Id Trinity | FTRINITY_DN56879_c0_g2_i10 |
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Name Transcript | Ll_transcript_10766 |
Sequence | AATGGAGGGAGAACTGAACAACTTCATGATGGTATGGACCATAGCTACAGCAACGATGTGCTATTGCCACACAATTGGCAAGTTCATCTCTCATGGCAAA GCAAGACTTGTAGCTATCTTTCCAGCCATACTCATCCTCCTTCTTCTCCCTCTAAGGTTAATCTCTATTCACCTTGGAGGCCCCACTTCTTTTTTCCTAG CTTGGCTTTCCACTTTCAAGCTCCTCCTCTTTGCCCTTGGCAAGGGCCCCCTCTCCTCCAACCCTCCCCTCCCTTTCTCCCATTTTGTTCCCCTTTCACT ACTACCCATCAAATTATTCCAAACCCAACACCAACCCCACCTTTCAAACACACAAAATAGTCACACCAATCTCCCATCTGATAAGATTCCGGAAAAGGCA GATGTAGATGTAAACAACCTTACTCCTCCTGACAACAAAGATGTTTCTAGAAATATGCAAAATAGTCAAGTTACCAAAAAAGGTCACAAATCACCCCTCC ACAAAGTTTATGCCATAATGGTTTTTGTACTTGCCCTTTTGATTCCTCTATATGCAAAGAAAGAAGTTTTGCACCCAAAGTTCATATTATTCTTATACTG CCTCCACATGTATATTGGTCTAGAATTCCTTTTTGGATTGACTTCCCTATCAGCTCGAAAACTTCATGGACTAGAGCTTGAACCACAGTTCAACGAACCC TATCTATGCACTTCTTTGCAAGACTTTTGGGGTAGAAGGTGGAACCTTATGGTGAACCGTATTCTGCACCCTACCATATACGAACCCGTGGTGAATGAAT CTACACGTTTCATTGGAAGAAAGTGGGCTTCAATGATTGGTGTACTTGCTACTTTTACCGTGTCAGGGTTGATGCATGAACTAGTTTTCTATTACATAAA AAGAGAGAAACGAACGTGGGAAACGTGGGAACCATCATGGGATTCTATGTGTTTTTTTGTGCTACATGGGGTGTGTTTGGCCATTGAACTTGCACTTAAG AAGGCACTGAAAGGGAAGTGGCAGTTGCCGAGGTTGGTGTCGTGGCTGCTCACGGTGGTGTTCGTGTTCTACACGGCAGTGTCGCTGTTTGTGCCGGCGC TCGTGCGGTGCCATGTTTATGAAAAAGGAATTAGAGAGTTGAATGTTATTGCTGAGTTGGGTAAGGATTTTTATGGTCTTTTGAGGTTTGTATGATTTCA TGACTAAGGGAAATACAAATGGGTGTGGATCTGTTGTTCCGAAACTACTATGTATTAAATCAATCACAATACAGAAAAAATAAATCAAATAATAAATGTT TAATCTTTTTTAACTGATATGACATGTTGTTTTTATTGGCTTGGGACGCTAGTTGAACATCCTTGTCAACAGCTAAGAATGATCGGTTCTGTGAATGCAA AAGGGAAAGAAAGAGAAGTACAGAGACAGAAGCTCCTTGGCCCTTATTCTTCCTCCTTTCCTTTCCTGTCTTTCTTTCTTTCACTTTTATTTTCCTCTTC TTCTTTATAACCCTTCTCACTTCCTTATACCATTACATCAACCCCATTCTCTCTCTCTCTCTCTCTTCACACTCAATTTCTCAATTCATGTTCCCACTCT AATTTCAATTTCTCGATTCTCTTTTCTCTCTCTCGATTCGATTCATGGAACAACCACTCGTGACGCAAGGTGCTGCTACGGATTTTAAGGAGAAATCGCA GTTTGTCGCACTCGCTCGCGATGCTGACGTGGCGGATAAAGAGGGTGGTAGTAGTAGTAGCGTTTCGAATAAGAAACGTGGTTGTTCAGATAAGGGTACT TCCAAAACGACGTCGCTTTCTAGGCCGAAGAAGAAGAAGGAAGAAGACGAAGATGTTTGTTTTATATGCTTTGACGGTGGAAGCCTTGTTCTTTGTGATC GAAGGGGTTGCCCTAAAGCATATCACCCTGCGTGTATTAAGCGAGATGAAGCATTTTTTCGTTCAAAGGCTAAATGGAACTGCGGTTGGCATATATGCAG TGTTTGTCAGAAGGCATCCCATTATATGTGCTATACTTGTCCATATTCCTTGTGCAAGGGATGTACAAAAACTGCTGATTTTGTCAGTGTCAGGGGAAAT AAAGGCTTTTGTGGAATATGCTTGAAAACTATAATGCTGATCGAGAACAATGCCCAGGGAAATAATGCAAAGTATGAAGTGGATTTCGATGACACAAGCA GCTGGGAGTATCTTTTCAAGGTTTATTGGACATCTTTGAAAGGGAACCTATCTTTAACATTTGATGAGCTCCTTGAAGCTACAAACTCATGGAGACGTGC TTCTCTGAGTTGTAAAGTTGGAACTCCACGTGAACTTTATCATTTTAAAGATGATAAAGGTTCTGGATCTGAGAAGTCCTGTATAGACATAGAATCCAAT AATTTGAATAACAAGAAGCCTAAGAGAGGTGATGATCATATACATGTTGGGGATTGTGTCTTGAATGATGTTGGATGTCGTGCGCTGATTGGTGGTGTAT GTACACACAAGAAACAGATCGACCCTAATGATGCATCAATTGGTGACACCACTAAAATAGGAGTTGTGAGATCAGAAGCCCCCGGTGTCGCATTGGACAT GTCATCATTGCTTCTCTCTATAGGGATTGAGAAGCCACTTACTGATTCTGTGAATGATAAATTGTGGCATTATCAGGATCCAGCTGGGAGGGTTCAAGGA CCATTTTCTATGTTGCAGTTGTACAAGTGGAATGCAAGTGGACATTTCCCTTCAGATCTCAGAATATGGAGGATAGATGAGAAACAAGATTACTCTATAT TGTTAACTGATGCACTAGATGGGAAGTGTTCCAAAAGTGTGTTATTGCCACACAACAGCCAACTGCTATCCTTAGGTCCCAATGTTACTTTTGATAATAA AGATAATAGTCAGGGAAATGCAACAAGGATGGAAATTGATGCAGACAGTGAAGATGTCAAGCAGAGTGGGGAGCAAAAGGTGGATGATACTTGTACACAG TCTAATGGTAAAGACGAATCTGTTAGGAGCAATGGATGGAACTCTTATTCTTCTACACCAACAGAAGGGATCAACAATGAGGGGCAAAGTGGAAACTTTG AAAGGAGAGAGGAGTCATCAAAATACGAAATTTCATGTCACAACCAGCCCCATGTGTACCCTTCACTACCTTCTAATGCCTTTTTTGAGAATTTGAACGA GAACCCTTTGGATAAATTAAGGGAAGGCCATGGGATTGAGGCAATCCCTGAAGATAATGGAAACCATGACTTGAACGGGACTTCTGGTGGTCAGAGTAAT AGTGGGCAGAGTTATCAGAAGCAGTCAGATAGTGAAGAGAATTCAGGGCAATCTTCTGGACAGAACTGGAAAGGCCCTCAACCAATTAATCCAGTCTGTA ATGCTTCAACGTGGCTGACAATCTTTGGTGAACCTACTGATTGTGATGAATCAGTTTCAGATCTGTTGGCTGAAGTGGAGGCAATGGAGTCACGTGCTGG TGGCATAGAATCTTCCACTTCAATCATGAAAGGTGGTGAGGAGTTAACTGACAGTTCTAAAACTGATTTTCTCAGTTTTGTAGATGGGTTTAGCACAGTG TTTGATGCAGGTAAAGGTGATGCCCTGAGCTCCACAGGTGATTTACACTTACCATTTCAACCCACAGCAGCAGCGGAACCATTTCGTCAAACTGAAGTAT CATCAAAGAATATCTGGGGTGAATTGCTCAAAAAGTTCTGAAATTGAGTGTACTTTCTTATCAACTGGCTGGGATCGAAAATGTTAACGTGACAGATCAC ATTGGAGGCCATTCTTCTTATCAATGAGATACATATGGGGTCTTAGACCTGCTTTATGTGGATGGTATTATCTTGTTTAAGTGTTTATAACATTATTTTG AGGGTCTTTGTAGCCATCTGTTGCCAATTTATTAGTCTGTTATGTTATTTCATTGAACTTCAATGTGTAGAACTTCTTAGTGAGCTAGAAGGGAATGTGG ATTCCCTCAAATTTTCTATGACATTTATGGATAAGGTGTCTTCTCACCAAAATACAAATATTTAAGTTTGAACCCCCGGATTTAAAGCTATAATTTGCTT ACTGCCCAATTTTTTTAGGCCATATTTATTGGCTAAAGTTGAAATGGTGGCTTGGGTCGCATAAATCATGTGGTTCAGTTTGATACTTAGATTCATGTGT AGGGGTCTTTGCTTAAGCATTTGATTATACTTGGGAGCTCAAACTTTCCATTATTCGGTGGGAAAATACTCTTGGGGGGAATGAGCGTGTTATAAGAAAT AATCCAATTGCGATGAAGAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_63925; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_10766
Blastp | Zinc finger CCCH domain-containing protein 44 from Arabidopsis with 74.15% of identity |
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Blastx | Zinc finger CCCH domain-containing protein 44 from Arabidopsis with 74.15% of identity |
Eggnog | GYF domain-containing protein(ENOG41120EC) |
Kegg | Link to kegg annotations (AT3G51120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421712.1) |
Pfam | GYF domain (PF02213.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |