| Id Trinity | FTRINITY_DN56970_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_205358 |
| Sequence | AATACCTTTCAACTTTGAACACAAATACTTGTTTTGCTTTCTCAATCTAGTAATTGGTTCAAGTGATACATGCTTAATTTTTTATAACCAAGGTTTCAGA TTTAAGTCTTGTAAATAAAAAATGATTGTTGAAAGAATCAACCTCATATACATATGAATGTTACCGGCCCAGACATGATTGAAGAACCACAAAATAAATA TAGTAAGTACTAGGCAGTAGTTGAACTAATCCTAGTTTCATACCAGAATATTTTTGGAACAAGACATTCTTAAATCATGGAAACAAAACAAGGGGGTTGT CAAGTTAATGAATTTTTGTCTTCATGAGACTTGGATCTATATGAATAGTTGTGACCATTGGCCTTCCAAAACAAGGATATGGAAATGGTTCCAGAAAATA TGAAGAGACAACTTTCTTTGGCTGTGAGGAGCATACAGTGGATCTATGCAATATTCTGGTCTGGTTCAGATACCAACCCCAGGGTCTTGATCTGGAGAGA AGGATATTACAATGGAGACATTAAGACTAGGAAAACCAATCAAGGATTAGAACTTAATTCTGACCAAATTGGGTTGCAGAGGAGTGAGCAACTAAGAGAG CTTTTCAGATCACTCAAAACTACAGAAGCAACTAAAAAGCCTTCAGCAACACTTCCCCCTGAAGATCTCACTGATACTGAGTGGTATTATTTGGTTTGCA TGTCCTTTGTATTCAACATTGGTCAAGGGTTACCTGGAAGAACTCTAGCCAATGACCGGCCTATTTGGTTGTGCAATGCACATTCTACCGATTGTATACT TTTTAGTCGCTCTCTGCTCGCTAAGAGTGCATCTATTCAGACAGTTGTGTGCTTTCCATTTATGGAAGGGGTTATTGAGCTAGGTACAACTGATCTTGTA AGTTGTTCTTCTTGATTTAACTTCAATATTACTTTTCCGTTATTCCGCCCATTATGAAGTTACATGTTCAAATTTTGGAAACAGTCTATCCGCTTTCCAA GGGAAGGCTGCATATGCATATACCGACCCTTCCCAGACCATACTAAGTGGGAGTCTCGTGTATTGGGTTGCCGTTTATTACTTTTCTGTTATTCCCTCCA TCATAAACTGTGTTGCTTGTATTGTATTTATTTTTGTGAAGGTGCAAGAAGATCTTAGTCTTATTCAACAGATCAGAACTTCCTTCTTGACTATTCTGGA AGTCGATGTTCCTAAAAAGGCAGGAGCTACATTGAACACGGGAAACGAGGAAGATGTTGCATGCACGGCATTTGATCAAAATGGTTATAATGTTAAATCA ACTGCAGAAGTAGGAAATGAAGTAATCAACACAACCTCTCCGAATGTTTCGGATATGTTACAACCTAATCAACCAGCAGATGAAACATTGATGGTTGAAA CCTGGCAAGTTATGGATGAAGAATTAAGCAATTGTGTCCATAATTCGATGAATTCTAGTGACTGTATATCCCAAACTTTTGTTAGTCCTGAGATGATTGC TTCTGTTGCCAATGGCGAAAATACAAATGATCATTATGACCAAGACCTTCAAAAGTTCAATAACCCGAAAATGACCTTAGTGGATCCTCAAAGCGACCAT TGGCATTATCAGAGTGTTCTTTCTACCCTTCTAAAAAGCTCAGACCAGTTAACTATGGGAACACGTTTCCAAAATTTTCATCAGGAATCGAGCTTTGTCA GTTGGAAGAAAGGAGGGCCAATCGATTGCCGAAGGCCAAGAGCAGGAAAACCACAAAGTTTGTTGAAGAAAGTATTGTTTGAAGTTCCTCGGATGCACTT GGAGGGGTTGCTTGAGTCTCAAGAAGAGAATGACTACAAAGATGGAATGAGACCGGAGGTAGATGAAAACGGCACGAACCATGTTTTGTCCGAAAGAAGG AGAAGAGCAAAACTAAACGAAAGGTTTTTAACTCTTAGATCAATGGTCCCTTCAATTAGTAAGGATGACAAGGTTTCAATACTTGATGATGCAATAGAAT ACCTTAGAAAACTTGAGAAAAGGATAACAGAATTAGAAGCTCAAAGGGATATAATAGATATAGAGGCTAGAACTAAAAGATCACCTCAAGATATGGTGGA GAGGACTTCTGATAATTATTTCAATAAAAGTGCTACTAATGTCAAGAAGCCAATGAGTAAAAAGAGGAAGGTTTGCGATATTGACGCGGCGCGCGTCGAG ATTAATTCGGATGCTTTTAGAGGTAGCTCTACTAATGATGTCAGTGTTAGTGTGAGTGGCAATGAAGTTGTAATAGAAATGAAGAGCCTTTGTAGACAAG GAAGGGTGCTAGAAATTATAGAAGCAGTTAGCTCTCTCAATTTAGATCTTAATTCAGTTCAGTCAACAGAAGCTGATGGAAATCTTTATCTGAAAATTAA ATCTAAGTTCAAAGGACCAACTATTGCATCAGCAAAAAAGATGAAACAAACACTCCAAAGAGTGGCTCACAAGTGTTGATTCTTCTGTATTTCCACCAAA AACCAAGGGGATGTTCAGTTTAGTTCCTGACACTGCTATGTAACATAGAGAATTCATTTCAAATAATGGAGTCACAACTCACAAGTGGAAGTTGCTGCAG AATTTTGTGAAAGACTTCCAATGAAAGGGTATATAGTTTTTGTTTTGCTTTCTATAACTTCTTGCTTTTGTTACTTGTAAAATGGACTTCTGTCAAATCA TTTTTAATTTGTAAATGGGAAAATAAGCTTAGTTGAGTAGATTTTGTGTAATGCTACTAGCAACTATAGCCAAGATAACTAGACCAATGGCTATATTAAC AAGGATCCTACATTTGTCACCAATAAAAGAAGTAGGGATATAGCATTTCTTTCAAGCACCATATGATAACAAAAATGAACTCATTAAGATGGTTTTCCTA TATTATTTTACTGCTGCAACAATGATATGTACACCAAAACTTTTTACTCTCCTTTTGAAAACAGTCGAGGCAAAATTGTGTACATATACTTTCTCTAGGC AGCTTTTTTCGTGAATAAGTCATGCTTAGACTTTTTAAACAGCCTATTTAACTTAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64733; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_205358
| Blastp | Transcription factor GLABRA 3 from Arabidopsis with 42.82% of identity |
|---|---|
| Blastx | Transcription factor EGL1 from Arabidopsis with 36.8% of identity |
| Eggnog | Transcription factor(ENOG410Z2WK) |
| Kegg | Link to kegg annotations (AT5G41315) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422571.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |