| Id Trinity | FTRINITY_DN56889_c3_g5_i6 |
|---|---|
| Name Transcript | Ll_transcript_8865 |
| Sequence | CGTTAACAACAGCATAAATCAAAGTGAGTTATACGAACCCAATATAAAACCCCAACACCGCTCTTTCTCTATTCAATGTAACATTCTCCTCTTCTCCATC ACTCACATAATTACTAGATGAATAGTGAAATCCCTAAAGCAGAAGAAATGGATGGTTCATTTGAAGATGAAGATGATTCACCTGCTGTTACAATCGGCGA GTACCTTGATGAAGTTGAGGAGCGAGAGCTGGCAGCTGATTTAGTTCTGGGCGGTGATGATGGCAAGGAATGTACCTATAGCAAAGGATATATGAAAAGA CAGGCAATTTTCTCCTGCCTCACCTGCACCCCAGATGGCAATGCTGGAGTTTGCACAGCTTGCTCATTGTCTTGCCATGATGGCCACCAGATCGTGGAAC TATGGACAAAAAGAAACTTCAGGTGTGATTGTGGCAATTCAAAGTTTGGTGACTTCTACTGCAAGATTTTCGCAGGCAAAGATGCAGAGAATGTTGAGAA CTTGTACAATCATAACTTTAAAGGTTTGTATTGCACTTGTGGTCGCCCCTATCCAGACCCAGATGCTGTAGAACAAGGAGAGATGATACAGTGCTGTCTA TGTGAGGACTGGTTCCATGAGGAGCATCTTGGTCTTGAGCTTTCGGATGAGGTTTGTGTCTTTGAATGAGGTGTTTGGGTTTCACCACTTGATATTTTTT TCAAAAATATAACCTATGGCCTTCTTGTTATGAATTGAGTTGCTAGGTTTTATGTTAGTAAATAATCCGTATTATCTTGGAAGCAAAGTATATCTATGGT TTATAAACCTACAGGTTTTCTTTCTTAAAGGCTGAATGCCTTCCTGAACTAATAGGTTTAGACTTCAGACCACCACTAACTGCATGCTTCTGTTGCCTTG AACAATTCATCTTCACAATATAAAATTTACTGGACCTTGTTAGAGAGAGGACTTGAGTTTGAGAGAGCTTACAATTTAAAATCTAAATAGTTGGATGCTA TTGGTACGGATTTTCCTACACTGATTGTGTTCTTTCCCATATATCTCTAATTGTGGTTCCTTTCTTCTAGCAGAGTATTGTTCTGGAATTGTTGGTGGTT TTTTAAAACCCTTCCCTCATCTTTCCTTCCCTAATCATGTATCTATAACGAAAGACTTTGCCCAATAAAACTCAGAACTTTAAATATAACGAAAGGAAAA TTGTGTTTGTGAGCTGTGATGTGTTTATCACTCATTATGTTTTTGGCAATTTAATTGTCTATCACTCTTTCTATACCTCAGTTTCCCAGAGATGATGAAG GAGAGCCTCTGTATGAGGATTTCATCTGTAAGGCATGCTCTGAGGTGTGTTTCTTTCTAAAATTATATCCTGGAGTGGTACGGGCTTCCGGAAAGCAGCC AGATGCTACCGTCGAAGTTAGCAAGGGTAAAGGTGTTCTGGAAGCTATGCCTCCAATGAGTGATGCCTTTTCACACAGTTCTCCTAAAATTGATGATGCA AAAGCAACTATTTCTGATGGTAAGGAGCTGCTTCAGGGAGAAAATTGTGACAACAGTAAGGTTTTAAGCCAGTGCACAAGCAGCACCAATATTCGCTGTC TCCTTGGTGTTAACATTGTTTCTGCCTCCCCAGTTTTAGATGGTAAACCAATATTCCTTTCCAAAAATTGGAGAGATGCTCTATGCAAATGCAGCAATTG TTTGGAGTTTTACAACCAGAAGCGAATTGCTTTTCTACTTGACAAGGAAGACTCAATTGTGGAATATGAGAAAATGGCCAAGCAGAAGAGAGAAGAAAAG TTGCAGGAAGCAGAGGGTGCTGAGGTAAACTTCTTTAATAATCTTGGGCACGTAGAGAAAGTGGAGATCTTGAATGGCATTGAAGAGATGAAGGACGGGT TTCGTACTTTCCTGGAATCTGCAGACTCATCAAAGCCAATTACTGAGGCTGATGTCCACCAATTTTTTGAAGAAATTAAGAAAAAGCGTCGCCGCATACA GTGAGTTTTTCTTGTCTTGCCAATTTAAGGGCATTGCTCCAAGCTTAAGTGTTTATACTTCATCTGTAGTATCTGATTTTCACAAGCCCTGGATGCTTTA TGATATTTAAAATTACAATGCTTTGCTTGTTAACTGTTTCTTTACTATGTAGACTTTGTATTTTGGTTGGCTTTGATCATGACCTAAATGCATAGGACAT ATGTTGAATGAACAACAACAACATCTGCATGGTATTTACATTTACAAACATATGTCCCTATGCATGTGACATATGTTATGTTGTGTGCAGCATCTTGCAT GCTAGATGACTTGAAGAATGAGCTTGTCTCTTTCCGTCTCTATCCCCGATAAATATATATTAAGTAATATAACTTTGTTTTTATATTTTTCTATTTGATT GAATGATGCATTTTAATTGGTCTGTCAGACATGGTGGCATGGTCTGGGATATCATATCTCCAAGCAAACGGAATAGTAGATAATATCATGTATAGAATAT TTCTATTGATAGACAATAGGATTAAGATTTAACATGTATGCACTGATAGTGTAAGTGTTTTTTACATTGTCAGCAAATCATCACCATTGATTTGTTATCC ATTATTGACTCTCAAATAAAAGTAATACAAATCAATGATTGATGATGTGCCGACAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64012; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_8865
| Blastp | Putative E3 ubiquitin-protein ligase UBR7 from Mus with 27.97% of identity |
|---|---|
| Blastx | Putative E3 ubiquitin-protein ligase UBR7 from Homo with 59.09% of identity |
| Eggnog | ubiquitin protein ligase E3 component n-recognin 7(ENOG410XSV6) |
| Kegg | Link to kegg annotations (66622) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424426.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |