Ll_transcript_10422

Id TrinityFTRINITY_DN56868_c1_g1_i12
Name TranscriptLl_transcript_10422
SequenceGCTTCAACTTCGCACAAGAAGAAGAAGAAGCCGCAGACACCATGGTGAAGTATTCAAGAGAACCAGACAATCCCACCAAATCTTGCAAGGCTAGAGGTGC CGACCTCAGAGTCCATTTCAAGAATACTAGGGAGACTGCCTTTTCCATTAGAAAGTTGCCCCTGGTTAAGGCCAAGAGGTATTTGGAGGATGTTTTGGCC CACAAACAGGCCATTCCATTCAGGCGCTTCTGCCGTGGTGTTGGGAGGACTGCTCAAGCAAAGAACAGACACTCTAACGGACAAGGACGCTGGCCTGTCA AATCCGCTAAGTTCATCTTAGATTTGCTTAAAAATGCTGAGAGTAATGCCGAAGTATGTCTGTTAAAATGTGTTCAATTTTATTTCTTCAACTTGAGGCA ACTTTGTAATCATTTTACTTCAATTACTTCTATACAGGTGAAAGGTTTGGATGTGGATGCTCTTTACATTTCTCACATCCAGGTTAATCAAGCACAGAGG CAGAGACGGCGCACATACCGTGCTCACGGAAGAATCAACCGTAAGTTTTAATCTATGCATTCTGGCTTTAATGGATGGTTATTACTTGGTTATATTGATG GTATTTTTTGTTCGTAGCCTACATGTCATCTCCTTGCCACATCGAGCTGATATTGTCTGAGAAGGAAGAACCCGTAAAGAAAGAGCCCGAGACCCAGTT BLAST
Tissueflowers
Gene nameLI_gene_63839; 
Additional informationdetails; 

Expression of Ll_transcript_10422

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_10422
Blastp60S ribosomal protein L17-2 from Arabidopsis with 74.7% of identity
Blastx60S ribosomal protein L17-2 from Arabidopsis with 74.7% of identity
EggnogThe globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (By similarity)(COG0091)
KeggLink to kegg annotations (AT1G67430)
CantataDBLink to cantataDB annotations (CNT0000618)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019414713.1)
PfamRibosomal protein L22p/L17e (PF00237.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;