Ll_transcript_9792

• Id Trinity: FTRINITY_DN56895_c1_g3_i9
• Name Transcript: Ll_transcript_9792
• Sequence: AAAATCTTAGCAGCCAATCACATACCCTGCTTCTTGTGTTAATCAAACGCAATTCGCTCTTCAAATTCAAAACCCCTTCTTTATCCTCCATTGTGTTCTT TTTTTGTGAGGCATATATACAGAAAAGAGATGGATGAGTGTTAGTTTCATTTCCCACTGAATGGAAACAACACTCACTCACTTCCTCTATGGCCTCCTTC CATCATCACCAAATAACTCTCACATTCCCTCCTTTTCATTCTCAACACATAACAACACTACCAATGCACTAACCATAATTCCAAACGCAACCAAAACCAA AACCCAAACTCAAACAACACTAATCAATGAACCAATTACCACACTTCATCACCAAAACACACACCCTTTGGGTTCAAACCATCTTGGAACAACCGTTTCC ACGTGGCTACGTCATAGCATGAAGGCAATGGCATCAGATTTAGCTTCAGCCGAGTTACGAACCGAGTTTCAATTCTCCGAGTTGAGGCAAAGGATGAGAC CGGGTTTGAGTTTCGTTATCGAAGCTCAACCTTATCTTAAAGCTGTTCCTTTGCCTCTTGGATTTGAAGTTCCTTGTTTGAAGGTTTGCACTCATTTTCC GACACTGTTTTGTTATTTTCGGAGAGAACTTCGTTGTGTTCTCAGTGAGTTGCAGAGTAAGGCGTTGCTTCGGGATTGGCGCCAAACTCACTCGTGGAAA TTGGTTAAAGAGATTGCTAATTCAGATCAGCATAGGGCAGTTGCAAGAAAGACAGTACAGCCGGAGATTGTCCAAGGGGTTTTAGGAATGGACTTGGAGA AGGTGAAGGCAATGCAGCAGAGGATTGATGAATTCACCAGCAGCATGTCTGAGCTGCTATGGATTGAAAGGGATTCTGAATTGGAGTACACTCAGGAGGA ATTGGATGCAGTTCCTAAACCATATGGCACTTCTGAATCATCAAAGCCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACC ATTTGCAATTTAACTGCCATCAGTACCTCTAAAGGACTTGAGGGAATGCATTCAGTGTTATTCAAGGTTGAAGGGAACCATCGGCTACCGCCTACTACTC TTTCACCAGGAGACATGGTTTGTGTACGAACCTGTGACAGAAAGGGTGCAGTTACAACTGCTTGCATGCAAGGATTTGTTGACAATCTTGGAGATGATGG CTGTACTATTAGTGTTGCTTTAGAGTCACTTCATGGCGATCCTACATTTTCTAAACTATTTGGGAAGAGTGTGCGCATTGACCGTTTTCAAGGACTGGCT GATGCTCTTACCTATGAGGTCATTTAAATCTATCATGTTACACTGGCAAAACATTTAATTTGGTCCAAGACACATTTGTGTAAAAATTATGTACCGATGA CTAACTAAGAAGTTTTGTGTACACACACTTGTGTTTAACCGAGAACAAATTAAATTCTGTGATTTCTACCAAAAGGAAAAAGAAAAGTATATGGTCAAGT AGTAGTTAGTTGACTTGAGTTATGCATTGCTATTTGATCTAGAAGGTGAACAAGTCTGATAATGATTAGTGTATTTACTGTATGGTATCAATATGCATAT GCCTTTCCTAACCCTTGAAACGGAACTATTAAAAACCAATTTGTTACTGCTTGAAAATTGATATTACAACTTACAAGATGACAATTGACAAAATAGAAAA ACTGTGGCCTAAAGTTTCAGTGTAAAACATCAAATTTTACCACTTTAAGATGGTGCTAGTGTTTCAATGCTAACTAACTGCAGCCAGAATTTGAGCACTT CTTACATCACATTAGCTTTTCTCACTTTGAATTTGTGACCATTGACATTGATCAATTCTATTTTTTCTACTTTATATTGTCTCTGCTTTATTTTAATTGT CACATTATCGTAATGCACTAAAATTAAGGTAGTTATTGCTTAGTGTCTATGAGGTCAATGATTCAAATACTGGAAGCAGCCTCTTCACTCACGGAGTAAG AGACCTCACTAGCTGAGAGTCTCATGCATTTTTGCCGCGATCAAATGTTCCTCATGGTTACATTTTTCTTCCACCTGCTACAAAAAGGATGGATATGCTG ATATGGTTAAAAGTGTTAAGTGTTAACTACCCAAAACCCACCGCCTAAGTTCTCTGCGCAACTGTGAAGCCTTAATTCTGCTTCAGAAGAATGGTTTGTG CAAAAACAATCCTTCAATTTCTATTGTGGCTACACTATTTGGAGAGAGAGAAGATGTTGAATGGCTTGAGAAGAATCATGTGGTTGACTGGGAAGAAAAA AAATTGAATGGACTATTAGGAAATGAAACCATTGATGATTCTCAGCAGAGAACAATTGCTCTGGGTTTGAATAAGAAGAGGCCTGTGTTGGTTATCCAAG GACCTCCTGGTACTGGCAAGACTGGTATACTCAAGCATCTTATAGCGTGTGCTGTTCAGCAAGGAGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGC TGTTGACAATATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTACGGGTTGGGAATCCAGCTCGTATATCAAAAACTGTGTCTTCAAAGTCTTTG GGAGATATTGTGAATGCTAAGCTTGCACCTTTTCGAGAAGAGTGTGAGAGGAAGAAGTCGGATCTAAGGAAAGATCTAAGTCATTGTTTAAAGGATGACT CACTAGCTGCGGGCATACGCCAACTTCTGAAACAGCTAAGAAGCTCGTTTAAGAAAAAGGAAAAGCAGACTATTAGTGAAGTTCTATCTAGTGCTCAGGT TGTGCTTGCTACTAATACTGGAGCAGCTGATCCTTTGATTCGAAAGCTAGATGCTTTTGACTTGGTTGTCATAGACGAAGCTGGACAGGCAATTGAACCC TCTTGCTGGATTCCTATATTGCAGGGAAAGCGTTGTATTCTTACTGGTGACCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTG GTTTAGGAATATCTTTACTGGAGAGAGCTACAACTTTGCATGAAGGGGTTCTCACCACCAGGTTAACAACACAATACCGTATGAATGATGCAATTGCTAG CTGGGCCTCAAAGGAGATGTATGGAGGATTGTTGAAATCTTCTGAGACTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCGTACATGGATA ACACAATGCCCTCTACTATTGCTTGATACTAGAATGCCATATGGAATTCTGTCAGTTGGTTGTGAAGAGCGTCTAGACCCAGCTGGGACAGGCTCACTTT ATAATGAAGGAGAAGCCGATATAGTTCTGCAGCATGTATTTTCCTTAATATACTCTGGTGTTAACCCAACTGCCATTGTAGTACAATCCCCTTATGTTGC TCAAGTACAACTTTTGAGGGATATGCTTGATGAAATCCCAGAGGCTGCAGGTACTGTGGTTGCAACTATTGATAGCTTTCAAGGTCAGGAAGCTGATGCA GTAATTTTATCCATGGTACGATCGAACACATTAGGAGCTGTTGGGTTCCTTGGGGATAGCAGAAGAATCAATGTTGCCATCACAAGAGCACGCAAGCATG TAGCTGTGGTCTGTGACAGCTCAACCATATGCCAAAACACCTTCCTCGCAAGACTCGTGCGTCATATACGACACTTTGGTAGGGTGAAGCATGTCGAACC AGGTAGTTTTGGAGGGTCTGGACTTGAGATGGGTCCACTATTACCTTCAATTGATTAGTGTAGCAACAGCAGTATGAATCAAATTTTAAACATGGGGTAG CAATTGCTTATATGATTGTCTTCCTTTCTTGTTTCTATTTTCTTATTGATTCACAAATAGGCTGGCCTTTCAAGTCATCAAAACTTTACAATACAAAGCA ATTCATGAAATTCAACATTTGTATATGAAATACTACTCATGCATGGAAATTATGAAAGAAAAGTTTATTCAATCACCCAAACAAAAGTTGTATTTAGTAG CATCATTTAAATTGCAAATCTCAACAAGGCT
• Tissue: flowers
• Gene name: LI_gene_64078;
• Additional information: details;

Expression of Ll_transcript_9792

FPKM

• FPAB: 0.7
• FPNAB: 2
• LF1: 0.9
• LF2: 0.1
• LF3: 0.7
• LF4: 1.2
• UF1: 0.5
• UF2: 1
• UF3: 1.5
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_9792

• Blastp: DNA-binding protein SMUBP-2 from Rattus with 42.43% of identity
• Blastx: DNA-binding protein SMUBP-2 from Rattus with 43.35% of identity
• Eggnog: Helicase(COG1112)
• Kegg: Link to kegg annotations (29532)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449927.1)
• Pfam: AAA domain (PF13086.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;