Id Trinity | FTRINITY_DN56829_c3_g1_i19 |
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Name Transcript | Ll_transcript_9543 |
Sequence | CCTGTGGGTAACAGACCCGGTGGGTATCAGCATGGGTCTGGGTCCAAAAATAAAGCAACGGGGCGGGTCTGGGTAATGCACTACCCGGACCCAACCAGAC CCATTGCCATCTCTACTCTTGTGAAAGCTGCTAATAGTAAGTTACACATGTTTTATGCCCCTATGTTCGTGCGTATTTCTCCTTACATACACATTAATTG AATGTCTGCTAAAACATGCTACATCGGTTTGTTAAGTGCTGTTTTTTTCGAACTCTTGCTTAATCAGTAACAGTGGCAAAGGCAGATTTAGTTGGTTATA ATTTTGTGATCAAGCAGAAAGAGATTGCAACTTTTACATGTTGAGCTCCCTGATCCAGGTGATCTATAATAGTAAATGGGGATAGGTTATGGACTTATGG TTATAATTTGTAAACTAGTGACTATTTGCATTGCAGTTAAAGGTGACATTCTTAACATGGGGTTTTTTATTTTTCTACTGTGTGCCCAATGGCAAATTTT TACTTACCTATAGAGGATGAATTTTCACGGAGAATTGATGAACACATTTATAGATACACGTGAATTTTATTAATAGTAAACACTTATTTTGACTCCCTTA AAATTTAAAACCCCCAAATTAGTCCTAAAAAATATCAAATGTGGGTCAAGTTTGTCCTTTTTAATGTTTTTATGACCCATGACAGGAACTATTTTGACTC AAATTGGTACTCGTGAAAAAATCAGTATTCACTCTTTTATTAATAGATCAATTCGCAATGCAAATCTACCATTTTTGGTAAGTTAAAATGTCTCCTTGGG CAGACATTAGGAAAACCCTTTTAGCATTTATGCAGAACTCTAAAAGCAAGTCTTTTGCTCGTGGCACCAAAGTAGTTGATATGTGAACATCACTACAATA TCCATTTCAATAAAATATGGTTGCATATGTCTGATATTGTTTTACATATGATCTTATTATATGTTTATTTTTCAGTTATTGAAGCAGCAAACGGATTGCA AGCTTGGAAGATGTTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAGGTTGCAATGCCTGGCTTATCTGGCATTGGTCTCCTATACAAGATT ATGAGCCACAAAACACGGAAAAACATTCCAGTAATTATGATGTCTTCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGGGCTGTTGACT TTCTTGTTAAACCCATAAGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGCCATAGTTCTAGTGGTAGTGGGAGTGAAAGTGGTAC ACAAACCCAGAAGTCTGTAAAATCCAAGAGCCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGACAAGGATGATGATGGAAGTGAAGGCCTGAACAAT GGGGATGGAAGTGACAATGGGAGTGGCACTCAGAGCTCCTGGACTAAACAAGCTGTGGAAGTTGATAGTCCTGAACCTACTTTCCAGTGGGATCAAATTG CCGAATGTCCTGACAGCACTTGTGCCCAAGTTGTTCACTCCAATGCTGAAATTTCCGGTGACAAAGCAGTTCCTCTAGCCATAAAGGAGTCTACGGAACA AAAGGAACAACTTGTCAAATCTGCAGGTTCAAAACATAGCCAAGCTCAACATGTAGGCCCCTCTAAATTCAATGAGAAAATTAGTAGAAGGCTGGACCTT AATTGTGAGAACCAATGCAGTGAGGCAAGGTGCAAAGGTATGTCACTGTCTGATGCCATTCCTAGAACTTTTGATTCTCAGATGCATAGTGGAGAATTTG AGGCCCTAGACAGAAGACCATACTCAGATGTTGAAGATAAAGGTACTAATAATGATGAAGAATTGCCATCTCTTGAGCTTAGTTTGAAGAGGCTTAGAGG AGTTAAAGATGCTGGTAATATTCAGGATGAACGGAATGTTTTAAGACGTTCTGACCTTTCTGCCTTCTCAAGGTAT BLAST |
Tissue | flowers |
Gene name | LI_gene_63500; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9543
Blastp | Two-component response regulator-like APRR7 from Arabidopsis with 51.97% of identity |
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Blastx | Two-component response regulator-like PRR37 from Oryza sativa with 48.26% of identity |
Eggnog | Transcription factor(COG5641) |
Kegg | Link to kegg annotations (AT5G02810) |
CantataDB | Link to cantataDB annotations (CNT0000796) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427737.1) |
Pfam | Response regulator receiver domain (PF00072.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |