| Id Trinity | FTRINITY_DN56968_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_204244 |
| Sequence | CGTAAATCAGGTGCTTTTCTTGAGATGATAATGTAGTGTTACTCCTTCCCACGCACGCTTTGCGAACCTTTCCCTCATATATAAACCTCTTTCATTCAGA GGCAGAAAAAAAGGAAAGGCTTCTGTGTTCAATGGGAGAAAAAGGTGAATGCTCTGGAGTCAAACCCTCTGATGATGAAATCTGGGCAAAACTTGTTCCG TCAGACTCGAGATATTCAGACGTCGAGATAAGGTCAGACGAAAAAGTAATATGTTCAGAGATATCAGCTGCATTTGGTGACAAACATAGCTGGTGCAAAA TAATAAGGAATTCTGATCTATGTTCTGCTACAGTAGAAAACAAGAGTCCGAATACAATACTTGTTGATGGGACTGAGGTGCACAATGAGAACACTGTTGT CATCAAGGATGGAAGTGAAATTATTCCAGGTCCTGATAAAGGGGGATTTGTCAGCTACAGATTTGATATCTTGTCAAGCCCAGAAACCAGCCAGAGGCAG CTGCAGATCTGTGTTGATGTTGAGAATGCTAAGTGTAGCATTTGCTTAAACATATGGCATGATGTTGTGACTGTTGCTCCATGCCTTCATAATTTTTGCA ATGGTTGCTTCTCAGAGTGGTTAAGGAGATCACAAGAAAAACGTTCAAGTGTACTTTGTCCTCAATGCAGAGGAGTTGTTCAATTTGTTGGAAAAAACCA CTTTCTGCGTACCATTGCAGAGGATATGCTAAAAGCTGATTCTTCCTTAAGACGCTCAGATGAAGAAGTTGCACTCTTAGATACTTATTCATCCGTACGA TCAAACCTTGTCATTGGATCTGGAAAGAAGAATTGTCGAAAGAGAGCTCACACCCCAGTGGATGATCAAAGTGATGGCACATACCTTCAGTGTCCACAAT GTGTTCATGAAGTTGGTGGGTTTCATTGCAATAATAACACTGTTCATCTCCAATGTCAAGCATGTGGAGGAATGATGCCATCCCGGCTTGGTTTTAACAT TCCTCAATATTGTTCAGGATGTGATAGATCATTTTGTGGAGCTTACTGGCATGCTTTAGGGGTAACGGGCAGTGGTCCTTACCCTATTTGCTCCCAGGAT ACTTTAAAACCTATCTCAGAACACTCTATCTCAAGAATCCCTTTGTTAGCACATGAAAATAATGTGCATGAACAGAATATCACTGATAGTTGCATTAGAC AAATGGGGAAGACATTACAAGATGTTGTATCAGAGTGGATAGTAAAGCTGAACAACAAAGAAATTGATGTAACACGTTTGGCGTTGAATCACGTTGAGAC GATTAATGCTAGGACTTCTGTATGCTGTGATTGTTATCAGAAGTTGGTGTCATTTCTCCTATACTGGTTTCGGATTTCTATCCCGAAATACCGTCTTCCA CCAGAAGCATCAGCAAGAGAAGATTGCTGGTATGGATATGCATGTAGGACACAGCATCATAGTGAAGAACATGCTCGGAAAAGGAATCATGTATGCCGTC CAACAAGAGGCTCCAACATGTGATGATCGAGAAAATAATATATGCACCGACAGTTCCGGAGCTTTTACACTATCAACACATCATCCATTCATGTGTTAAA ATAAAAGTAATACACATGAATGAAGAAGTGAAAAACAAAGTGGTGTGTCTATTGGGTGTTGATTTTTCTTTATCTTTTGCATTTTAAGGAGCTTATAAAG AACTATGATGACAATCATTGACTTGCAATATAAGTTATCTTGAAATTTGGGGTTGCTAACATTATGGCTTAAGGTTTTTATACGGTTTAATGAAGTACAA ATTATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64719; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204244
| Blastp | E3 ubiquitin-protein ligase CHFR from Pongo with 26.23% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase CHFR from Pongo with 26.23% of identity |
| Eggnog | zinc ion binding(COG5243) |
| Kegg | Link to kegg annotations (100171543) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458160.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |