Id Trinity | FTRINITY_DN56841_c2_g1_i32 |
---|---|
Name Transcript | Ll_transcript_11017 |
Sequence | AAAATCATGTGTATGAGACTAATGATTTACATAATTTGATTATTTAGTCATAGAACTTTGACATTGTTTCTGAAATTTCCAACAATAGAGACTTAGAGAG AGTGAGAGACAGAGAAGTAATTGAGTTTGGGTTGTGGGGTTTACTCTTATCTTTAAACAGTATAGATTCATTTACTTATCAATTAAATACCATGGCCATG ATGTTGTTTATGCATTAAAATCAAATAAATGATAGCAATGTGATATGGTCACAAAGAACAGAAAAATAATAAAAAGAATCAGAGTTTGAGTCCAAGTTAG TCAGTTTTTGTATCAGACTCCTTCCTAATCCTTTCCTAATTTCCATCTTTTGTCTCTTTTTTAAGGCCAATCACTTTCTTCTTCACAAACTATGTAAATT GTGTCAAAATGCTCTTTCAAGTTTCCATTTTTAGATTCTGGGGTGTTAGCTTATTGTGTTTTTATTATTAGCCCATGTGTTTTTTTGCAGGTGGAAGTGT TGATTCTGTTTGATTTTGATTCATGGATGCTGAATTTGTGGAAAAGAATCAATTTTTAAATGGACATGTGGTGCAAGAGATGAATGGGAAGAAGAGTTTA GAGTGGGATTTGAATGATTGGAAATGGGATGGTGATCTTTTCACTGCTATGTCACTCAACTCAGTTCCATCAGATTGTAGGAGCCACCAGTTTTTCCCAC CTCATCCTGAAAATGCTGCTAATGCATCTTACAACAATTTGTCTTCTTCTATAAACTCAAGCAAGGGAAAGAGAGAATTGGAGAAAAGGACAAGAGAGGT TCTTATAGGAGAAGAAGGGAAAGAGATGCTGAATGATGAAGGTGGTTCCCTTAATTTGAAACTTGGAGGTCAAGTTTATCCTATCATGGAGGAAAGTGAA GAAAAAAGTGGAAAGAAAACAAAGGTAATTGTTGGAAGTATTCCTACTACTACTACTACCTCTAACCGCGCTGTTTGTCAGGTTCAAGATTGTAGGGCTG ATCTTAGTAATGCAAAGGATTACCACCGTCGCCACAAAGTTTGTGATGTGCATTCTAAGGCTAGCAGGGCACTGGTGGGGAATGTTATGCAGAGGTTCTG TCAACAGTGTAGCAGGTTTCATGTTATTCAAGAGTTTGATGAAGGGAAGAGAAGCTGTCGTAGACGTCTGGCAGGTCACAACAAGAGGAGGAGGAAAACA CATCCTGATCCTACTGTAGCTCATGAGGGATCTCTAAATGATGAAAAGGGTAGTAGCTATTTGTTGATGAGCCTGCTGAGGATACTGTCCAATATGCATT CAAATAACTCAGATCATACAAGAAACCAGGATGTTCTCTCTAATCTGCTGCGGAACCTGGCAAGTGTGGCAGGTACAATTAACGGAAGAAGTATAGCATC CTTATTGGACGAATCTCATGATTTGGTAAAAGCCGGGACATCTGCAGCTGCGCAGAATGTTCCAAACACAAATTCAAATGGTCCAATCCATGAGGATCCT CCTAGGGTGCAGTGTGAATCAGTGCCTGCTTATGATATGTCACACAAATGTATATCTTTAGGTAACGATGGTATAGGGAGTTCGAAACCTCCTTCGGGAC CACAGTCCTCAAGTGTAATTCGGTCAAGGGATAGTGTTCCACCTCAATCAGTTGCAGCAGAGACGACAGTTCGCAGGAATGGCTTAAACAACATTGACCT GAATAATGTATATGATGACTTGCATGATAATATCGAGAACCCCTGGAATTCTTGTACTCCCGTGCCTTCAGGGATTGGTTGTCTTGATCATCCTGCATGT GTACAACGTGACTCTCTCAGGTCAAGTCCACCACAGACAAGCAGAAACTCAGACTCCACCTCTACCCACTCACCATCTTGTTCTAGCGGAGAAGCTCAGA GTCGTACAGATCGAATTATTTTCAAACTCTTTGAAAAGGATCCTAATAATTTGCCCCTTGTTCTCCGGTCACAGATCCTTAACTGGTTATCTCACAGCCC CATGGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTGACCGTATATCTCCGTCTCGAAAATTCTGCATGGGAGGAGCTATGCTACAATCTCGGG TCCAGCTTGAGAAAGCTTCTCGCTGCATCAAATGATTCTTTCTGGAGAACAGGATGGGTATATGCAAGAGTGCAGCACTCTGTAGCTTTTCTGCATAATG GTCAGGTAGTGGTAGATACATTGCACCTTAAAAGCCGGCAAAATTGTCAGATTTTGTGCATTAAACCACTTGCTGTTTCATCAAGTTCGAACGCTCAATT TACTGTGAAGGGATTCAACCTTTTCCTGTCTGGCACAAGGTTGCTTTGTGCACTTGAAGGGAAGTATCTGATACAGGACAGTTATGATTTTATCGAAAAT GCTGACACAGCTGTTGAACATGATGAAATTCAGCAAGTCAACTTCTCTTGTCACGTTCCAAACGTGTCTGGAAGAGGGTTTATTGAGGTTGTATCCTACA TGCACAAAATTTTCTAAACACTTTTTGCCCTGGCCTTCTTTTCAGAAAAGTGAAATTGGCTTCAAGTTCATTAAGAAAATTGTTTTCCCCGCATCATAAA TTTCTTTAATTTAGCTTAAGCTCACCAAGACCGAGGTGATTCTATATTTGCTTTATTGCTGCCTGCCATTTGGATTTGGTGCTTTAGCTTTATAAAACTT TAAGTTGATCATAGTCCTATATAATTTTAGGTTTTCATGTAAATTGTTATTGAAAACCAATCGTTATAAACGAGAGTGAGTGCTAAGTTTGACCCCTCAC CCCCTTATTCTTAGACCTTGAATTATATATAATTTGCATGTTTTCGGTGAAACTAATTACACCGAACTAAAATAAAGGCGGCCTAGTTCACGAAGCTCAG AGATGTTTTATAAAATGATTTAAGAAATGGCAGAACAGATGCAACCTATCCCTGGATAGGATAAAGATGGTTTCTTCAGATGAAGCAGAGGATTGCTTAG TGTTTGAATAAGATTATTAAAAAAAACTGCATAAATGGCTTCTTTGTATTTTACTACCTTTTGAAGCTATATTTTCATCTCTGATTCAGATTTGATAATC TTCATTCAGGTGGAAGATAATGGTCTCAGCAACTGTTCCTTTCCTTTTATAGTTGCAGAGCATGAAATTTGTTTAGAGATCTGTAAGCTGGATTATGTGA TCGAGGCAGCAGAGGCTGCCGCCGATGACATCCAGATAAAAACTAAACTGATGGAAGAAAAGACACGAGCGCTGTATTTCATACAAGAAATGGGTTGGCT CCTTCATCGATGTCGAGTGAAGGTTAGGCTAGGTTCGATGACACCTGTCCAAGATCACTTCCAATTTAATCGATTCAAGTGGCTTGTTGGCTTCTCCATG GACCATGATTGGTGTGCTGTGATTAAAAAACTCTTGGACATTATTTTTGAGGGTGTTGTCGGCACGGGAGAGCATACCTCCGTTGAGCTTGCATTGTTTG ACTTGGGTCTTCTACACAGAGCAGTAAAGAGAAGCTGCAAACCTATGGTGGAACTACTGTTGAGATTTGTGCCGGTTAAAGCTTCAGATGGCAGACACAG AAAAGAGACGCAAGTCGACAAGTCTCTTGACGGATTCTTATTTAGACCTGATGCTGTTGGGCCGGCTGGGTTGACTCCCCTTCATGTCGCGGCAAGTATG AACGGATCAGAGAACGTATTGGATGCATTAACTGATGATCCAGGAATGGTGGGAATCGAAGCATGGAAAAGTGCACGGGACAGTACAGGTTTAACACCAT ACGACTACGCGTCCCTCTGTGGCTACTACTCCTACATTCATCTTGTCCAGCGGAAAACACGAAAGAAACATGAAAATCAACACGTGCTTGATATCCCTGG CACCCTTGTCGATTGTAACATAAAGCAGAAGCAACCAGACGGGCATAGGTCATCTAAAGTTTCAAGTTTGCAAACTGAGAAGATTGAAACCACGGCAACG GCACATCAATGTGGGCAATGCCAGCGCAAGCTGGCATACGGCGGTGGAACGAGAAAGGCGGCACTGGTTTATAGACCGGCAATGCTGTCAATGGTGGCCA TTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCAAGAGTGGATTATGTGTTCCAGCCATTCAGCTGGGAATCATTGAAGTATGGGTC AATGTAATGCACTAGGCTTGTACTTTTTTACTATGAAAAAAGCTAACTTTTCTTTGTGAAGTGTGGAAGTCTTAATTCTGGGTATATACATGAATGATAG AAGCTTTTAAGCTCAATGTTCACTATGCTATCTATCAAATGTTGGGTATATTATGTTATTATTTAGGTCATGTATATGTAATGTTAGGATAAGATTGGCC ACATTTAGAAGGATCCTTTGTATCAGTCAATAACAATAATCAAGCCTTTATCTTACTAGGTGGAGTCGGGTTCTTTGTGTTAGTCGATAAATATTAAAGG TTTACTATTTTTCAAGTTATCATGATTTGTTGATGTTGTTTATGAAAGATAGATGAGTTACCAGTTTTAGTAGGAGACCATTGATGAGGGAATTATATAA TTTGGGAGAGATTTAAGGTTAAACTTTGGTGTGGCCTTTGTATTTCTTCCCATTGGATTATGTATTGGAATTTATGTAAACAATGGTTTTATGATTTTAC TTTATTTATGTGTACTTTCTATTAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_63616; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11017
Blastp | Squamosa promoter-binding-like protein 12 from Arabidopsis with 45.18% of identity |
---|---|
Blastx | Squamosa promoter-binding-like protein 12 from Arabidopsis with 45.02% of identity |
Eggnog | Squamosa promoter-binding-like protein(ENOG4110DQF) |
Kegg | Link to kegg annotations (AT3G60030) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414799.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |