| Id Trinity | FTRINITY_DN56841_c2_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_10998 |
| Sequence | CTTGCTTATTTTGTTGTTTTTAGAATGTTGACAAATTCTGAAAGTTGTTTTAACAGAGAGAAGTTTGCACTGAAAAGATTCCTATAGTACACCAAAATTA AGAGAGAGAAAGACACACACTGTCTCAGAACACAAACACCATTTCCTTTCATCACATTTCTTCCTACCCTTTTCCTAATTTCCCTTTCTATATTTTCTCT CTCCTCTTCTGCTCTTCTCAACTCCCCTTCAATTCTTATTCAACCCTCCTTGCTTTTCCACATAAAAAAAATCAACTTTTACATTATTGGGCTTTTGGGT CATGTGAAATCATGCTGCAAGTTTCAATTTTGCAATTCTAGGTGAATTTGGAATCTGGGGTGTTTGTTAATTATGCTGGAATTTTTTTGATTCATAGAAG CTAAATTTGGGTGAAAAAATTAGTTTTTGTTTGAACCAATGGTGCCAGAGATGAAGGCTTTTGGGAAGAGAAGTTTGGAGTGGGATTTGAATGATTGGAA ATGGGATGGAGATCTTTTCACTGCTACTCCATTGAATCCAGTGCCATCAGATTGTAGGAGTCAAAAGCTGTTCCCAATTGATCCCGAAATTCCTACAAAT GGCGATAGTTCTAACAATTTCGCTTCTCATTGGGACGGTATCGAACCCGGGGAAGGAAATAGTGGATTGGAGAAGATGAGAAGAGGTGTTGGTGGTGTTG TTGTTGCTGAAGGGGTGGAGCTTAATAATGAAGGTAATGGATCCCTTAATTTGAACCTTGGGGCTCAAGTATACCCAATTACGGAAGGAGAGGAAACCGG TGGAAAGAAGATGAAGATAACTGGGACTAGTTCGACTTTGAACCGCGCTGTGTGTCAAGTGGAAGATTGCAGGGCTGATCTTAGTATTGCAAAGGACTAC CACCGTCGCCACAAAGTTTGTGATGTGCATTCTAAGGCTAGCAGGGCACTGGTGGGGAATGTTATGCAGAGGTTCTGTCAACAGTGTAGCAGGTTTCATG TTATTCAAGAGTTTGATGAAGGGAAGAGAAGCTGTCGTAGACGTCTGGCAGGTCACAACAAGAGGAGGAGGAAAACACATCCTGATCCTACTGTAGCTCA TGAGGGATCTCTAAATGATGAAAAGGGTAGTAGCTATTTGTTGATGAGCCTGCTGAGGATACTGTCCAATATGCATTCAAATAACTCAGATCATACAAGA AACCAGGATGTTCTCTCTAATCTGCTGCGGAACCTGGCAAGTGTGGCAGGTACAATTAACGGAAGAAGTATAGCATCCTTATTGGACGAATCTCATGATT TGGTAAAAGCCGGGACATCTGCAGCTGCGCAGAATGTTCCAAACACAAATTCAAATGGTCCAATCCATGAGGATCCTCCTAGGGTGCAGTGTGAATCAGT GCCTGCTTATGATATGTCACACAAATGTATATCTTTAGGTAACGATGGTATAGGGAGTTCGAAACCTCCTTCGGGACCACAGTCCTCAAGTGTAATTCGG TCAAGGGATAGTGTTCCACCTCAATCAGTTGCAGCAGAGACGACAGTTCGCAGGAATGGCTTAAACAACATTGACCTGAATAATGTATATGATGACTTGC ATGATAATATCGAGAACCCCTGGAATTCTTGTACTCCCGTGCCTTCAGGGATTGGTTGTCTTGATCATCCTGCATGTGTACAACGTGACTCTCTCAGGTC AAGTCCACCACAGACAAGCAGAAACTCAGACTCCACCTCTACCCACTCACCATCTTGTTCTAGCGGAGAAGCTCAGAGTCGTACAGATCGAATTATTTTC AAACTCTTTGAAAAGGATCCTAATAATTTGCCCCTTGTTCTCCGGTCACAGATCCTTAACTGGTTATCTCACAGCCCCATGGAGATAGAGAGCTATATAA GGCCAGGCTGTATCATATTGACCGTATATCTCCGTCTCGAAAATTCTGCATGGGAGGAGCTATGCTACAATCTCGGGTCCAGCTTGAGAAAGCTTCTCGC TGCATCAAATGATTCTTTCTGGAGAACAGGATGGGTATATGCAAGAGTGCAGCACTCTGTAGCTTTTCTGCATAATGGTCAGGTAGTGGTAGATACATTG CACCTTAAAAGCCGGCAAAATTGTCAGATTTTGTGCATTAAACCACTTGCTGTTTCATCAAGTTCGAACGCTCAATTTACTGTGAAGGGATTCAACCTTT TCCTGTCTGGCACAAGGTAAATCTCTATGCACCTTATATTTATTGAGTTGAGAGGTTTTAGCTCCAAAAGAGCATAGGCAGAAGCTTATGTTGAGGTATA TCATACTTCTGGGTGGGTATGCAATTTCGTAAGAAATATTGAGAAAAGGCAGACGTAAAAATGATCACTGTGTGGTTGGACCTTATTTTCTTCCTTACAA CTCCCCCGAAATGCGTAATCTAAACGCCATAAGCCTCCAGATTCATCCCCGGATAACATGACTAAATAAGATTTTGACTAAAAGGAAGACATATGATCGA TATTATACACTATTTTTGCAGCCACTAAAGCAATTAGAATGGGTGTGTCCAAGGTATAACTTCGATTCTCTTTTTTGTGTGCCCAGAAGTTAATCTTTCA TTTGATTTCAGGTTGCTTTGTGCACTTGAAGGGAAGTATCTGATACAGGACAGTTATGATTTTATCGAAAATGCTGACACAGCTGTTGAACATGATGAAA TTCAGCAAGTCAACTTCTCTTGTCACGTTCCAAACGTGTCTGGAAGAGGGTTTATTGAGGTTGTATCCTACATGCACAAAATTTTCTAAACACTTTTTGC CCTGGCCTTCTTTTCAGAAAAGTGAAATTGGCTTCAAGTTCATTAAGAAAATTGTTTTCCCCGCATCATAAATTTCTTTAATTTAGCTTAAGCTCACCAA GACCGAGGTGATTCTATATTTGCTTTATTGCTGCCTGCCATTTGGATTTGGTGCTTTAGCTTTATAAAACTTTAAGTTGATCATAGTCCTATATAATTTT AGGTTTTCATGTAAATTGTTATTGAAAACCAATCGTTATAAACGAGAGTGAGTGCTAAGTTTGACCCCTCACCCCCTTATTCTTAGACCTTGAATTATAT ATAATTTGCATGTTTTCGGTGAAACTAATTACACCGAACTAAAATAAAGGCGGCCTAGTTCACGAAGCTCAGAGATGTTTTATAAAATGATTTAAGAAAT GGCAGAACAGATGCAACCTATCCCTGGATAGGATAAAGATGGTTTCTTCAGATGAAGCAGAGGATTGCTTAGTGTTTGAATAAGATTATTAAAAAAAACT GCATAAATGGCTTCTTTGTATTTTACTACCTTTTGAAGCTATATTTTCATCTCTGATTCAGATTTGATAATCTTCATTCAGGTGGAAGATAATGGTCTCA GCAACTGTTCCTTTCCTTTTATAGTTGCAGAGCATGAAATTTGTTTAGAGATCTGTAAGCTGGATTATGTGATCGAGGCAGCAGAGGCTGCCGCCGATGA CATCCAGATAAAAACTAAACTGATGGAAGAAAAGACACGAGCGCTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATCGATGTCGAGTGAAGGTTAGG CTAGGTTCGATGACACCTGTCCAAGATCACTTCCAATTTAATCGATTCAAGTGGCTTGTTGGCTTCTCCATGGACCATGATTGGTGTGCTGTGATTAAAA AACTCTTGGACATTATTTTTGAGGGTGTTGTCGGCACGGGAGAGCATACCTCCGTTGAGCTTGCATTGTTTGACTTGGGTCTTCTACACAGAGCAGTAAA GAGAAGCTGCAAACCTATGGTGGAACTACTGTTGAGATTTGTGCCGGTTAAAGCTTCAGATGGCAGACACAGAAAAGAGACGCAAGTCGACAAGTCTCTT GACGGATTCTTATTTAGACCTGATGCTGTTGGGCCGGCTGGGTTGACTCCCCTTCATGTCGCGGCAAGTATGAACGGATCAGAGAACGTATTGGATGCAT TAACTGATGATCCAGGAATGGTAATTCATTTCTCTTTTGCATGCATTATAAAATTTTCACACTTCTAATCTCAGTAGGCGAGCTCTTATGCAGGAAAGCT TGTATGATTCTCGGTACATTGTCAATCCTTACCCGAAATACTTATTGAAGGATTTATCATATGTTTTGCCCCTATGTCTGCCATGTTCAGGTGGGAATCG AAGCATGGAAAAGTGCACGGGACAGTACAGGTTTAACACCATACGACTACGCGTCCCTCTGTGGCTACTACTCCTACATTCATCTTGTCCAGCGGAAAAC ACGAAAGAAACATGAAAATCAACACGTGCTTGATATCCCTGGCACCCTTGTCGATTGTAACATAAAGCAGAAGCAACCAGACGGGCATAGGTCATCTAAA GTTTCAAGTTTGCAAACTGAGAAGATTGAAACCACGGCAACGGCACATCAATGTGGGCAATGCCAGCGCAAGCTGGCATACGGCGGTGGAACGAGAAAGG CGGCACTGGTTTATAGACCGGCAATGCTGTCAATGGTGGCCATTGCAGCTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63616; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_10998
| Blastp | Squamosa promoter-binding-like protein 1 from Arabidopsis with 47.37% of identity |
|---|---|
| Blastx | Squamosa promoter-binding-like protein 1 from Arabidopsis with 45.13% of identity |
| Eggnog | Squamosa promoter-binding-like protein(ENOG4110DQF) |
| Kegg | Link to kegg annotations (AT2G47070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414799.1) |
| Pfam | SBP domain (PF03110.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |