| Id Trinity | FTRINITY_DN56878_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_8649 |
| Sequence | ATCACATCACAATACACATTTTTTAAGCTTACCGTTAAAGAAAAAACATAACTTCATCAGCGTAAGCAATATTTTAAGGAAGAGAAAAGTGAGTTAAAAG CGATGGAAGGGAAAGAAATTCAAAAGCATTGATTCAAATGGATAATGCAGCGATTCCAATACCAATCATTTACATGTTGAAGTACACGCAATGAAAAAGC CAACAATTCCTCCAACACAATACTAAAATCTATTAATCAATTTATAATCACAGGCATCATCATCACCAACTCAATTACAACAAGACTAAGAAGAAGAAGA AAAATCTGATTTTTCTGAAGCTCTTCAATCACTTTCAACAAAAAATCCAACCTTCATTTCTTTCTGGTGAAAGAAGGACTCTAGTTATGGGAAATCAAGA ATCAACTTATGAATATCATGATGATTTTTTCCAACAACCTTATTCATGTTCTGCCAGTTCATGGAACACTGGTTATCATGAACCATTTTCTTATGCTGAG AGTTCGGTGAATACTAGTTATCAACACAAGCAGCTACCAACATATATAGCTGACAATTTCACTTCATTGGATCAGGTTGTTTCTGCTCTGAGAGAAGCTG GCTTGGAATCTTCAAATTTAATACTTGGTATTGACTTCACCAAAAGCAATGAGTGGACAGGCAAACATTCCTTCAACCACAAAAGCCTTCATTCTATTGG AAACACTCCTAATCCATATGAGCAAGCAATATCTATTATTGGCCGTACTCTCTCTTCATTTGATGAAGATAATCTGATACCATGTTTTGGATTTGGTGAT GCATCTACACATGATAAGAATGTGTTCAGCTTTTATCGTGATCATCGCTCTTGTCATGGTTTTGAGGAAGCACTTGAACGCTACAGAGAAATTGTTCCAC ACTTAAAATTGTCAGGTCCAACTTCATTTGCCCCTGTAATCGATGCAGCAATTGACATTGTGGAGAGAAGCAATGGTCAATACCATGTTCTTGTCATCAT TGCTGACGGACAGGTTTTATCTCTTCACCTTATCCCATTCATTTTATTCATGGCATGTCTTAACTGTCTTTTTATAACTGCTTCTGTTTCTGGAATATCT TGTTTTTCATGGTTACTTTATAGGTTACTAGAAATTCAGATACACCACATGGAAAGCTTAGTCCACAAGAACAAGCAACGATTAATTCTATTGTTGCTGC AAGTCACTATCCTCTCTCAATTATTTTGGTTGGGGTTGGAGATGGACCATGGGATGAAATGCAGCATTTTGACGATAACATCACTAAGCGCTTATTTGAC AACTTTCAGGTACTTGACATATGCATGCATATAGTTTCCTTGAGTTTGTAACTAGTATTGTTTAAGATAGAGGTAAACATTTTCTTCACATAATTAAAAT TTTAAAAGCCCTTTCGGACCTTCTCCAGGACTTGTTCTGTGAGAATACACATTGATGGTATGTGACTTACGAGGACTGCGAAAATGTTCAGTCTTCTATA TCATTCTTAAGTCGGATATTATGAGTTTCTGCACTACTTTAATGTAAATTTCTTTTTAATACTTTTATCGTGGATATATTAGCTACTTTGTGTTCCTTTC CGCCTCTCCAGTTTGTGAACTTTACGAAGATCATGTCTGAGAACAAAGAGGCATCAAAGAAGGAAGCAGCATTTTCACTTTCCGCCCTGATGGAAATTCC AATTCAGTACCGGGCAGCCCAAAATCTACAAGTTGCTAGGTAAGCCATGAACTATACATATATGATAGTTCTAAATTAAGGGATAACTATTTCAAAATCT TGAGTGCAGTGGAGAATCAGTACATTATCAACGTAAAAGGCCTATGCCTCCACCTAAAGAAGTAATAGATCATGACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_63922; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_8649
| Blastp | E3 ubiquitin-protein ligase RGLG3 from Arabidopsis with 73.03% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RGLG4 from Arabidopsis with 62.9% of identity |
| Eggnog | copine family(ENOG410XPC8) |
| Kegg | Link to kegg annotations (AT5G63970) |
| CantataDB | Link to cantataDB annotations (CNT0001273) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464676.1) |
| Pfam | Copine (PF07002.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |