Id Trinity | FTRINITY_DN56899_c0_g1_i19 |
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Name Transcript | Ll_transcript_9245 |
Sequence | ATCCGATGAGAAAATTAAAAACAGGAAGTCAAAAATGAAAGATTTCTGGGCCTTAGAAAATTAATGAGAATGACCCAACCCCATGAAACTCAGAGTCCAC TCCACCTTGCTTGAATCTGAAATCATGTGGGGTAACATATACCAACACGAGAAAGCTTAACAAATCCAACATCATCGTTCATTAACATGACCAACAACCT TTTCTTCTCTCTTTTCCTTCTCCTTGCTTCCACACTTTCATCTCCTTCTCTTGCCAGGGTTCCCTTCCACACAAATGCTCCTTCAGACTTCAAGAACATT AGTTATGCAACTCGTGCAAGACATTTGTTAGAGGATAATGAGTCCCAGGCTCAGAAAATTGTTGATTTTGCTCGAGGGTACATGACCAATGATGACCTTG AAACAGCCGTCAAGGAATTTGGACAAAGGTGCAGCAACATATCTAGGATATACAGGTTGTTCCTCATACATGTGCTTGTTTCTTGATTATCTATCTCAAT ATTCTACCTTACCGAAGGATATTATAACCCAAGATACATATTAATATCATATTTAATGAATAAATGAACTTCTTGGAAAGGTTGTACTTATTGCAATTGC TAAACTGACTTTGAGATTTTTCTCTCTTTGAGGGATTCATGGAATGTGCAATTAGTATTGGGAAGAGTGTGAATGGAGTACCACTGTGGGTGATAGAGAT TTCTGACAAGCCGGGAGAAGAAGAGGCTGAACCTGCATTTAAGTATATTGGAAACGTGCATGGAGATGAACCTGTGGGACGTGAGCTTCTTATATTTCTG GCCAATTGGCTATGTGATAACCATTTGAAAGATCCTCTGGCAACATTGATTGTGGAGAATGTTCACCTTCATATCCTTCCATCAATGAATCCTGATGGGT TTAGTTTAAGAAGGCGCCGTAATGCAAATAATATTGATCTGAACCGGAATTTTCCGGACCAGTTCTTCCCTGTAAATGATGATGAGGATTCTCGGCAACC TGAAACAAGAGCAATAATGAATTGGTTGAGAGATATACGATTTACAGCATCTGCCACTTTGCATGGGGTATTACTTATTTCGAATTCACGTAATAGTTCC TTTAATCTGTAATTCTTTTATGTCTACTCTGCGCTGAGCTGTCTGTTTCCTGTTTTTTGTGATCTGTTACAGAATGTCTTCCACGAGTGTTTGCATAACT TATGTTCATTTCTTCACTGGCATCCTACCTTTTGTTTCCCCCTTCTTTTTATTAAGTGTTCGAAAAGGCCAACCAATGTGAACTAAGCCTGAATAGTTTA TCTTGTTGAATTGGTGTGACGTTTGCTACGGTTTTTTTGAATTCATCTATGATTATATGATTTATATGCAGAAGTTTGTTCATTAATGGTCTCTTTTCTG TTTTGCCACAGGGTGCACTTGTTGCAAATTATCCTTGGGATGGTACTGAAGATAAAAAGTAAGAAGTTATTTTAATTTTATTTTCTCTCTACTTTGCAGC CCATTCTGTGTGTTTTGCTATGCTATTTAACTTGCATGCTATTTTTTTTATACTTACTATCATGAGTGCATTATGTTTATGTGGAGATGTATAATGATAT TCTTCCAATCTGGACTGCTGCATTGAATTTTCCTTTTGATATTAATAAATTACAGGACAAATTACTACGGATCTCCTGATGATGATACGTTTCGATTCAT GGCAAGTATATATAGTCATTCTCACTATAACATGTCTTCAAGCAAGGAGTTTCCCGGTGGAATTACTAATGGAGCAGCTTGGTATGGTTACGTTGTCTGA AACTACTACCTAGAGAAGTTTGTTACTGGAGTCTGTGTTCTTTCAATATGTTCATAAATTATTTCAAAAGGTACTCACTGCAGGTATCCTATATATGGGG GAATGCAAGATTGGAACTATATACATGCTGGCTGTTTCGAGCTGACCTTGGAAGTTAGTGACGATAAATGGCCTAATGCTGCTGAGGTTAGTTCTGATCG AGCCTGAGCACTATTTAAAATTACAAGTATATAGGCAAAATAATCGGTACAACTTACTAGAGAACATTTTTTGAATCCCTGTCTGGGTATCCCTATGCTC TTTAGGTATGAGATAATGCCGTTCGTGTTATTAAGGTTTCCTATTCCCAGCAATGTGTTCCCACACTCAAACCTCTGACATTAAACACTGTTCAACTCCT TAACTCAAGCCTTCTTATCACCTGAGATGCAACCTTTTGGCATTGATACAAGAGAACACAAAAAGGCATCACTTTGAGCTTATAAATCAGAATGACGTGT GTTAGGAAAATGTTTAAAAATGTTTTTGCCAATTGCATCTGTCATATAGACCAAAGGGGCAAAGAATAACAAATCCATTAAGCCATGGTCAAGTAAATGA TAGTTGGAGAAGGAGGAGTTTTGGTGATAAAATCTTAGAAGACGGGATAATAGATCCCAGCCTGAATCCACAAAGAAACATGAGGTGCATCCTGAGATTA TTCAAGCATTCTATTTAAAGAGCTCCCATTATAAAATAAATAGGACTAGATAATGTTTTTGTGTGTGACATTTTCACATAGATCCATCTTAAGCAAGGCG GATTTGCATTGACCGATAATGTTTCCAATCAACTTGTACTATTTTTACGAAGATAGTAGATCCTGTCCATTCTATCACTAAGGGAATTCTCCTGTTTCAA TGATCATGGATTTTCTCTATTTCCAGTTAGATAGCAATTATAATTTGGACTAAAGTTGCTCATATTCTAACCAGAAATCATCCTGCTTAACACCATCATA GCTGAGTTCATTTAATTTTGTTTCTTTTTATTGCATTGCCTTATGTTTGATGATCTTGACCAACAGAGGCATGAAATTTGATATTTGGTTTGCATGAATG GCATCTACATATTGTTGGTTATGCTTTGCTTTTCACTGTGATTCTTAGGACACTACTTGTTCTGTATGTTAATGTGCAGCTTCCTGTCATTTGGAGATAT AACAAAATGAGCTTGCTTAACCTTGTTGCAAGCCTTGTGAAGGTATGATGTTTATGTTTATATGCTTCAACCTAAATAGATATTATGAAATCTTCAAAAG ATTCTCGATTGTTTCGTGGAAACTATGAAAAAGAGAAAGGATGTAGGAGAGAACACCTTTGAGTGAGTGTATGCAAGTGTCCTGGACCTTGTCAAATTTA TTAATTTAAGAGGAGGTTCTATACAGCCTATTGTACAAGTATGTAGTACAAAACCAATCTAGTGCACTTGTGTACGATACGGAATAATACACACAAATAA CTATAACGCTGCTACTTCAACCGTTCCCAAGGAATATAATATTTTCTTTGACCATTAAGATTAATAAGTATTCATAAGGTTATCTTTTTTTGCACACGGA GGATGCAGATAGAGATTGAGACAAATTTAGAATCCAAAATTATTCTCAATGGAACCAAACATCTCTCATTACTGTTAGAATTATAGCTTACAGTTGAGAA TCCGTATGAAACACACAAGAATGGCACACCAAAGAAAGTACTTTCATAATGTTTCTGACATCATTCTAACAGAAAACGAGATGCAAAACATATTTAGGCT ATGGATGCACCTTGAAAAGGGAGGAACATAAGCTTCTTTGAATTTCTAGGCATGTCGCAACCAAGTAACTACTAATCTAGTATTTTATGTTCCCTCACTA TTAAGATCCAATTTTTTTATGTAACCATCTACTCAGAATATGTTTAAAGGGCACCGAAAATGAGGAAAACGGTAGCTTAGAGGGGACATGGGTAAACTGA ATTGTTTTATACTAATTGCTACTGTGTGCACAAAACCCTTTGCAGAAATTACTGTTTCCATCTGGCTTCCTACACATTTCATTACTCCCTTCAATTTTTA CAGAAGTTTGAAAGACTAAGTTGTCAAGAAGTTGCAGAGTGCTTGAAATAAAATCTGAAATCATATTTAATGACCATATAATTTTTTATTGGGTTTCACT GTTTTCATACATTCCATTATAGTTTATTGGATATAAAAAATGATAACATGTGTGTAAGGGATCAATTGGAACATTATCATATTTGCCTATTTTTAAGGTG TTGGCCCCATTGCATCTTATTAAACTAACTTGGTTGCGTTATAATATATAGACAGGAGTGCATGGTAGAATATATTCTTCGGGTGATGGAAGGCCATTGC CGGGCTTTATAACTGTCAGTGGAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_64105; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_9245
Blastp | Carboxypeptidase SOL1 from Arabidopsis with 81.25% of identity |
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Blastx | Carboxypeptidase SOL1 from Arabidopsis with 83.33% of identity |
Eggnog | carboxy-peptidase(ENOG410XX0H) |
Kegg | Link to kegg annotations (AT1G71696) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442044.1) |
Pfam | Zinc carboxypeptidase (PF00246.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |