| Id Trinity | FTRINITY_DN56829_c3_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_9539 |
| Sequence | CCTGTGGGTAACAGACCCGGTGGGTATCAGCATGGGTCTGGGTCCAAAAATAAAGCAACGGGGCGGGTCTGGGTAATGCACTACCCGGACCCAACCAGAC CCATTGCCATCTCTACTCTTGTGAAAGCTGCTAATAGTAAGTTACACATGTTTTATGCCCCTATGTTCGTGCGTATTTCTCCTTACATACACATTAATTG AATGTCTGCTAAAACATGCTACATCGGTTTGTTAAGTGCTGTTTTTTTCGAACTCTTGCTTAATCAGTAACAGTGGCAAAGGCAGATTTAGTTGGTTATA ATTTTGTGATCAAGCAGAAAGAGATTGCAACTTTTACATGTTGAGCTCCCTGATCCAGGTGATCTATAATAGTAAATGGGGATAGGTTATGGACTTATGG TTATAATTTGTAAACTAGTGACTATTTGCATTGCAGTTAAAGGTGACATTCTTAACATGGGGTTTTTTATTTTTCTACTGTGTGCCCAATGGCAAATTTT TACTTACCTATAGAGGATGAATTTTCACGGAGAATTGATGAACACATTTATAGATACACGTGAATTTTATTAATAGTAAACACTTATTTTGACTCCCTTA AAATTTAAAACCCCCAAATTAGTCCTAAAAAATATCAAATGTGGGTCAAGTTTGTCCTTTTTAATGTTTTTATGACCCATGACAGGAACTATTTTGACTC AAATTGGTACTCGTGAAAAAATCAGTATTCACTCTTTTATTAATAGATCAATTCGCAATGCAAATCTACCATTTTTGGTAAGTTAAAATGTCTCCTTGGG CAGACATTAGGAAAACCCTTTTAGCATTTATGCAGAACTCTAAAAGCAAGTCTTTTGCTCGTGGCACCAAAGTAGTTGATATGTGAACATCACTACAATA TCCATTTCAATAAAATATGGTTGCATATGTCTGATATTGTTTTACATATGATCTTATTATATGTTTATTTTTCAGTTATTGAAGCAGCAAACGGATTGCA AGCTTGGAAGATGTTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAGGTTGCAATGCCTGGCTTATCTGGCATTGGTCTCCTATACAAGATT ATGAGCCACAAAACACGGAAAAACATTCCAGTAATTATGATGTCTTCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGGGCTGTTGACT TTCTTGTTAAACCCATAAGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGCCATAGTTCTAGTGGTAGTGGGAGTGAAAGTGGTAC ACAAACCCAGAAGTCTGTAAAATCCAAGAGCCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGACAAGGATGATGATGGAAGTGAAGGCCTGAACAAT GGGGATGGAAGTGACAATGGGAGTGGCACTCAGAGCTCCTGGACTAAACAAGCTGTGGAAGTTGATAGTCCTGAACCTACTTTCCAGTGGGATCAAATTG CCGAATGTCCTGACAGCACTTGTGCCCAAGTTGTTCACTCCAATGCTGAAATTTCCGGTGACAAAGCAGTTCCTCTAGCCATAAAGGAGTCTACGGAACA AAAGGAACAACTTGGTAAGGTTGATTTTTCGGTTAATGCATTAACTATCTTGCTACCCCCTCTCTCTTATGAACGCACACAGATTAAGTATGTTTGTCAA ACCAATTAAGTAATATTATAGTGTATTGGTTGATGAAGCTTTTCTTCAGATCAACTATATTGTTGATCTCACTATATACTTATATAGTGAACATGTAATC ATGTTAGAATACAAGTCATGTTAAAACCAATTTCTTCCTTTGCATTGACTTTTGGATTTCTGTTAGGATCTTTATTTCAGTAGCACATGATTCTTTCAAG GATTTGAAAATTAGATCAGACTTGACCTGATGAAGGAAACTAATTCATGGTTTGGCAGAATCACAATGTGTGTGTGTATATAATCAACAGAGCCTATCTT GATGCTGGTCATTCAACAGATTGTCCAGTCTTGCAAACTTCATGCTCCATATGTCCAGTCTTGAGCATGAGGTGTGTCTGTTGTGTTAGTCTTACACCAC TGATTATGAGTAAAGAACAATTTAAATGGCTAGTGCGACTCCCCTCCAATGAGCTAGTTTTTGGGGTAGAATTATGCCCAATATTCCAATTATTAATATG TACCTAAGTGCATGTACATATGTGTACTTTTTTGAAATTTGGTTTGTTGTATTTATTCTTTTCTTGGGCAATGTCACAGATGAAAATATAATCAAGTATT GATACTGACTACATGGTCGACTATTTAAATGGGTCCTAGTCAAATCTGCAGGTTCAAAACATAGCCAAGCTCAACATGTAGGCCCCTCTAAATTCAATGA GAAAATTAGTAGAAGGCTGGACCTTAATTGTGAGAACCAATGCAGTGAGGCAAGGTGCAAAGGTATGTCACTGTCTGATGCCATTCCTAGAACTTTTGAT TCTCAGATGCATAGTGGAGAATTTGAGGCCCTAGACAGAAGACCATACTCAGATGTTGAAGATAAAGGTACTAATAATGATGAAGAATTGCCATCTCTTG AGCTTAGTTTGAAGAGGCTTAGAGGAGTTAAAGATGCTGGTAATATTCAGGATGAACGGAATGTTTTAAGACGTTCTGACCTTTCTGCCTTCTCAAGGTA TAATGCAGCCTCTAATGCTAAGAAGTCTCCCACTGGATATGTTGGAAGCAATTCTCCACATAATAATAGCTTAGAAGTCACAAAGAAAGATTTGTCTCGT GACATTCAGTCTAATTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACCACTGATAATAATGCTTTTA CTAAATCTGCTGTTATAAGGGCCCCAGCAGTGGTATCAACAACCAAGTGTCTGTATCAATCGTCGGCTTTCCAGCCTCTAAAGAACAATCTCATGTGTAC TTCTCAACAAGTAGTATTACATGATACTGAAGATAAGACTGCACCAACACTGGCACCGCCTAGAGTAGACGTCCATAAGGATTCTGCAACTAAGGACTTT TGCCACCATTATGAAAGCCATAACTGTCTTGCTAACAACATGCAGCACCAGTTGCCACCTGATCATCGTGCTGAATTATTTAAGAAAATGGCTGCTACTG CTCCAAATTTTGGGTCATCAAATGTGGTCGAAGTGGCAGTTGAAGGTAATGTTGGAAATTACAGTGTCAATAGAAGTGCTTCGGGCAGCAACAATGGAAG CAATGGACAAAATGGGTGCGGCACAGATTTTAATGTTGGAGGGACAAACATAGAAAATAACAATGGATTCGCTGTGAATAGTGGTAGTGGTGATGGTAGT GCGAACAGAGTAGATCAGAACAAGATTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63500; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9539
| Blastp | Two-component response regulator-like PRR73 from Oryza sativa with 37.91% of identity |
|---|---|
| Blastx | Two-component response regulator-like APRR7 from Arabidopsis with 67.1% of identity |
| Eggnog | two component, sigma54 specific, transcriptional regulator, Fis family(COG2204) |
| Kegg | Link to kegg annotations (4332464) |
| CantataDB | Link to cantataDB annotations (CNT0000796) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427737.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |