| Id Trinity | FTRINITY_DN56868_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_10398 |
| Sequence | CTTTTATCTAACCTCTCTTTCTTACTGATGCCTTCAGCCACATCATATAATTTACATTTCACTGTTCATGTTATGAATATATTCTGTTTTCCAATTTTAT ATTATGTTTCAATTCATAGAAATGGAACGAGATTATACTTTTTTGCTTATTTTTGTTTTGTAAGGTTTTTTTTAGTTTAGTGGTAGCAGCTCAAATTTAT GGCTATGAGTCTCTGACGTCATGAGTTCAAGTTTATAGCAGCGATTCCTTTTAGGAAAATAAGAATACTGCAGACATCTCAGTAAATTCATGGGCCGAAA TGGGCCACTTGTCAAGGCAGGAGTGTTTTGTTGCTTAGTTTATGAAAACTTATATATCAAGGAAAAGAAGCACAAATCATTGTTTTTTCTTCAGTTTATA ATCTCAGAGATTATAATCTCACAATTTATAATCATAAACTAAAGATACAATCTATATCAAACACATAATATTTCGTTGTTTGGATCGTTTAAAATAAGAT GAAGTGAAATAAAAAAAATTCTAGTGGAAAATGGATTCAATTCAAGGAAACACAGTCATTTCATAGTAGCCATCATGTCCATGTTAGACATTTATTTGTA TCAGACACTTTTGGATTCTTCTAATCATAGGCTATAACATTATTTTTTCTTTTTACGCAGCCACATGTCCATGCCGTATCATATCTGTTTTTCATGCCAT ATCCTTAATACCATTTCATCCAATACCTCTATTTTTATTTGTTCTGAATTTTGAGGGGAATGAGATGGAACCATCTTATTAATTATTACTAACTTTATTC CGCTATGTTCCATCATAAAATATATGGACAATAGTTTGGTCATTTCTTTAATATTTCTTTCCATTTCAATCATCAATAAATATCCCAACATATTAGTTTA TAATCTCTGCAGTTAACTTGTTGACCTTTTATGGAATAGAAAAATTCTTAGGTAAGTCAAATTGAAAGCCGGCATGTGTTGGATAGTATTGGTCGTGTTG GAAATGTGCATGTTTTACTGATTCGTTAAGATCTCCTCTAACATGATTTGTGGTGAAAAAAGTAATTTAAGTTTCACTTGCACTTTACAGGTGATAATTT ATGCATTTCCTGTGTTAACAAGGGAGAATTGATTAATGTTGCACCAAGTAGCTGCATGATAATGTATCCTTCCTTCTCCTCTGCATAAAAAGGCTGGAGC GTTGTTATGGCGTCAAGAGTGATTTTGAAAAGGAAAAAGAGCCTCTTGAGTGCCCTTGGTCAACCAACTCACGCACGCTTTATTCTTGGATTCTCGAGTC TTGGGCATGGGCAACCATTTGAGTCTACCGGCTTAAATGGTTTGAGCCAGTTTCCCCATAATCCATCTGCAACTACTGGACATAAACCGGAAACAAATAA ATTTTCTGTCAATAAGGATGATATAGCAGCATCAAAGTTTCTCTTGCATAGTTCCTTTAGAGTTTCAACTAATCGATATAGAACTGAGAAAACAGAGTTT ATTTCACTTCAAAGATCCTGGTGGGTATCTCAATATACACGTCACATTTCCACTACTCCAGCTGATCAACCTGGACTGGGTAGTGGTAATGAGAGAAAAG AGCAATCACCTGGTAAACAGAAGAAGGAAGCTTCACCAGAGGATTGTGATGAAGCTGTTGAAGGCTTGAGTACTGTAAAAGCACAAGCTAAGGCTAAATT GCAAGAATCCCATAAGGCTGATGAACCTATTTTAAAGAGATTATGGGCCAAGATTCTAGGAATTGGTCCAGCTTTCAGAGCTATTTTGTCAATGAGCAGG GATGATTGGGCAAAGAAGTTTTCTCATTGGGGGAATGAATTGAAATCTACCCTGCAACACTACTGGTTTGGTACAAAACTACTTTGGGCCGATGTTAGGA TTAGCTCTAGATTAATGTTGAAACTTGCCAATGGAAAGGGTCTGTCTAGAAGGGAGAGGCAGCAACTCACAAGGACAACAGCTGATATTTTCCGGCTAGT TCCTTTCGCTGTATTTATCATAGTTCCTTTCATGGAGTTCTTGTTGCCAGTATTCCTCAAACTGTTTCCCAACATGCTGCCATCTACTTTCCAGGACAAG ATGAAAGAACAGGAGGCACTGAAAAGAAGGCTAAATGCAAGAATAGAATATGCCAAGTTTCTTCAAGAAACTGTGAAAGAAATGGCAAAGGAAATTCAAA ATTCACGAAGTGGAGAGTTAAAGAAGACAGCAGAAGATCTTGATGAATTTATGAACAAGGTCAGAACAGGTGCCCGAGTTTCCAATGATGAAATTTTAGG CTTTGCCAAATTATTTAATGATGAGCTCACCTTGGATAACATTAGCAGGCCTCGCTTGGTAAATATGTGTAAATATATGGGTATCAGCCCATATGGAACT GATGCATATTTGCGTTATATGCTCCGCAAAAGACTACAGGAGATCAAGAATGATGATAAAATGATTCAAGCAGAAGGTTTGAAGTCTCTTTCAGAAGCAG AGCTACGTCAAGCTTGTAGAGATCGAGGATTACTTGGATTACTTTCAGTGGAGGAAATGCGGCAACAGCTTAAGGATTGGCTGGATCTGTCTCTCAGCTA TTCTGTGCCGTCTTCCCTCTTAATTCTTTCTAGAGCATTTTCTGTTTCAGGAAAGGTGAGGCCAGAGGAAGCTGTTCAAGCTACACTCTCTTCTCTGCCA GATGAGGTTGTAGATACTGTTGGGGTGACAACTTTGCCCTCTGAAGATTCTGTTTCAGAAAGGAAGAGGAAGTTGGAATTTCTTGAAATGCAAGAGGAGC GAATCAAGGAGGAGGAAGAGAAAGAGGAAGAGGAGCAAGCCAAAGTGTCAAAATCCATTGGTACTGAAATGGATTTGGCTATGGAAGAGACAACTATTTC AACAACAAAACAAACAGAAGAAGAGGCAAAAACAAAGGCATGGGAAAAACGGGAGCAACTCTGTGAGCTCAGCCGCGCATTAGCTGTTTTGGCATCAGCA TCTTCAGTGAGCAATGAGCGTGAAGAGTTCTTGAGGCTTGTTAGAAAGGAGATAGAGTTGTATAATAGTATGGTTTCCAAAGAGGGTAATGAAGGTGAGC TGGAAGCTAAGGAAGCTTATAAAGCTGCAAGGAAGGACAGTGATTCTGCACTTGAGGCGGCTGTTAGTGACAAGGTTTCTTCAGCTCTTGCTGACAGGGT TGATGCTATGCTCCAGACTCTTGAAAAAGAAATTGATGATGTTGATGCTAAAATTGGAGATCGCTGGCGATTGCTGGACAGGTTTCTTCATAATTGCTGT TTTCTTTACGCAAACTATGATATTTTCTAACGAAAGGCAATTAGCCAAACTCTATAAAAAATCCATAAAAGGACACAGCAGGTTGCGGAGGGGACTAATT TCATTGTTATATCGTGGAACCTGTCATACAACAAATTGCTACTATTTTTTATTGGTGGCCTGTTCAGAAGAGATATTATTAAGAACTGAGTCAAAACTAT GATTCCAACTAGTTATTATTGGATAGTTCGACTTAGTAAACAATCTTCAATAGGCGTGATTCCATCAGTTATAGATTTATTTAGCATTAGAATTAGAATC GATCGTGGTTGTCAATAGGACTAGACTCCATTTTACCTGTTTTGTTGTTTCCTTTAGCAAATCAAGCTTTCCTTTTTGAGAAAAACAGCATGGCAGTAAG AAGTACATGAGATGCTTTAATCACTGCATCATACCCCTACTTTCATTAAGTAGCTCTTTTGGCCCGACTGCCGTAGCAATCATCTCCTTTAATCACTGCA TCATCCCCCTAATAGACTGATAGACCCATGTCCCCTTGGTACCAGAAGTACATGAGGAAAGATAGAAAAGTAGGCAGCAGGTACAGATTGGACATATTCA AGCCACTGATCTACAGCATAACAGTCTACCATCTGCCCACGTGGCAGTGAGAAAGTAGTGAGAAGGGAAATGCAGTAAGAGGGAGTGGGGATAAATGTGA AGGGAGCAGAGTAAAGGTAGGCAATTACTCAGTGATGGGGAGGACACACACCCTCAAAGTCTGCAGATTCTCTCTCGCTTTTTTTTTTCCAATTCAATCA AGAAAGACCTATCCCTATGGTAAGGATCTAGAGTCCATTTTTCTTGAGTAAAATTTATAGTGCCTATCTTACACGAAGTAAGATATTGCTGGTATCATGA TAATTAAGATTTGCAAGGCTTTGACTTGCTTTAGACTGGTAGTGTCTGTTAAACAGTTCATATTCTGGCTGAAAATTAGGAAATACATCTGATCTATGAC CCAGTTGATGGCAATCAGCAATCTAATAATCTTGAGTTTTAACTCAACATTTTAGCAACTATGTTGCCCCACTTCCCAATTTGAATGATGAAAGAAAGGA GGTTAGTATCTCTGTGAAATATTTTCACATCCTGTGAAACAAATACTTATTAATACCCACAGGATTTGCTAAATCCTATTTCACTTTCAATTTTTTAACA GAGAATGAAATTTTTCACGTTCTTTGAAATAACTACTACATACATACCCGCTATGTTTTCCTAATGCTTTTGCACTTTCATGTTTTCACTGAAAATGAAT CCATCATTTGGGAGCCTATTGATGAGTAAACTTCCTAATAATGATGTGTAGCCATATTCTTCTGGTAGGGATTATGATGGGAAAGTGACTCCTGAGGAGG TTGCTTCTGCTGCTATGTATTTGAAGGACACTCTTGGCAAAGAAGGAATTCAAGAGCTTATCAGCAACCTTTCCAAGGATAATGGTCAGTTTGTTATGTC ATGTTTATCTTTTTTCTCACACTGCCCCAATAGGATATCAATTATCACTTACGATTGTCATGGATGTGGCCCGTCCGGGGAATTCATCCAACAATTTAAC ACTATAAACTAAAGAGGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63838; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_10398
| Blastp | Mitochondrial proton/calcium exchanger protein from Gallus with 47.34% of identity |
|---|---|
| Blastx | Mitochondrial proton/calcium exchanger protein from Gallus with 48.43% of identity |
| Eggnog | Leucine zipper-ef-hand containing transmembrane protein(ENOG410XRSP) |
| Kegg | Link to kegg annotations (422898) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449919.1) |
| Pfam | LETM1-like protein (PF07766.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |