Id Trinity | FTRINITY_DN56899_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_9225 |
Sequence | ATTTCACCTTCTAAGCTCAACCCAATCTCAAAATTTTATTTTGGTTCCATCAGAAATTGTAGTGATGCACATGTTTTTATTGTATTTTGTCATAATTTCA ACTTCTTAATCTGGATGACATCAAATTTCTGTTACTCTTTTGAACTTACATCTGAATATATATGATCAGTTTTCTGTGTGGCTAAGTTAGTATTTTGTAA CTCACAGTTTCACTGAACTTTAGATTCTATTTTTTAAACGTTTTTACTAGCACAAGTTTGAAGGATGTTAAGGGCAAGTTTTTTATAACAAGTAGAGATT CAATTCACAACTTATTTAAATATGGGAATTATTTCATTTTTTTTTAAATTATAAGAACTACATTAAAAGATTTAAAACTTTGGGTACCTATAATCGAGTG AAAATGCAGAGACCAAAATATTACTATAACCTTTTCTTCTGCTTGAAATGATTGCTTTAGAAGTTTGAAGTGGAAGATCACAAATTTTGGGTCATAGTTT GTTTGTATGATTGTTATAGTTAGTTTCACAATGTTTGTTGTTTTGTTTGAAATCTGGAATTTTGAAGTTTCTAACTGTTCTGTTTTATGTTGGTATTAGA AGACTTCAAGAACATTAGTTATGCAACTCGTGCAAGACATTTGTTAGAGGATAATGAGTCCCAGGCTCAGAAAATGTAATCATAATGGATATTCTTCTGT TTAGTAAGGAAATAGTTTATTGGTATTCCTATGATCCGTTTCTGTATCTAACTTCAAATATTTTGTTTTCATTTTTATCAATTATTTATTATGTTTTGCA GTGTTGATTTTGCTCGAGGGTACATGACCAATGATGACCTTGAAACAGCCGTCAAGGAATTTGGACAAAGGTGCAGCAACATATCTAGGATATACAGGTT GTTCCTCATACATGTGCTTGTTTCTTGATTATCTATCTCAATATTCTACCTTACCGAAGGATATTATAACCCAAGATACATATTAATATCATATTTAATG AATAAATGAACTTCTTGGAAAGGTTGTACTTATTGCAATTGCTAAACTGACTTTGAGATTTTTCTCTCTTTGAGGGATTCATGGAATGTGCAATTAGTAT TGGGAAGAGTGTGAATGGAGTACCACTGTGGGTGATAGAGATTTCTGACAAGCCGGGAGAAGAAGAGGCTGAACCTGCATTTAAGTATATTGGAAACGTG CATGGAGATGAACCTGTGGGACGTGAGCTTCTTATATTTCTGGCCAATTGGCTATGTGATAACCATTTGAAAGATCCTCTGGCAACATTGATTGTGGAGA ATGTTCACCTTCATATCCTTCCATCAATGAATCCTGATGGGTTTAGTTTAAGAAGGCGCCGTAATGCAAATAATATTGATCTGAACCGGAATTTTCCGGA CCAGTTCTTCCCTGTAAATGATGATGAGGATTCTCGGCAACCTGAAACAAGAGCAATAATGAATTGGTTGAGAGATATACGATTTACAGCATCTGCCACT TTGCATGGGGTATTACTTATTTCGAATTCACGTAATAGTTCCTTTAATCTGTAATTCTTTTATGTCTACTCTGCGCTGAGCTGTCTGTTTCCTGTTTTTT GTGATCTGTTACAGAATGTCTTCCACGAGTGTTTGCATAACTTATGTTCATTTCTTCACTGGCATCCTACCTTTTGTTTCCCCCTTCTTTTTATTAAGTG TTCGAAAAGGCCAACCAATGTGAACTAAGCCTGAATAGTTTATCTTGTTGAATTGGTGTGACGTTTGCTACGGTTTTTTTGAATTCATCTATGATTATAT GATTTATATGCAGAAGTTTGTTCATTAATGGTCTCTTTTCTGTTTTGCCACAGGGTGCACTTGTTGCAAATTATCCTTGGGATGGTACTGAAGATAAAAA GTAAGAAGTTATTTTAATTTTATTTTCTCTCTACTTTGCAGCCCATTCTGTGTGTTTTGCTATGCTATTTAACTTGCATGCTATTTTTTTTATACTTACT ATCATGAGTGCATTATGTTTATGTGGAGATGTATAATGATATTCTTCCAATCTGGACTGCTGCATTGAATTTTCCTTTTGATATTAATAAATTACAGGAC AAATTACTACGGATCTCCTGATGATGATACGTTTCGATTCATGGCAAGTATATATAGTCATTCTCACTATAACATGTCTTCAAGCAAGGAGTTTCCCGGT GGAATTACTAATGGAGCAGCTTGGTATGGTTACGTTGTCTGAAACTACTACCTAGAGAAGTTTGTTACTGGAGTCTGTGTTCTTTCAATATGTTCATAAA TTATTTCAAAAGGTACTCACTGCAGGTATCCTATATATGGGGGAATGCAAGATTGGAACTATATACATGCTGGCTGTTTCGAGCTGACCTTGGAAGTTAG TGACGATAAATGGCCTAATGCTGCTGAGGTTAGTTCTGATCGAGCCTGAGCACTATTTAAAATTACAAGTATATAGGCAAAATAATCGGTACAACTTACT AGAGAACATTTTTTGAATCCCTGTCTGGGTATCCCTATGCTCTTTAGGTATGAGATAATGCCGTTCGTGTTATTAAGGTTTCCTATTCCCAGCAATGTGT TCCCACACTCAAACCTCTGACATTAAACACTGTTCAACTCCTTAACTCAAGCCTTCTTATCACCTGAGATGCAACCTTTTGGCATTGATACAAGAGAACA CAAAAAGGCATCACTTTGAGCTTATAAATCAGAATGACGTGTGTTAGGAAAATGTTTAAAAATGTTTTTGCCAATTGCATCTGTCATATAGACCAAAGGG GCAAAGAATAACAAATCCATTAAGCCATGGTCAAGTAAATGATAGTTGGAGAAGGAGGAGTTTTGGTGATAAAATCTTAGAAGACGGGATAATAGATCCC AGCCTGAATCCACAAAGAAACATGAGGTGCATCCTGAGATTATTCAAGCATTCTATTTAAAGAGCTCCCATTATAAAATAAATAGGACTAGATAATGTTT TTGTGTGTGACATTTTCACATAGATCCATCTTAAGCAAGGCGGATTTGCATTGACCGATAATGTTTCCAATCAACTTGTACTATTTTTACGAAGATAGTA GATCCTGTCCATTCTATCACTAAGGGAATTCTCCTGTTTCAATGATCATGGATTTTCTCTATTTCCAGTTAGATAGCAATTATAATTTGGACTAAAGTTG CTCATATTCTAACCAGAAATCATCCTGCTTAACACCATCATAGCTGAGTTCATTTAATTTTGTTTCTTTTTATTGCATTGCCTTATGTTTGATGATCTTG ACCAACAGAGGCATGAAATTTGATATTTGGTTTGCATGAATGGCATCTACATATTGTTGGTTATGCTTTGCTTTTCACTGTGATTCTTAGGACACTACTT GTTCTGTATGTTAATGTGCAGCTTCCTGTCATTTGGAGATATAACAAAATGAGCTTGCTTAACCTTGTTGCAAGCCTTGTGAAGGTATGATGTTTATGTT TATATGCTTCAACCTAAATAGATATTATGAAATCTTCAAAAGATTCTCGATTGTTTCGTGGAAACTATGAAAAAGAGAAAGGATGTAGGAGAGAACACCT TTGAGTGAGTGTATGCAAGTGTCCTGGACCTTGTCAAATTTATTAATTTAAGAGGAGGTTCTATACAGCCTATTGTACAAGTATGTAGTACAAAACCAAT CTAGTGCACTTGTGTACGATACGGAATAATACACACAAATAACTATAACGCTGCTACTTCAACCGTTCCCAAGGAATATAATATTTTCTTTGACCATTAA GATTAATAAGTATTCATAAGGTTATCTTTTTTTGCACACGGAGGATGCAGATAGAGATTGAGACAAATTTAGAATCCAAAATTATTCTCAATGGAACCAA ACATCTCTCATTACTGTTAGAATTATAGCTTACAGTTGAGAATCCGTATGAAACACACAAGAATGGCACACCAAAGAAAGTACTTTCATAATGTTTCTGA CATCATTCTAACAGAAAACGAGATGCAAAACATATTTAGGCTATGGATGCACCTTGAAAAGGGAGGAACATAAGCTTCTTTGAATTTCTAGGCATGTCGC AACCAAGTAACTACTAATCTAGTATTTTATGTTCCCTCACTATTAAGATCCAATTTTTTTATGTAACCATCTACTCAGAATATGTTTAAAGGGCACCGAA AATGAGGAAAACGGTAGCTTAGAGGGGACATGGGTAAACTGAATTGTTTTATACTAATTGCTACTGTGTGCACAAAACCCTTTGCAGAAATTACTGTTTC CATCTGGCTTCCTACACATTTCATTACTCCCTTCAATTTTTACAGAAGTTTGAAAGACTAAGTTGTCAAGAAGTTGCAGAGTGCTTGAAATAAAATCTGA AATCATATTTAATGACCATATAATTTTTTATTGGGTTTCACTGTTTTCATACATTCCATTATAGTTTATTGGATATAAAAAATGATAACATGTGTGTAAG GGATCAATTGGAACATTATCATATTTGCCTATTTTTAAGGTGTTGGCCCCATTGCATCTTATTAAACTAACTTGGTTGCGTTATAATATATAGACAGGAG TGCATGGTAGAATATATTCTTCGGGTGATGGAAGGCCATTGCCGGGCTTTATAACTGTCAGTGGAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_64105; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9225
Blastp | Carboxypeptidase SOL1 from Arabidopsis with 81.25% of identity |
---|---|
Blastx | Carboxypeptidase SOL1 from Arabidopsis with 83.33% of identity |
Eggnog | carboxy-peptidase(ENOG410XX0H) |
Kegg | Link to kegg annotations (AT1G71696) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442044.1) |
Pfam | Zinc carboxypeptidase (PF00246.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |