Id Trinity | FTRINITY_DN56892_c6_g1_i4 |
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Name Transcript | Ll_transcript_10100 |
Sequence | ATTTTGGACTGATCCAAGGTAAATTTCCAATTTAATAATTGTATAAGTGTAACATTAATTTACTTACTCATGTTATGAGCTTTTCTAATGTAATGTCCGA ATATATTTCAGTGACTTCAAAGATATTTTTGACCGGAGGCATTTTATGAATGTTTTGAAAGACGACATTGAGATAATTGAGTATTTGCCTGTTAAGTATG CATCTGTGGAACCTATTCAGAAGGCCCCTGTTTCATGGTCTAAGGTATGGAAAGTAATTACTATTGACGTGCATTCAAACGATTATCTTAGTACAGTATA GGCTTAGATGCTTCATTTGCAGGCTAGCTACTACAGAGGCGAGATACTTCCATTGTTGAAACGGCATAAGGTCATAAAATTTACTCATACAGATTCTCGA CTTGCCAACAATGGTCTTGCTTCTTCTATTCAGAAGCTTAGATGCCGTGCCAATTTCCAAGCACTCAAATACACACCAGAGATTGAAGAGCTTGGGAAGA CTTTGGTAGATAGGCTTAGAAACAACAATGAACCATATATTGCCCTTCATTTAAGATATGAGAAAGACATGCTAGCTTTTACCGGCTGCACACACAATCT AACTGTTGAGGAGGCAGAGGAACTAAGGGTGATGAGGTATGAAGTGAAACATTGGAAAGAAAAAGATATTGACAGTGTTGATAGAAGATTGCAAGGAGGG TGTCCTATGTCACCTAGAGAGGCAGCCATTTTTCTGAAGGCCATGGGGTACCCTTCCACTACAACAATTTACATTGTTGCAGGACCTATATATGGAAGCA ATAGTATGGCAGCCTTTCGGTCTGAGTATCCTAATGTCTTTACACATTCCACCCTTGCAACGGAAGAGGAGCTAGAGCCCTTCAATCCATATCAAAATCG TCTCGCTGCATTGGATCATATAGTGGCTCTGGAGAGTGATGTCTTTGTTTATACTTACGACGGAAACATGGCCAAGGCAGTGCAGGGTCATAGGAGGTTT GAAGGATTTAGAAAGACTATCAATCCGGACAGGTTAGTTCACCAAGCATACATATCTTCACAAATTTACTTGCAACCAATCACATATATTACTATATGTA TGACTTTTGAGGTACTATGATAATTAAATGTTTTTAATAATTGGATGATAGGGTAAAACCTTTTATATTGACAATGCATTAAAGTTAAATGAGAAATGAT ATATCTTCATGGAAATTTTGCAACAAGTCCTTCTACTTACTCAACAACATGTCACATGTATTATTTGTAAGACATTATTAGTTAGTCATTAGTTTTGTAA CACTTTCCCTTTTTCTATGTGGCTAGGAGAGTTTCCAAGAAAATATAACATTTTCCAAACAAATATATTCCTTCCCACCCTTTTAATTGAACTTTAGGAT ATGCTACTGATATGTAACCATTTCATTTTTCAGATTAAATTTTGTTAGATTGATTGATCAACTGGACCATGGTTCTATATCCTGGGAGAAATTTTCTTCT GAGGTAAAAAATTTGCATTCAGATAGGCTTGGTGGGCCTTATCTTAGACAAGCAGGTGAGTCACCAAGAACTGAAGAGAATTTTTTTGCCAACCCATTTC CTGGTTGTGTCTGTAACAAGTCACAAGAACTAATTACAAGCCAGAAACTAGACCAAAAATTTGGTATTGAATCACAATGATAGTGTAATGGTTTTGGTAT ATATGGTTAGGCAAAAAAATGTGAGGCTCACATTATGGCACTGCCTTAAAGTTATAAATAAAGGCACCTTATTCAAGTTGTGGTGGAAATGTGCTTCCTT TGTTGGAGTTTGGTTGATGATGATAATGTGGCTGCTGAAAAATTAGTGGGGACTTGGGAATTGTTCTCATTTCATTCAATATATTGGTTTCAATTTAGAC ATACAAAAAGGGCATAGAAGGTTTATACTGGGTGATTGGCATTATAAAATTTCATTTATTGATTTTGTATTTATGGAACACAGTTGCCAAATGGAGCATT ATTGCAATTTTGAATGTAATATTTGATACATAGGAATCTAGTCTAGTGGCATAAATTTCCAACAGATACCTTGTTTATATTTATGTTGGACCGATTTATA CCATGGATTGAGTTATATCGAAAATGATAATTTAGTTAGCTTATTATTTATGTTGTTATTGGTCAGATACTTTCCTATTTTTAACAATATTTATTTTATA AAGAGGTGATTCACTTACTAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_64047; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_10100
Blastp | Uncharacterized protein At1g04910 from Arabidopsis with 37.66% of identity |
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Blastx | Uncharacterized protein At1g04910 from Arabidopsis with 33.54% of identity |
Eggnog | DUF246 domain-containing protein(ENOG410Z25U) |
Kegg | Link to kegg annotations (AT1G04910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432000.1) |
Pfam | GDP-fucose protein O-fucosyltransferase (PF10250.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |