Ll_transcript_204969

• Id Trinity: FTRINITY_DN56952_c2_g1_i1
• Name Transcript: Ll_transcript_204969
• Sequence: AAAAGCTTACAAGAAAGCTGCAATTAAGAACCACCCCGATAAGGGTGGTGATCCTGAAAAGTTCAAAGAGCTGGCTCAAGCTTATGAGGTTCTGAGTGAC CCTGAGAAACGTGAGATATATGATCAATATGGTGAAGATGCTCTCAAGGAAGGAATGGGTGGAGGTGGCGGTGGACATGACCCCTTTGACATCTTCAGTT CATTCTTTGGTGGGGGTGGGAATCCATTTGGTGGTGGTAGCAGCCGAGGAGGGCGGAGGCAGAGACGTGGAGAAGATGTTGTTCACCCTCTCAAGGTCTC CTTGGAGGACCTTTACAGTGGTACATCTAAGAAGCTCTCCCTCTCTAGAAACGTCTTATGCTCAAAGTGCAGCGGGAAAGGGTCTCAGTCCGGTGCTTCC ACGACGTGTGCTGGTTGTCAAGGAACTG
• Tissue: flowers
• Gene name: LI_gene_64588;
• Additional information: details;

Expression of Ll_transcript_204969

FPKM

• FPAB: 111.6
• FPNAB: 95.7
• LF1: 63.5
• LF2: 98.1
• LF3: 67.2
• LF4: 62.5
• UF1: 50.8
• UF2: 78.3
• UF3: 73.6
• UF4: 50.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_204969

• Blastp: Chaperone protein dnaJ 2 from Arabidopsis with 86.47% of identity
• Blastx: DnaJ protein homolog 1 from Allium with 83.1% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT5G22060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004487721.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;