Id Trinity | FTRINITY_DN56890_c0_g1_i14 |
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Name Transcript | Ll_transcript_9126 |
Sequence | GTTGTGTTGTGTTGTTGGCTTCTTCACATACATTAGGGTTTCTCTCTTCTCTTCTCTTCTCTTCTCCTTCATTCTTTTTCTCACTTTCCACTCCACTCAT TCCATTTTCTTTTCTTTTCTTTTATTTCCGTATTTGATTTTCGAATTCAATCTTCTATCCGTGCTAGGGATTTTTCGTAATTTTCTCAATCTGCTTCTTC TCTTCGATTTCAGTGTAGCTCGAAATTTGAGCTCCGTGGTGGTTCTCGTTGCTTCAACTTCATGAAATTTGGAGTCCATGGCTAGCTTTCCTGGAAATTT TGCTCCTTTAAATGGTTCTATTTATGTATGCAACTTGCCTTATGGGACTGACGAAAATATGTTGGCTGAATATTTTGGCACCATTGGATTAGTAAAGAAA GATAAACGCACAGGGAAACCGAAAATATGGTTATATCGAGACAAAGAGACTAATGAACCAAAGGGAGATGCTACCGTAACATATGAGGACCCACACGCTG CTTTAGCTGCTGTTGAATGGTTTAACAACAAAGATTTTCATGGTAGTACAATTGGAGTTTATATAGCAGAGTCAAAAAACAAGGATGAACAAGCAATTAA TCCAGTGGGTGAACCACTTGTTTCTGATAATATTGGCGTAGTAGAGGAAACTCTTGCGGATGTTAATGGGGGTAGTGGAAGAGGTCGAGGTCGAAATGAA ACTTCAGGCAAAGCATGGAAGCAAGATGGTGATTGGATGTGTACGAATACAAGTTGCAACAATGTCAATTTTGCTTTTCGTGGTGCGTGCAATCGCTGTG GTACTGCTCGTCCAGCTGGTGTTCCTGGTGCCACAGGTGGTGGTGGACGTGGCAGGGGACGTGGTGGACAAGATACGGGGAGTGCTGGTCGTCCAGGTGG TGCACTCTTTGGCCCCAATGATTGGCCTTGTCCAATGTGTGGCAATATCAATTGGGCAAAGCGGAACAAATGCAATATTTGCAACACCAATAAGCCTGGC ACTAGCGAGGGTGGAGTAAGGGGAGGGCGAGGTGGAGGTTACAAAGAGCTTGATGAAGAAGAACTAGAGGAAACTAAACGTCGTAGGCGGGAGGCTGAAG ATGATGGTGAGCTGTATGATGAGTTTGGAAATCTTAAGAAGAAATTTCGTGCCAAAGCACAGCAAACTGAAGCTCCACGAGTTCTTCCTGGTTCTGGGCG TGCTGGATGGGAAGTTGAGGAACTAGGGATTGATAGGGATGCTAGAGAAAGGAGTAGAGACAGAGGACGGGAGCATAATAATGGTGATAACAGGCACAGA GAGCGAAATGATAAAGAGAGGCAAAGAAGTCGAAGTAGAGAGAGGGACAGGGGAAGAGATCGCGACTGGGATTATGATGATCGAGGTAGAGATTATGGGC GAGATCGGGACGGAAGTAGGCGCCGTTATTGAAAATAGCAGCAAATAACACTGATTTATTGACACATCCTTGAATTTGGGTTGTGGCTTTTTATGACTGT ACTTCAGTTGCTTTATATTGAATCCTTAAATCTAGAAATTGTTAATTTTTTTGGAGTGGAAACCATTGTATTTTGGGGGACATGCTATTGCCTTTAGCTT CTTGTTTGAGATATGTATTTTGTCTCAGAATATTCCATACATCCTCTTCTAAATTATCTTTTTTTTCTTATGTGACACATGCACCTTATAACTTGTAAGC TAATTTTATAGATTTTTCTTTCTATTATTAAGAAACAACTGGTGCTTGTTGAAATAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_64018; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9126
Blastp | Transcription initiation factor TFIID subunit 15 from Arabidopsis with 71.88% of identity |
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Blastx | Transcription initiation factor TFIID subunit 15 from Arabidopsis with 66.56% of identity |
Eggnog | Ewing sarcoma breakpoint region 1(ENOG4111Q2F) |
Kegg | Link to kegg annotations (AT1G50300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420606.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |