Ll_transcript_9346

• Id Trinity: FTRINITY_DN56827_c0_g1_i5
• Name Transcript: Ll_transcript_9346
• Sequence: ATTGCATTAAAAAATAAGGAAGAAAAAGAAGAAGTTTTTTTTTTTGGTACAAAGAAGAAGTTTTTTTTGTTTCCAACTGTCCTCGCACCAGGCATTCATA TTCAAGCTGGCTGAGCTCGTACTAGAGGCAATCATGTCCAAGCCGAGAACATACACAGATATATCCCAGCGGGTATTTTTCCATGGATCAAATCCGGGAC TTGCTTGAGGGGAATCCAACATAACCCCGTAGAAAGAAAAAAAAAGTTGATATGTCATAACCTAACCTAGTAATTACTAATTAGTATCTATTTCAATTGT CTCTGCTCATTGGTGTTGGTCAACATCATGGACATCAAAACCTTTTCTTTCGCTGCCGCTACTCCACCGTTATCCGTGATCGCCGCCGCCAACCTTGCCG GAGTTTCTCTCCACATCGACACTTCTCTCCCTCCTGATTCTGTTCCCACCTTTCTCTTCTCAAATGGACTAAAATTGCGTGGAGCATATGTACTTCTGCG CTATATTGGTCGATTTGCCAGCATTCCTGATTTCTATGGTCAAAATGCAATTGAAGCTAGCCAGATTGATGAGTGGCTAGATTATGCTCCTGTACTCTCA TCAGGCCCTGCTTTTGAGAATGGGTGCAAATATATCAATGAGTATTTGGAGAAGCGTACATTTATTGTGGGTCATTCACTATCAATTGCAGACCTAGCAA TATGGTCGGGTCTTGCAGATGTTATGCTTTCTATGCACTTTTACAGGAACTGGAAAGAGATGGGAAAGTCTAAGGAAGTCAAAAAAATATCCAAACCTTG TACGATGGTTCAATTCTTTAGTGGCAGAATATGGTACTGCTTTAAATGAAATCATAACAACATACATTGGCAAAAAAGGATTAGGAGAACCATCAGGCAC TAAATCCAACGAGCAGGCAGTAGTACCTGATCAAATCAAGAAAGTGAATGGGAATGCATCTGAAAAGGTTAAGGGAGGAAGCAAACCTTCAGCAGAAATA GATCTTCCAGATGCCGTAGTTGGAAAGGTTCGCGTGCGATTTGCACCTGAACCTAGTGGCTATCTTCACATTGGACACTCAAAAGCTGCTCTGTTGAACA AATATTTCGCTGAGAGATACCAAGGCCAGGTTATTCTCCGTTTTGATGATACAAATCCTGCTAAAGAAAGCAATGAATTTGTGGACAATTTGTTGAAAGA TATTGATACATTGGGTATCAAATATGAAAAAATAACATATACATCAGATTACTTCCCCGAGTTGATGGAAATGGCTGAAAGTTTACTTCGCCAGGGTAAA GCATATGTTGATGACACTCCACGTGAACAAATGCAGAAAGAGAGAATGGATGGAATAGATTCTAAACGCAGAAACAATAGTGTAGACGAGAATTTGAAAT TGTGGAAGGAAATGATTGCAGGATCAGAGAGGGGCTTGCAATGCTGCATACGTGGCAAGTTAGATATGCAGAACCCTAACAAATCACTTCGAGATCCAGT TTATTATCGTTGCAATCCTATGCCTCATCATAGAATTGGATCCAAGTATAAAGTATATCCTACTTATGATTTTGCATGTCCATATGTTGATGCTATAGAA GGTATCACACATGCCCTTCGAGCTAGTGAGTACCATGATCGCAATCCTCAGTACCACTGGATTCAAGGGGACATGGGACTTAGAAAAGTTCTCATCTATG AGTTTAGTCGGTTGAATATGGTCTACACTCTTCTCAGCAAACGAAAGCTTCTGTGGTTTGTCCAAAATGGGAAAGTTGATGGATGGGATGACCCACGGTT TCCTACAGTACAAGGAATTGTGCGTAGAGGTTTGAAGGTCGAAGCGCTAATACAGTTCATTGTTGAGCAAGGGGCGTCAAAAAATCTAAATCTCATGGAA TGGGACAAGCTCTGGACCATAAATAAGAAGATTATTGACCCCGTCTGTCCTAGACACACTGCTGTCATTGCAGAGAGACGTGTGTTGTTGACCCTCACTG ATGGTCCTGATGAACCATTTGTCCGCATCATACCTAGGCACAAGAAATATGAAGCTGCTGGAAATAAAGCTACAACATACACTAAAAGGATATGGATTGA CTATGCTGATGCAGAGACCATAGCAGTGGGTGAGGAGGTAACCTTAATGGACCGGGGAAATGCCATAGTGGAAAAAATAGAGAAGGACCAAGATGGGAAT GTCACAGGGTTGAGTGGTGTTTTGCATCTTGAAGGATCTGTGAAGACCACAAAATTGAAACTCACTTGGCTACCTGAGATTGATGAACTAGTTAGCCTGA CATTGGTGGAGTTTGATTATCTTATTACAAAGAAGAAGCTTGAGGAAGGGGAGGATTTC
• Tissue: flowers
• Gene name: LI_gene_63490;
• Additional information: details;

Expression of Ll_transcript_9346

FPKM

• FPAB: 5.6
• FPNAB: 11.8
• LF1: 9.7
• LF2: 10.9
• LF3: 9.1
• LF4: 9
• UF1: 10.3
• UF2: 10.1
• UF3: 8.6
• UF4: 7.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_9346

• Blastp: Glutamate--tRNA ligase, cytoplasmic from Arabidopsis with 75.51% of identity
• Blastx: Glutamate--tRNA ligase, cytoplasmic from Arabidopsis with 75.51% of identity
• Eggnog: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (By similarity)(COG0008)
• Kegg: Link to kegg annotations (AT5G26710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452319.1)
• Pfam: tRNA synthetases class I (E and Q), catalytic domain (PF00749.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;