Ll_transcript_11086

• Id Trinity: FTRINITY_DN56855_c4_g1_i2
• Name Transcript: Ll_transcript_11086
• Sequence: TTTATATTACTGGTTTAATACTCAGATAAAGTATGTGATGATGCGTGAAACAGGATCTGCGTCCGTGTAGTGTCTCCCTATATAATTGTACATTGTATGA CACAGAATTGAACAAGAGCTATTAGTCACAGAGAGTGTCTCATTACAGATAAGCCCAAGCTTTTTTCTTAAGTTCTTTGTCAAGATGGCATCCGTTCATG CTAATGTGGCATCGATTGTATGCAAGAATGGTAACAATGGTTGTCAATCGAAGTTCCCGAGTACTGCATTCTTGCCTGGATTTGATGTTGTAGGGAGGGT TTCAAGTGCATGGAAGAAGGAACTTACCCCATCTTACATGGCTTTGGGACCTAAAGCTACATTAACATTTGATCCTCTTGCTACCAATTCAGACAAAACC AAACAGAAGAAAAGTACTGTTGACCCTGCTTCTCCTGATTTTCTGCCTCTTCCTTCCTTTGAACAATGCTTTCCAAAGAGCACAAAAGAACACAGGGAAG TTATTCATGAAGAAACTGGCCATTCGCTAAAAGTTCCCTTTCGACGAGTTCACCTGAGTGGAGATGAACCACAGTTTGATACCTATGACACAAGTGGTCC TCAAAATATAAATCCCAGAGTTGGACTCCCGAAATTGCGCAAAGACTGGATTGACAGGCGAGAGAAAATAGGTGCACCAAGATTCACTCAGATGTACTAT GCTAAGCAGGGAATCATTACTGAAGAGATGCTTTACTGTGCCACTCGTGAGAAGCTCAGCCCTGAGTTTGTGAGGTCAGAAGTTGCTCGTGGACGGGCTA TCATCCCTTCCAACAAGAACCACTTGGAGCTAGAGCCCATGATAGTTGGAAGAAACTTTTTGGTGAAAGTAAATGCAAACATCGGAAATTCTGCGGTTGC AAGCTCTATAGAAGAAGAAGTTTACAAGGTTCAGTGGGCAACTATGTGGGGAGCTGATACAGTCATGGATCTCTCAACTGGTCGTCATATCCATGAAACT CGAGAGTGGATCCTACGCAACTCTTCTGTACCAGTTGGGACTGTACCTATTTATCAAGCACTTGAAAAGGTTAATGGGATTGCTGAAAATCTTACCTGGG AGGTCTTCAGGGATACCCTGATCGAACAAGCTGAACAAGGTGTTGATTACTTCACTATCCATGCAGGAGTTCTTCTGAGATATATTCCATTAACAGCGAA GCGCATGACTGGTATAGTCTCTAGAGGAGGATCTATTCATGCAAAATGGTGCTTAGCTTATCATAAGGAGAACTTTGCTTATGAGCATTGGGATGACATA CTTGATATCTGTAATCAGTATGATGTGGCCTTATCGATAGGCGACGGGCTACGACCTGGATCAATTTATGATGCCAATGACACAGCTCAATTTGCGGAGC TCTTGACACAGGGAGAACTGACCAGAAGAGCATGGGAAAAGGATGTACAGGTGATAAATTCATCAAACTTTTTTTATAACACGGTGTTGATAAATTTATG GCAAGATTGCAGTATGGTGATAACATGATCTCTATATATCTATTAAGTGCATTTATATTTTCATTCTTGAATCTTGATTGTTTAGCATGAACAGTTTGGA ACTTGAATAGGGGTAATTTGTTTGTTTTAGTCACTTGGGTAGGAGTAGACTATTTATCAACTGCGTGAGACTGTGAGCTGTGTTAATCTCACCATTGCTA TGATGATTGGTGCTTAGTTAAATTCCTAGTTGCCTTCATTACAGATTAAACATACTTTTCTATGGTTTGGAAAGAATTTAAAATGCAATGATTCTATTGA TTTATATTAAACCATCATGAGCTGATGTGATGTTACAATGAACAATATTATCCGGAGAAAATGAGTTATTTTGTTTACTTGGACTCCTTTTACAGGTGAT GAATGAAGGACCTGGACATATCCCAATGCACAAGATTCCTGAAAACATGGAAAAACAACTAGAATGGTGCAATGAAGCACCATTCTACACTCTTGGTCCT TTAACAACTGATATTGCTCCTGGTTATGATCACATCACCTCTGCAATTGGTGCTGCCAATATTGGGGCACTAGGTACTGCTCTTCTCTGTTATGTGACTC CAAAAGAACACCTTGGATTACCGAACCGGGATGATGTGAAGGCTGGAGTTATAGCTTACAAGATAGCTGCTCATGCTGCTGATTTAGCCAAGTGTCACCC ACTTGCTCAAGCCTGGGATGATGCACTAAGCAAGGCGAGATTTGAATTTCGATGGATGGACCAATTTGCTTTGTCATTGGATCCAATGACAGCCATGTCC TTCCATGATGAAACATTGCCTTCGGAAGGTGCTAAGGTGGCCCATTTCTGCTCTATGTGTGGCCCTAAATTCTGCTCTATGAAGATAACCGAGGATGTGC GCAAGTATGCAGAAAAGCATGGCTATGGTGATGCTGAAGAAGCCTTAAAACAAGGGATGGAGGCTATGAGTGCTGAATTTCGAGCTGCCAAGAAAACTAT CAGCGGTGAACAGCATGGTGAAGCTGGTGGAGAGATTTACTTGCCAACAACTTACTTAAGCTCCAAAGAGAGGTGAAGTTAAGTGTGCTTTATTTTTACT TATCTAAGATGCATCTTTCTACTTGACATGTGTTATAATGGCAATCTGTGAATGATGTCTCCATGAATCGGCTCGGTTGGCAGAGCCGTGGGACATAAAG TGTGAACACCTGAGTTCAAACAGCAATAACCCCCTTCCTCTCCCCGTCTAAAACTTTGCCTATAAAAAGTTACTGTTTAGGATACTTAAGCACCTACTAG ATGATCTCCATATAATATGGCACATTATTCCATTAACAATGGTCCTCTCTTAACATGGAGCACAACCACATACAGTAGAATCCTTTGATTTCTTTAAGCT ATAAACATATACTAGAAGATGAAGTGATCAGCTACAGACACTATGTCTCATTATTGCATGAAAAAGATTGAAAACCATATTTTATATGCTTTCTGCCTGT CAATACTGAGTTATCTTCCAAAAACATCTCTTGCAGTACCATCTGAGATAACTTGGAGCTAGCTACACAACTGGATTATCTGGATGGTGAATCAATTTCA AGCTAGGGGAGAATACAAATATGAGTTTGCTGGCAACTTTTAAGAACTTTAATCTTTATCAAACTTTTCTGGTGTTCTCCAATTGTCAGGAATAAATTGC TCCAGTTTTATATTTAAGACCTTCTTTATCTATTATTTTGAGGCATTTTATTAACTCCAAATGCACCAGGGGTGCCTCTATCTGCATGAGCTCCTAAGAT TAAGTTAGGATGCTAGCAGATTAGGCTGAGACAGTCCCTTTGAACCTGAACAGGGTGATGCCTGCGTAGGGAGTGTGCAATTTTTTTTCTGTATGCTTTT GCAGGGAGTGTGAATTATATACATGGATTGAGCTTGGATTGTTCTTGGGAAGCAGATTCAGCAAGATGGCAAAAATGTAGCTGCACAAGAAGCTCCTACT ACCAGATAATAAAGTAATGCAACATAAATTCTTTTCAAAGAAAAAACAACATAAAGTACACAATCTTACTTACTGATTTATATTATGAAAGATCAAGTTT TCACTAATAAAACTACTCACCATATTAATTTGGCATGTCAAAATATATGAACATAGTATCTATGATTTTTCTTTTGTGCAACAAGATAGATTAATCTATT GGGAAACACAGACATTATCAAAGTAAATTTTGTCACTTTATTAGTTCTAATCCATCCTATCTTGTTTAAGGAAATCTATCAGAGTTATTTTACTGTAAAT CTATATTGTGCATTAACTTTCAGCAATAGTGCTGAGATAAAAATAAAAAATCCATTTTTGTTATGACCAAAAAAATCTCATATTTCAATCCAACATAGCT TCATAGATGCATGGGAAACAAAAAGCTAGTCTTTTACCTGGGCCATTATGTATTCTACTTGAAGTTTTCTTATTAGGAAGTGAGTGAAGATGTTTAGATA AGATTATATAATGTTTTCATTACTTCTCTATATGGATGAAATTTTGCACTCTCTGAAGATTCACAAATTCTCACCACATGAAGGATTGGTTCAATGAAGT TGCTTGGCACAGGTTGTTTTATGTTATTACTAGCTTGTTACAGTACATATCATTAACTAAACTTTTGTTTTGTATGTCAATAACCACTAGAGTGAAATTG GTGTAAGCAAAATGACTACTACTATCATTCTTGAATAGAAATAAGACTTTGTAAACAGTCTTCTTTCTTCTGTGGTTCTGTTGAAATTTAATCTGCATAA AGAGTTACTCATTATTGTTGGAGTTACAAATATTTATAAGCCATAAATAAAAATTCCATGCCTAAAACATTACATGCACTGATGACAGTGAGTTCATATT TTCTGAACATTTAGCAAGTGGTTGCCATATTCTGATCATTTTGCAGCAGATGATATCATGTTATCTTAGTACTATTAACTACCCATGACAAATTTCCTAT CAAGGTTGAAACTTGGCCCATATTTAAGGCATTAAATCTTGTCAAGTTTATCATAATCTTGAACTTGGTTCAATTCTATCCAACTTTTGTAACATTTTCA TAAATGAATTAGGGTCTAGTAAACTAACTTATGATACCTCATGATAAAGCTAAATGTATGATATGGTAAGGTCCATTTACAATGAAAACTTCTCACGCTT GTATAGATCAAAATCTAAGTGAATAAACTGAAATATAATGCATGCATTTGAATTAGATATTTGGTATGTAGACTTTGTTCAATTCTTGGCAAACAAGCCA CCAAAACCACCATCCTTCTTCTTTTGAGTCACTACCACAGAGTTCTTGCGGCTAATGGTGGTTGCCTCCTCCATTATTTTTCTCCACCATCTTCAGGATA AGATTGGTTTATAGCAGTTGATCTTATCCTCTAGAACATAAAAACATAGTGGTGACTTCAAAGTAGTCGTATAACAAGCGCGTCATAAATGTATGAAGGA TACATGTATTTTTTTCCTTAAAAAAAATGGACATGTCTTCAACTTCTCAGTAAAAGGAGTGTGATTTAATCCAGAACAAATAGCATATACAACTGTAATA TAAGGGTTTGTTTTGAAGTTGTTTAGGGGAAATAAGAGAAAATAAAGGGCTCGAGAATTATTTCACAAGTGTAAAAAA
• Tissue: flowers
• Gene name: LI_gene_63731;
• Additional information: details;

Expression of Ll_transcript_11086

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.3
• LF2: 0.5
• LF3: 0.5
• LF4: 0.2
• UF1: 0.3
• UF2: 0.5
• UF3: 0.3
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_11086

• Blastp: Phosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 82.82% of identity
• Blastx: Phosphomethylpyrimidine synthase, chloroplastic from Arabidopsis with 82.82% of identity
• Eggnog: thiamine diphosphate biosynthetic process(COG0422)
• Kegg: Link to kegg annotations (AT2G29630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455701.1)
• Pfam: ThiC-associated domain (PF13667.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;