| Id Trinity | FTRINITY_DN56906_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_204069 |
| Sequence | TAACCTTTTCCATATTTCGCTCTCCCACTATTCTTAGCTTTATTCACCTCTTCCGCCGCTCTCTTCTTTTCTGGTATCTATTACTGCAGATATTAAGTTG ATTACTTGGCTCAAAGAATTGTCTTAGCACTCATGGCAACTAGACTTCAGTTTGAGAACTCTTGTGAAGTTGGAGTGTTTTCTAAACTCACCAATGCTTA TTGTTTGGTTGCTATTGGAGGTTCCGAAAACTTCTACAGTACATTTGAGGCTGAGTTAGCAGATGTTATCCCTATTGTCAAAACCTCTATTGGTGGCACT CGAATTATTGGTCGTCTTTGTGTTGGAAATAAGAATGGTCTTCTCTTGCCCCATACCACCACAGACCAAGAACTTCAACATTTGAGGAACAGTCTACCTG ATCAAGTTGTTGTTCAGCGCATAGACGAAAGACTTTCTGCTCTGGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACGCACACCGATCTTGACAG GGTATTGTCTTAATGTAGATTATAACTCTTTTCTCTATGCTAATCTCTCATGCTTGTTTAGGACTGGACACTGGTGTGGAGAGAAAGTCATATCGTCTTG TTAAACACGAGTGCTGAATAAATAAATGGACAAATTGGAACATCTGTTGCTTGTCTTTGTGAAGTTGGTCACCTAAATCTCTTTTCCAACTTTTTACAGT AATTGTGTGAACTGTATATAGTTTCATGAAAAGAATACAAATTTTTCATTGCAAAGTTTGGTGTCATGTATGGTAACTCGTAAGACTAGGTAATTTGAGT ATTTGACCACCCTGTAATCTGTGACCTGTTGAAATCATTTTTATTTGTGAAAATTCGGGTTCAGGGTTGTGTATTTATATATATGTTCTATGTGCTTCAG CTTTTATCAGGCAGAAAAAGAACCTTTATGGAATAGCTACCAAACTTTTCATCAGTTTTGGTGGGGTAGAAATAAAGTTGACCAGAAAAACATGCAAATT ATGTAGCTAGGTGACTAATGCTGGTTTGGAATTATAAATAAAGTAATTTAAGATGTTTCAGATTTAATAAGGGCCTCATTACTCTTGTTTGTCCACTCAG TTTTTTCTTGTATGACACACCAGCTCAATCAGTGGAACTTATGTCTTGGACTAGAGTCATTACTGACCTACTTTATTCCATCCAAATTTTTTGGAAGGGA TTAAATTGCATATTATTTATCTTCCGGATTTTTTAAATGGTTCTTAACTTTATTATTCACTGTGAATTTTTTGTTCAGGAAACTGAAGAAATGATCGCAG ATGTTCTCGGGGTAGAAGTCTTCAGGCAAACTGTTGCGGGTAATATTCTCGTCGGCAGTTACTGTGCATTCTCCAACAGAGGTGGTTTGGTTCACCCTCA TACTTCCATAGAAGACTTGGATGAACTTTCTACACTTCTTCAAGTTCCTTTGGTGGCAGGGACCGTCAATCGTGGAAGCGAAGTTATAGCTGCCGGAATG ACAGTGAATGATTGGACAGCCTTTTGTGGTTCAGACACCACAGCAACTGAACTCTCTGTGATTGAGAGTGTTTTCAAGCTGAGGGAAGCTCAACCTAGTG CCATTGTGGATGAGATGAGAAAATCACTCATTGATAGCTATGTCTAAGTTTTGGTGATAGTAAACACTCTTCATACTATGTTGTACTATTTATTTCTAAA ATGTTCAAGTTTTGATAATAGTTATTTCTTCTTCTTTTAGTATAACAGTTTTGATGATAGTGTCCTTTAAAATGAGAACACAATTTTCAGGTAGAGGTGT AGTTTTCATTAGTTGTGTGTGATACCTTTCTATTTTAATTAGTATTTTCACTATTTTGTCATCTATATTTAACACCCCTTTCATTTAGTGAATAAAAATG TGACGAGAGATTCTTCTGGGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_64181; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204069
| Blastp | Eukaryotic translation initiation factor 6-2 from Arabidopsis with 89.43% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 6-2 from Arabidopsis with 93.5% of identity |
| Eggnog | Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm(COG1976) |
| Kegg | Link to kegg annotations (AT3G55620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426674.1) |
| Pfam | eIF-6 family (PF01912.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |