| Id Trinity | FTRINITY_DN56841_c2_g1_i34 |
|---|---|
| Name Transcript | Ll_transcript_11019 |
| Sequence | CTTGCTTATTTTGTTGTTTTTAGAATGTTGACAAATTCTGAAAGTTGTTTTAACAGAGAGAAGTTTGCACTGAAAAGATTCCTATAGTACACCAAAATTA AGAGAGAGAAAGACACACACTGTCTCAGAACACAAACACCATTTCCTTTCATCACATTTCTTCCTACCCTTTTCCTAATTTCCCTTTCTATATTTTCTCT CTCCTCTTCTGCTCTTCTCAACTCCCCTTCAATTCTTATTCAACCCTCCTTGCTTTTCCACATAAAAAAAATCAACTTTTACATTATTGGGCTTTTGGGT CATGTGAAATCATGCTGCAAGTTTCAATTTTGCAATTCTAGGTTTTGTCTCTATGATTTCAGTGTGAATTTGGAATCTGGGGTGTTTGTTAATTATGCTG GAATTTTTTTGATTCATAGAAGCTAAATTTGGGTGAAAAAATTAGTTTTTGTTTGAACCAATGGTGCCAGAGATGAAGGCTTTTGGGAAGAGAAGTTTGG AGTGGGATTTGAATGATTGGAAATGGGATGGAGATCTTTTCACTGCTACTCCATTGAATCCAGTGCCATCAGATTGTAGGAGTCAAAAGCTGTTCCCAAT TGATCCCGAAATTCCTACAAATGGCGATAGTTCTAACAATTTCGCTTCTCATTGGGACGGTATCGAACCCGGGGAAGGAAATAGTGGATTGGAGAAGATG AGAAGAGGTGTTGGTGGTGTTGTTGTTGCTGAAGGGGTGGAGCTTAATAATGAAGGTAATGGATCCCTTAATTTGAACCTTGGGGCTCAAGTATACCCAA TTACGGAAGGAGAGGAAACCGGTGGAAAGAAGATGAAGATAACTGGGACTAGTTCGACTTTGAACCGCGCTGTGTGTCAAGTGGAAGATTGCAGGGCTGA TCTTAGTATTGCAAAGGACTACCACCGTCGCCACAAAGTTTGTGATGTGCATTCTAAGGCTAGCAGGGCACTGGTGGGGAATGTTATGCAGAGGTTCTGT CAACAGTGTAGCAGGTTTCATGTTATTCAAGAGTTTGATGAAGGGAAGAGAAGCTGTCGTAGACGTCTGGCAGGTCACAACAAGAGGAGGAGGAAAACAC ATCCTGATCCTACTGTAGCTCATGAGGGATCTCTAAATGATGAAAAGGGTAGTAGCTATTTGTTGATGAGCCTGCTGAGGATACTGTCCAATATGCATTC AAATAACTCAGATCATACAAGAAACCAGGATGTTCTCTCTAATCTGCTGCGGAACCTGGCAAGTGTGGCAGGTACAATTAACGGAAGAAGTATAGCATCC TTATTGGACGAATCTCATGATTTGGTAAAAGCCGGGACATCTGCAGCTGCGCAGAATGTTCCAAACACAAATTCAAATGGTCCAATCCATGAGGATCCTC CTAGGGTGCAGTGTGAATCAGTGCCTGCTTATGATATGTCACACAAATGTATATCTTTAGGTAACGATGGTATAGGGAGTTCGAAACCTCCTTCGGGACC ACAGTCCTCAAGTGTAATTCGGTCAAGGGATAGTGTTCCACCTCAATCAGTTGCAGCAGAGACGACAGTTCGCAGGAATGGCTTAAACAACATTGACCTG AATAATGTATATGATGACTTGCATGATAATATCGAGAACCCCTGGAATTCTTGTACTCCCGTGCCTTCAGGGATTGGTTGTCTTGATCATCCTGCATGTG TACAACGTGACTCTCTCAGGTCAAGTCCACCACAGACAAGCAGAAACTCAGACTCCACCTCTACCCACTCACCATCTTGTTCTAGCGGAGAAGCTCAGAG TCGTACAGATCGAATTATTTTCAAACTCTTTGAAAAGGATCCTAATAATTTGCCCCTTGTTCTCCGGTCACAGATCCTTAACTGGTTATCTCACAGCCCC ATGGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTGACCGTATATCTCCGTCTCGAAAATTCTGCATGGGAGGAGCTATGCTACAATCTCGGGT CCAGCTTGAGAAAGCTTCTCGCTGCATCAAATGATTCTTTCTGGAGAACAGGATGGGTATATGCAAGAGTGCAGCACTCTGTAGCTTTTCTGCATAATGG TCAGGTAGTGGTAGATACATTGCACCTTAAAAGCCGGCAAAATTGTCAGATTTTGTGCATTAAACCACTTGCTGTTTCATCAAGTTCGAACGCTCAATTT ACTGTGAAGGGATTCAACCTTTTCCTGTCTGGCACAAGGTAAATCTCTATGCACCTTATATTTATTGAGTTGAGAGGTTTTAGCTCCAAAAGAGCATAGG CAGAAGCTTATGTTGAGGTATATCATACTTCTGGGTGGGTATGCAATTTCGTAAGAAATATTGAGAAAAGGCAGACGTAAAAATGATCACTGTGTGGTTG GACCTTATTTTCTTCCTTACAACTCCCCCGAAATGCGTAATCTAAACGCCATAAGCCTCCAGATTCATCCCCGGATAACATGACTAAATAAGATTTTGAC TAAAAGGAAGACATATGATCGATATTATACACTATTTTTGCAGCCACTAAAGCAATTAGAATGGGTGTGTCCAAGGTATAACTTCGATTCTCTTTTTTGT GTGCCCAGAAGTTAATCTTTCATTTGATTTCAGGTTGCTTTGTGCACTTGAAGGGAAGTATCTGATACAGGACAGTTATGATTTTATCGAAAATGCTGAC ACAGCTGTTGAACATGATGAAATTCAGCAAGTCAACTTCTCTTGTCACGTTCCAAACGTGTCTGGAAGAGGGTTTATTGAGGTTGTATCCTACATGCACA AAATTTTCTAAACACTTTTTGCCCTGGCCTTCTTTTCAGAAAAGTGAAATTGGCTTCAAGTTCATTAAGAAAATTGTTTTCCCCGCATCATAAATTTCTT TAATTTAGCTTAAGCTCACCAAGACCGAGGTGATTCTATATTTGCTTTATTGCTGCCTGCCATTTGGATTTGGTGCTTTAGCTTTATAAAACTTTAAGTT GATCATAGTCCTATATAATTTTAGGTTTTCATGTAAATTGTTATTGAAAACCAATCGTTATAAACGAGAGTGAGTGCTAAGTTTGACCCCTCACCCCCTT ATTCTTAGACCTTGAATTATATATAATTTGCATGTTTTCGGTGAAACTAATTACACCGAACTAAAATAAAGGCGGCCTAGTTCACGAAGCTCAGAGATGT TTTATAAAATGATTTAAGAAATGGCAGAACAGATGCAACCTATCCCTGGATAGGATAAAGATGGTTTCTTCAGATGAAGCAGAGGATTGCTTAGTGTTTG AATAAGATTATTAAAAAAAACTGCATAAATGGCTTCTTTGTATTTTACTACCTTTTGAAGCTATATTTTCATCTCTGATTCAGATTTGATAATCTTCATT CAGGTGGAAGATAATGGTCTCAGCAACTGTTCCTTTCCTTTTATAGTTGCAGAGCATGAAATTTGTTTAGAGATCTGTAAGCTGGATTATGTGATCGAGG CAGCAGAGGCTGCCGCCGATGACATCCAGATAAAAACTAAACTGATGGAAGAAAAGACACGAGCGCTGTATTTCATACAAGAAATGGGTTGGCTCCTTCA TCGATGTCGAGTGAAGGTTAGGCTAGGTTCGATGACACCTGTCCAAGATCACTTCCAATTTAATCGATTCAAGTGGCTTGTTGGCTTCTCCATGGACCAT GATTGGTGTGCTGTGATTAAAAAACTCTTGGACATTATTTTTGAGGGTGTTGTCGGCACGGGAGAGCATACCTCCGTTGAGCTTGCATTGTTTGACTTGG GTCTTCTACACAGAGCAGTAAAGAGAAGCTGCAAACCTATGGTGGAACTACTGTTGAGATTTGTGCCGGTTAAAGCTTCAGATGGCAGACACAGAAAAGA GACGCAAGTCGACAAGTCTCTTGACGGATTCTTATTTAGACCTGATGCTGTTGGGCCGGCTGGGTTGACTCCCCTTCATGTCGCGGCAAGTATGAACGGA TCAGAGAACGTATTGGATGCATTAACTGATGATCCAGGAATGGTAATTCATTTCTCTTTTGCATGCATTATAAAATTTTCACACTTCTAATCTCAGTAGG CGAGCTCTTATGCAGGAAAGCTTGTATGATTCTCGGTACATTGTCAATCCTTACCCGAAATACTTATTGAAGGATTTATCATATGTTTTGCCCCTATGTC TGCCATGTTCAGGTGGGAATCGAAGCATGGAAAAGTGCACGGGACAGTACAGGTTTAACACCATACGACTACGCGTCCCTCTGTGGCTACTACTCCTACA TTCATCTTGTCCAGCGGAAAACACGAAAGAAACATGAAAATCAACACGTGCTTGATATCCCTGGCACCCTTGTCGATTGTAACATAAAGCAGAAGCAACC AGACGGGCATAGGTCATCTAAAGTTTCAAGTTTGCAAACTGAGAAGATTGAAACCACGGCAACGGCACATCAATGTGGGCAATGCCAGCGCAAGCTGGCA TACGGCGGTGGAACGAGAAAGGCGGCACTGGTTTATAGACCGGCAATGCTGTCAATGGTGGCCATTGCAGCTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63616; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11019
| Blastp | Squamosa promoter-binding-like protein 1 from Arabidopsis with 47.37% of identity |
|---|---|
| Blastx | Squamosa promoter-binding-like protein 1 from Arabidopsis with 45.13% of identity |
| Eggnog | Squamosa promoter-binding-like protein(ENOG4110DQF) |
| Kegg | Link to kegg annotations (AT2G47070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414799.1) |
| Pfam | SBP domain (PF03110.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |