| Id Trinity | FTRINITY_DN56855_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_11085 |
| Sequence | CTCTTCAAGACGTAGGATATTTTTTTTTTTTTTTTTTATACTTGTTATCTGAAACGGTAAGCTTGTTGCTTAGTGACTACGAGGTTACGAGTTCAAATTC TGGAAACAACTTCTCCGTTTGCGGGGCAAGGTTACGTACATGTACCCTCCCCAGACTCCACTAAGTATGAGTCTCGTGCACCGGGCTGCCCCTTTTATTT ATTTATACTTGTCATCTGAAATAGAATTTTTGAAGTACTTTGGGATGCTTAGACATCCAATGCATGTATCATGCTAACTGCCTATTGTTATTTAAGTGTA AACTAATTACACTTCAAAACTTGTATTTCTGTAGTTCTTTGTCAAGATGGCATCCGTTCATGCTAATGTGGCATCGATTGTATGCAAGAATGGTAACAAT GGTTGTCAATCGAAGTTCCCGAGTACTGCATTCTTGCCTGGATTTGATGTTGTAGGGAGGGTTTCAAGTGCATGGAAGAAGGAACTTACCCCATCTTACA TGGCTTTGGGACCTAAAGCTACATTAACATTTGATCCTCTTGCTACCAATTCAGACAAAACCAAACAGAAGAAAAGTACTGTTGACCCTGCTTCTCCTGA TTTTCTGCCTCTTCCTTCCTTTGAACAATGCTTTCCAAAGAGCACAAAAGAACACAGGGAAGTTATTCATGAAGAAACTGGCCATTCGCTAAAAGTTCCC TTTCGACGAGTTCACCTGAGTGGAGATGAACCACAGTTTGATACCTATGACACAAGTGGTCCTCAAAATATAAATCCCAGAGTTGGACTCCCGAAATTGC GCAAAGACTGGATTGACAGGCGAGAGAAAATAGGTGCACCAAGATTCACTCAGATGTACTATGCTAAGCAGGGAATCATTACTGAAGAGATGCTTTACTG TGCCACTCGTGAGAAGCTCAGCCCTGAGTTTGTGAGGTCAGAAGTTGCTCGTGGACGGGCTATCATCCCTTCCAACAAGAACCACTTGGAGCTAGAGCCC ATGATAGTTGGAAGAAACTTTTTGGTGAAAGTAAATGCAAACATCGGAAATTCTGCGGTTGCAAGCTCTATAGAAGAAGAAGTTTACAAGGTTCAGTGGG CAACTATGTGGGGAGCTGATACAGTCATGGATCTCTCAACTGGTCGTCATATCCATGAAACTCGAGAGTGGATCCTACGCAACTCTTCTGTACCAGTTGG GACTGTACCTATTTATCAAGCACTTGAAAAGGTTAATGGGATTGCTGAAAATCTTACCTGGGAGGTCTTCAGGGATACCCTGATCGAACAAGCTGAACAA GGTGTTGATTACTTCACTATCCATGCAGGAGTTCTTCTGAGATATATTCCATTAACAGCGAAGCGCATGACTGGTATAGTCTCTAGAGGAGGATCTATTC ATGCAAAATGGTGCTTAGCTTATCATAAGGAGAACTTTGCTTATGAGCATTGGGATGACATACTTGATATCTGTAATCAGTATGATGTGGCCTTATCGAT AGGCGACGGGCTACGACCTGGATCAATTTATGATGCCAATGACACAGCTCAATTTGCGGAGCTCTTGACACAGGGAGAACTGACCAGAAGAGCATGGGAA AAGGATGTACAGGTGATAAATTCATCAAACTTTTTTTATAACACGGTGTTGATAAATTTATGGCAAGATTGCAGTATGGTGATAACATGATCTCTATATA TCTATTAAGTGCATTTATATTTTCATTCTTGAATCTTGATTGTTTAGCATGAACAGTTTGGAACTTGAATAGGGGTAATTTGTTTGTTTTAGTCACTTGG GTAGGAGTAGACTATTTATCAACTGCGTGAGACTGTGAGCTGTGTTAATCTCACCATTGCTATGATGATTGGTGCTTAGTTAAATTCCTAGTTGCCTTCA TTACAGATTAAACATACTTTTCTATGGTTTGGAAAGAATTTAAAATGCAATGATTCTATTGATTTATATTAAACCATCATGAGCTGATGTGATGTTACAA TGAACAATATTATCCGGAGAAAATGAGTTATTTTGTTTACTTGGACTCCTTTTACAGGTGATGAATGAAGGACCTGGACATATCCCAATGCACAAGATTC CTGAAAACATGGAAAAACAACTAGAATGGTGCAATGAAGCACCATTCTACACTCTTGGTCCTTTAACAACTGATATTGCTCCTGGTTATGATCACATCAC CTCTGCAATTGGTGCTGCCAATATTGGGGCACTAGGTACTGCTCTTCTCTGTTATGTGACTCCAAAAGAACACCTTGGATTACCGAACCGGGATGATGTG AAGGCTGGAGTTATAGCTTACAAGATAGCTGCTCATGCTGCTGATTTAGCCAAGTGTCACCCACTTGCTCAAGCCTGGGATGATGCACTAAGCAAGGCGA GATTTGAATTTCGATGGATGGACCAATTTGCTTTGTCATTGGATCCAATGACAGCCATGTCCTTCCATGATGAAACATTGCCTTCGGAAGGTGCTAAGGT GGCCCATTTCTGCTCTATGTGTGGCCCTAAATTCTGCTCTATGAAGATAACCGAGGATGTGCGCAAGTATGCAGAAAAGCATGGCTATGGTGATGCTGAA GAAGCCTTAAAACAAGGGATGGAGGCTATGAGTGCTGAATTTCGAGCTGCCAAGAAAACTATCAGCGGTGAACAGCATGGTGAAGCTGGTGGAGAGATTT ACTTGCCAACAACTTACTTAAGCTCCAAAGAGAGGTGAAGTTAAGTGTGCTTTATTTTTACTTATCTAAGATGCATCTTTCTACTTGACATGTGTTATAA TGGCAATCTGTGAATGATGTCTCCATGAATCGGCTCGGTTGGCAGAGCCGTGGGACATAAAGTGTGAACACCTGAGTTCAAACAGCAATAACCCCCTTCC TCTCCCCGTCTAAAACTTTGCCTATAAAAAGTTACTGTTTAGGATACTTAAGCACCTACTAGATGATCTCCATATAATATGGCACATTATTCCATTAACA ATGGTCCTCTCTTAACATGGAGCACAACCACATACAGTAGAATCCTTTGATTTCTTTAAGCTATAAACATATACTAGAAGATGAAGTGATCAGCTACAGA CACTATGTCTCATTATTGCATGAAAAAGATTGAAAACCATATTTTATATGCTTTCTGCCTGTCAATACTGAGTTATCTTCCAAAAACATCTCTTGCAGTA CCATCTGAGATAACTTGGAGCTAGCTACACAACTGGATTATCTGGATGGTGAATCAATTTCAAGCTAGGGGAGAATACAAATATGAGTTTGCTGGCAACT TTTAAGAACTTTAATCTTTATCAAACTTTTCTGGTGTTCTCCAATTGTCAGGAATAAATTGCTCCAGTTTTATATTTAAGACCTTCTTTATCTATTATTT TGAGGCATTTTATTAACTCCAAATGCACCAGGGGTGCCTCTATCTGCATGAGCTCCTAAGATTAAGTTAGGATGCTAGCAGATTAGGCTGAGACAGTCCC TTTGAACCTGAACAGGGTGATGCCTGCGTAGGGAGTGTGCAATTTTTTTTCTGTATGCTTTTGCAGGGAGTGTGAATTATATACATGGATTGAGCTTGGA TTGTTCTTGGGAAGCAGATTCAGCAAGATGGCAAAAATGTAGCTGCACAAGAAGCTCCTACTACCAGATAATAAAGTAATGCAACATAAATTCTTTTCAA AGAAAAAACAACATAAAGTACACAATCTTACTTACTGATTTATATTATGAAAGATCAAGTTTTCACTAATAAAACTACTCACCATATTAATTTGGCATGT CAAAATATATGAACATAGTATCTATGATTTTTCTTTTGTGCAACAAGATAGATTAATCTATTGGGAAACACAGACATTATCAAAGTAAATTTTGTCACTT TATTAGTTCTAATCCATCCTATCTTGTTTAAGGAAATCTATCAGAGTTATTTTACTGTAAATCTATATTGTGCATTAACTTTCAGCAATAGTGCTGAGAT AAAAATAAAAAATCCATTTTTGTTATGACCAAAAAAATCTCATATTTCAATCCAACATAGCTTCATAGATGCATGGGAAACAAAAAGCTAGTCTTTTACC TGGGCCATTATGTATTCTACTTGAAGTTTTCTTATTAGGAAGTGAGTGAAGATGTTTAGATAAGATTATATAATGTTTTCATTACTTCTCTATATGGATG AAATTTTGCACTCTCTGAAGATTCACAAATTCTCACCACATGAAGGATTGGTTCAATGAAGTTGCTTGGCACAGGTTGTTTTATGTTATTACTAGCTTGT TACAGTACATATCATTAACTAAACTTTTGTTTTGTATGTCAATAACCACTAGAGTGAAATTGGTGTAAGCAAAATGACTACTACTATCATTCTTGAATAG AAATAAGACTTTGTAAACAGTCTTCTTTCTTCTGTGGTTCTGTTGAAATTTAATCTGCATAAAGAGTTACTCATTATTGTTGGAGTTACAAATATTTATA AGCCATAAATAAAAATTCCATGCCTAAAACATTACATGCACTGATGACAGTGAGTTCATATTTTCTGAACATTTAGCAAGTGGTTGCCATATTCTGATCA TTTTGCAGCAGATGATATCATGTTATCTTAGTACTATTAACTACCCATGACAAATTTCCTATCAAGGTTGAAACTTGGCCCATATTTAAGGCATTAAATC TTGTCAAGTTTATCATAATCTTGAACTTGGTTCAATTCTATCCAACTTTTGTAACATTTTCATAAATGAATTAGGGTCTAGTAAACTAACTTATGATACC TCATGATAAAGCTAAATGTATGATATGGTAAGGTCCATTTACAATGAAAACTTCTCACGCTTGTATAGATCAAAATCTAAGTGAATAAACTGAAATATAA TGCATGCATTTGAATTAGATATTTGGTATGTAGACTTTGTTCAATTCTTGGCAAACAAGCCACCAAAACCACCATCCTTCTTCTTTTGAGTCACTACCAC AGAGTTCTTGCGGCTAATGGTGGTTGCCTCCTCCATTATTTTTCTCCACCATCTTCAGGATAAGATTGGTTTATAGCAGTTGATCTTATCCTCTAGAACA TAAAAACATAGTGGTGACTTCAAAGTAGTCGTATAACAAGCGCGTCATAAATGTATGAAGGATACATGTATTTTTTTCCTTAAAAAAAATGGACATGTCT TCAACTTCTCAGTAAAAGGAGTGTGATTTAATCCAGAACAAATAGCATATACAACTGTAATATAAGGGTTTGTTTTGAAGTTGTTTAGGGGAAATAAGAG AAAATAAAGGGCTCGAGAATTATTTCACAAGTGTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63731; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_11085
| Blastp | Phosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 82.82% of identity |
|---|---|
| Blastx | Phosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 82.82% of identity |
| Eggnog | thiamine diphosphate biosynthetic process(COG0422) |
| Kegg | Link to kegg annotations (AT2G29630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455701.1) |
| Pfam | ThiC-associated domain (PF13667.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |