| Id Trinity | FTRINITY_DN56911_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_203631 |
| Sequence | CTTGATTCATGGTTTGGTATTCTGGTTCATAGGCATAGAGGAACCACACCAATCCATCCCAAACTTGGTGCTCTACTGCAGTGACAATATTGTACGGGAT GCCTTGCAGAAATGTAGCTCATAGAAGGCAATTTTTTTTACATTGCAGGACCTTTGCAGGATGCAATTCAGAATCAAGGAAAATTTTAGTTCAAAGGCTG TATAACTTATGATTATTCCCTAGAAATTTTAGGGCTTCAATCAACCTCTGTAGATCAACCAGGAACTTATTTACGTTATCATGGCAATGGATATTCAGTC CATGGTTATGAGAGGAATCTATTGAGTGGTATTCTAAATAGGATGGTTTAGTATATAAGGATATTAAAAAACCATAAAGGACTAAAAGAAAAGCATGTCA CGTGTAGCCATGGTAGCTAAGTACGCTGTCCAGGGAAGGACGGATAAGGCACAAATCTGACATGGGGATACGACAAAAGAAATATAGAATGTTAAAGAAT ATGGTTAGGAGTTCAACCAAATCTGATGATTTATTTAATGTCAGGCTTAACTTGTGCTTAAGTTTATTTCACAAATGATTACATCATGATTTATGACAGA TTTTATCTTTATTTTTGTGAGGAACATTTTAGATATCAAGTTTCTTGTCCTCATGGGAATACCGGTAAGTAGATAAATTTGTTTAAGGATGCCTATGATA CAGTGACTAATTCTCAAACCAATCCTTCTTTTTTTCCCGCAGTGCCACAATGGACATACCCTTTGTTCAACTTGTAAGACAAGGGTAAACAACCGGTGCC CAACTTGTAGACAGGAACTCGGTGATATAAGGTGTCTGGCATTGGAAAAGATAGCAGAATCACTCGAACTACCTTGCAGATACAACTCTCTTGGGTGTCC AGAGATATTTCCCTATTACAGCAAACTCAAACATGAGTCTATTTGCAACTTCAGACCTTACAACTGCCCCTACACTGGGTCAGACTGCTCTGTCGTTGGG GATATTCCATACCTTGTTACACATTTAAGGGATGACCACAGGGTTGATATGCATTCTGGATGCACTTTTAACCATCGCTATGTCAAGTCTAATCCCATGG AAGTAGAAAATGCTACATGGATGCTAACTGTCTTCCACTGTTTTGGTCAGTATTTTTGTCTTCATTTTGAAGCCTTCCAGATTGGTACAGCTCCGGTTTA CATGGCATTCCTCCGTTTCATGGGTGACGAAAGAGATGCGCGAACCTATGGTTACAGCTTGGAGGTAGGAGGAAATGGGCGTAAACTAACTTACGAGGGC AGTCCAAGAAGCATCAGAGATAGCCATAAGAAAGTTAGAGACAGTCATGATGGCCTCATTGTATATCGTAACATGGCGCTTTTCTTCTCCGGGGTTGACA GGAAAGAGTTGAAGCTAAGAGTAACAGGAAGGATATGGAAAGAACAACAAAACCCTGAAGGCGGTGTGTGCATACCAAACCTGTGTAGCTAAATTGCTTG TTGATAATTTTGGAAAGTATTTATGGCTGGTGAATGGTAATGGAGTTTTCAACTTACAAAATAAGAAGTTGATCTCCCTTTTCTGCAGTTGTAACCAAGA TACTTGTCAAGTCTTTGGCCCTACTAGTGTATGTGAAATTCTTGGAACAGTTTTCTCTCTTAAAAGTGCTTAAATTTGGCATATTGATAAATGGATTTTT TTTTGGTTTTTTTTATCACATACTTTCCATATTCATAGAATACTTGTATTGTCATTCTTTCCAACCATTTTGAAATACTGTGCTATTTGCTACCTGAGTT TGACTTCAATAATATCATTTTCAATAATGTTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64236; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_203631
| Blastp | E3 ubiquitin-protein ligase SINAT5 from Arabidopsis with 84.35% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase SINAT4 from Arabidopsis with 83.53% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT5G53360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456873.1) |
| Pfam | Seven in absentia protein family (PF03145.15) |
| Rfam | 5S_rRNA (RF00001) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |