCTGTCATTGCAGAGAGACGTGTGTTGTTGACCCTCACTGATGGTCCTG ATGAACCATTTGTCCGCATCATACCTAGGCACAAGAAATATGAAGCTGCTGGAAATAAAGCTACAACATACACTAAAAGGATATGGATTGACTATGCTGA TGCAGAGACCATAGCAGTGGGTGAGGAGGTAACCTTAATGGACTGGGGAAATGCCATAGTGGAACAAATAGAGAAGGACCAAGATGGGAATATCACTGGG TTGAGTGGTGTTTTACATCTTGAAGGATCTGTGAAGACCACAAAATTGAAACTCACTTGGCTACCTGAGATTGATGAACTAGTTAGCCTGACATTGGTGG AGTTTGATTATCTTATTACAAAGAAGAAGCTTGAGGAAGGAGAGGATTTCGTTGATGTGGTAAACCCATCTACAAAAAAGGAGACACTTGCATACGGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63490; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9342
| Blastp | Glutamate--tRNA ligase, cytoplasmic from Arabidopsis with 75.36% of identity |
|---|---|
| Blastx | Glutamate--tRNA ligase, cytoplasmic from Arabidopsis with 75.36% of identity |
| Eggnog | Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (By similarity)(COG0008) |
| Kegg | Link to kegg annotations (AT5G26710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452319.1) |
| Pfam | tRNA synthetases class I (E and Q), catalytic domain (PF00749.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |