| Id Trinity | FTRINITY_DN56972_c0_g4_i6 |
|---|---|
| Name Transcript | Ll_transcript_204628 |
| Sequence | GTGACGCTCTTAGCGCCACACTCTTATAAATTAGGGTTTTGATTTTCTCACTCCTCTTTTCCTTTTACTCAAACTAGCGTCACAACCTTTTTCTTCATAG TGTCTATGGCGAAAGCTTCTTCTGGAACCGTTAATCCACATGTTCGGAATGGAGTTCGAATTGTTGTTGCCGGAGATCAAGGAACTGGAAAATCTAGCCT CATCATCACTGCCGCTGCTGAAAATTTCCCTCTTAATGTTCCGCCGGTGTTGCCGCCCACTAAGTTGCCGGAGGATATATATCCCGATCATGTGCCAATC ACAATCATTGACACATCTTCCCGTGCTGAGGACAGTGATAAAGTTACTGAAGAATTGCAGCGGGCTGACGCAGTTGTCCTCACTTATGCGTGTGATCGCC CTGAGACACTTGAAAATCTGAGTACATTTTGGCTCCCACATCTCCGGAAATTAGAGGTAAAGGTCCCAGTTATAGTGGTTGGTTGTAAGCTTGATTTGAG AGATGAAAATCAGCAGGTGAGCCTAGAACTGGTGATGTCACCAATAATGCAACAGTTCCGAGAAATTGAAACTTGCATCGAGTGTTCAGCATCCAGGCAT ATCCAGGTCCCTGAAGTCTTCTACTATGCACAAAAGGCCGTTCTTCATCCAACAGCTCCATTATTTGATCAGGAGTCGCAGACTCTAAAGCCTCGATGTG TGCGGGCATTGAAGCGGATTTTTATCCTTTGTGACCATGACAGAGATGGTGCCCTTAGTGATGCTGAGCTGAATGATTTTCAGGTTAAATGTTTCAATGC ACCTTTGCAACCATCTGAAATTGTGGGTGTAAAGAAGGTTGTACAAGAAAAGTTGTCTGAAGGTGTCAATGAGCGTGGGCTTACATTGACAGGATTCCTT TTTCTTCATGCCCTTTTCATAGAAAAAGGGCGTCTTGAGACAACATGGACTGTGCTCAGGAAGTTCGGATATAATGACGAAATCAAGCTTGCTGATGATC TAATTCCACCTTTGAAACGGGCTCCCGGTCAGAGTGTGGAGTTGACAAATGAAGCACTTGATTTCTTGAAGGCAATCTTTGATGCTTTTGATGGTGATGG GGATGGGATGTTGCGACCTCGTGAACTCGAGGAATTGTTTTCTACCGCCCCAGAAAGTCCTTGGACTGGAGCTCCATATGAGGATGCTGCAGAAAAAAAT GCATTTGGAGGACTATCACTTGATGCGTTTTTGTCAGAGTGGGCACTTATGACACTTCTGAACCCAAGTTTTAGTGTGGAAAATCTGATATACATTGGTT ACACTGGTGATCCTTCATCTGCTATTCGTGTGACTAGACGGAGGCATTTAGATCGCAAGAAGCAACATTCAGAAAGAAATGTTTTGCAGTGCTTTGTTTT TGGGCCTAGGAATGCCGGAAAATCTGCCTTGTTGAATTCTTTTATTGGAAGACCATATTCTGAAAATTCCAATCCAACCACCGAGGATCGTTATGCTGTA AATGTTGTTGATATTTCTATGGTAAATGATACTCTATTATCATTTTATAATGGCTGCTGCTTAATAAGTAAAATCTTTCCTCTCCCTCTCCCACTATCAC ATTAGTTGTCTTTTTTTGTATTCATTTTATTTTTATTGGCATTTCGTTCTTCTCAACTGTGTTTTCTCATTTTGTTTGCAGGAAAACAAAAAAATTTCTT GTACTGAGAGAGATTCCCGAAGATGGAGTTAAAGCTCTGCTGTCCGATAAGGAATCTTTAGCCTCATGTGACATAGCTGTTTTTGTTCATGACAGGTCCG ATGAGTCCTCGTGGAGGGCGTCATCTGAGCTGCTGGTGGAAATCGCAGGTCATGGAGAAGATACTGGCTTTGAGGTGCCCTGCCTTATAGTTGCAGCTAA AGATGATCAGGATTCTTTTCCAATGGCTATACAAGAGTCAACTAGGGTATTTTTTATTGGCTTATTTCTTTGCATGATTGTATGCGTAGTCAAGTTTGCA TTTTGTTGTTCTTGTGATTTTGTTACATGCTTAACATTTTCAAATTCTTGGATGGTTAGAAAATAAATCTATTTGACGTGGTGATAAGACGTGTGTTGAT GAAATAATAGCAAGTAGTAGTGTATGTATGTATATATTTTGTCCTTGTAATGAAATTTGATTAAGCAACTTAGAAATCAAAAAAGAAGTCCAATTTGATT TTTGTTGTTTCATTTTTTATATAAGAGTTGTGTCGTGACACTTTTTATATATTTTTTTCTAGTTTTATTTTGATAATTTACTTGGACTATGAAGTTATGG ACGGAGATAATTGAACGGACGTTGAGACAATAGATAAGCTTCAGAAGCACATATCTTTTGTATTAGTCAAAATAAGATGAAGTATATGGAGTGTAAGTTT AGCAAGAGGGGAACTAGCCTGATGTATTTCATTTGGAATTTTCAGATTTTCATCTCCAAATCCTATATTAGAATTGACTCGAGAAGACAAATAAGGCATT GGGTTAATTTTCTATATTAGTGAAGGAGATAGTATTTGTAGCATAAGAAGGTTAAGCAATCTAGCTTGTATGGTCTAAAGTTGAGAAAAGAAAAAAAAAC TAATAAAGCTAACTTACCAACCAAATACTCATTCCAAAAGGAAGTTTAATCATGCCCATTTTGTAGATTATCTTTGTGTGGTTTCACCATTCTGTTGAGC TTCATACTGGACTGCTCTGCTGCATAATCATATAGTTTTCTTGTCATGTGCTGTGTGAATAATGGGCAGTCAAACATAGCCCTGAGAGTGTAATTGTAAC AATTACCAAATGTACATGATTCTGGGAAAAATGTTCAAGAAACTGTTTCATCCTTGATCAACAGCAATGACACTTTTGACTTGCCATTGTGTTTTCAGCT TAGTCAGGATATGGGAGTAGAGGCTCCTATCCCAATAAGTGTGAAGTTAGGGGATTTCAACAGTCTGTTCCGCCGTATTGTAACTGCTGCTGAGCACCCT CATTTAAGCATTCCAGAAACTGAAGCTGGGAGAAGCCGCAAGCAATACAACAGACTTATAAATCGTTCTCTTATGGTTGTTTCAGTGGGAGCTGCAGTGG CCGTAGTTGGTCTAGCTGCTTATCGGGTATATGCTTCAAGAAAGAATACATAAGTCAGGTTTTGTAAATGGTCCAAGCTCTATAAACTTGACCTGAAAAT GCATCTTGTCCTGGCTAGCTATTATGCTACACCAACATTAAGTTGGCTAGTTTATTCCAATTTTTGTAGAGATTCAAATTGTCCTTTGTTTACAATATCA GTCTTCAATTATTCCTTGTCAAGAATGAATCAAGTTAGCATAAATTTTATATTCTAATTATTCCTTGTTTACAGTAATAACTGTCCCAGTTAATTACTGG AAACTTTTTAAGAATGAAAGCATGGTCTCTATAAATTGTAGAGAAGATTCCAATTAAGAAGCCTTGCAATTGACATTATTGGAAAATGTTTTAAAATAAA T BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64755; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204628
| Blastp | Mitochondrial Rho GTPase 1 from Arabidopsis with 74.01% of identity |
|---|---|
| Blastx | Mitochondrial Rho GTPase 1 from Arabidopsis with 74.01% of identity |
| Eggnog | Mitochondrial GTPase involved in mitochondrial trafficking (By similarity)(ENOG410XRHW) |
| Kegg | Link to kegg annotations (AT5G27540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452250.1) |
| Pfam | Ras family (PF00071.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |