Id Trinity | FTRINITY_DN56890_c0_g1_i4 |
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Name Transcript | Ll_transcript_9114 |
Sequence | ATAAGGTGTAGGGTGCATGTAGTGGAGAGGTATAGCAGAATTTCTAGTGGTTATGGTTGGCACATGCCATTAGGGCATCCTTCAATTTTTTTCTACATTT TTTCTGGTATTTTGTCTTTAGTCAAAGCTCTTCTCATTGCACTTTCTCTATATTGTCTTAGTGAAATATCAGTATCTATCAATTTTTATTGTTACCAAGT TTATTTATTTGGCATTGTCTGTATGAGGACTAAAACAAACAGTTAGTTTCAATTTTCCATTAACTAATTGATTTGCTACTTGTTAAATTAATCAGTTCTT TGGTTTCAATTGCTCCTATTTTCTCTTTTCCATTCCATCTCAACTCACCTCTTTTAAATTTTATGTATTACTACTATCTATGATCTGCAGAAAGATAAAC GCACAGGGAGACCGAAAATATGGTTATATAGAGACAAAGAGACTAATGAACCAAAGGGAGATGCTACTGTAACATATGAGGACCCACATGCTGCTTTAGC TGCTGTTGAATGGTTTAACAACAAAGATTTTCATGGTAGTACCATAGGAGTTTATATAGCAGAATCAAAAAACAAGGATGACCAAACATTCAATACAGTA GTAGAACCACTTGTTTCTGATAATGTTGGTGGAGTAGAGGAAACTCCTGCGGATGTTAATGGGGGTAGTGGAAGAGGTCGAGGTCGAAATGAAACTTCAG GCAAAGCATGGAAACAAGAGGGTGATTGGATGTGTACAAATACAAGTTGCAACAATGTGAATTTTGCCTTTCGTGGTGCGTGCAATCGCTGTGGAACTGC TCGCCCAGCTGGCGTTCCTGGTGCTGCAGGCGGTGGCGGTCGTGGCAAGGGACGTGGTGGACAGGATGCTGGGAGTGCTGGTCGTCCAGGTGGTGGACTC TTTGGCCCCAATGATTGGGCCTGTCCAATGTGTGGCAATATCAATTGGGCAAAGCGGAACAAATGCAATATTTGCAACACCAATAAGCCTGGCACTAGCG AGGGTGGAGTAAGGGGAGGGCGAGGTGGAGGTTACAAAGAGCTTGATGAAGAAGAACTAGAGGAAACTAAACGTCGTAGGCGGGAGGCTGAAGATGATGG TGAGCTGTATGATGAGTTTGGAAATCTTAAGAAGAAATTTCGTGCCAAAGCACAGCAAACTGAAGCTCCACGAGTTCTTCCTGGTTCTGGGCGTGCTGGA TGGGAAGTTGAGGAACTAGGGATTGATAGGGATGCTAGAGAAAGGAGTAGAGACAGAGGACGGGAGCATAATAATGGTGATAACAGGCACAGAGAGCGAA ATGATAAAGAGAGGCAAAGAAGTCGAAGTAGAGAGAGGGACAGGGGAAGAGATCGCGACTGGGATTATGATGATCGAGGTAGAGATTATGGGCGAGATCG GGACGGAAGTAGGCGCCGTTATTGAAAATAGCAGCAAATAACACTGATTTATTGACACATCCTTGAATTTGGGTTGTGGCTTTTTATGACTGTACTTCAG TTGCTTTATATTGAATCCTTAAATCTAGAAATTGTTAATTTTTTTGGAGTGGAAACCATTGTATTTTGGGGGACATGCTATTGCCTTTAGCTTCTTGTTT GAGATATGTATTTTGTCTCAGAATATTCCATACATCCTCTTCTAAATTATCTTTTTTTTCTTATGTGACACATGCACCTTATAACTTGTAAGCTAATTTT ATAGATTTTTCTTTCTATTATTAAGAAACAACTGGTGCTTGTTGAAATAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_64018; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9114
Blastp | Transcription initiation factor TFIID subunit 15 from Arabidopsis with 75.29% of identity |
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Blastx | Transcription initiation factor TFIID subunit 15 from Arabidopsis with 66.9% of identity |
Eggnog | Ewing sarcoma breakpoint region 1(ENOG4111Q2F) |
Kegg | Link to kegg annotations (AT1G50300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420619.1) |
Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |