Id Trinity | FTRINITY_DN56973_c2_g1_i2 |
---|---|
Name Transcript | Ll_transcript_204914 |
Sequence | CCCGGCCCGAGTTAGAAATATCACAAGTATGTGAGGTTAACTCTTTTGACAATTGTTTTTTTCCATACACAAGATCTATTAGTAGATGGAAAAAAACATA AGTAAGTTAGGCTAACTTTTGTAAGAAACGTTTTTTTCCAAGATTCAACGTTTTTATTTAATGGGAATCAATCACGGATACATAAACGAGCATTGTACAT ATTACCTGAAAAATGAAATGAGGAATTCCTTGCCACAAACAACAAATCAAAACACGCCACACAACCACACTACCATAGGGTGAACCTCACCAGAACATAT CCGTATCTCTCTCTTCTTCGTCTTCTTCTTCTCTCTCTCTCATTCAAAGATCTGCAATCTCTCTCTGTCTCTCTCTCTAGCAATGACCGAACCGACCGAA CCATTCGCGCCATCTTCTCCAGTGGGTCCCACAGCACCATCAAAGGACCTAACCACAGTGGTTCACCCACGCCGCGAACTCTTCGAACACGGTCTACTAC CAATCCCTAAGCTCATTTTCTCTGACCCAACCCTAACCCTAATCCCTCTCAAACAGAAGCTTCTCGAACAATCCGCGAACAACCGAGTCGACTCAGCTGT AATCGCCGACTCACTCCAGATCTCAAATGATCACGCTACTCTCGTCCTTGATACTCTTGCTTCGGTTCTTCCTCCAGTAAAGGATAATTCTGGCGAAAAC GACGCCGTTGGTGTTGATGTTTTCGATCTGCTTCTGTTTCTATACGTTCAATCTTATAAGAAGCTTCTTCCGAGAACGCATAAGGATTCTGCTGCTGTTA GTGATGTATGGCCTTCAACTTCTGCCTTTGACGGTTACTTGTCCGCGCTCTCGCCACTTCAGGTCGATTCGATTCTCGGCTTTTCCTTTGAATCATTCAA ATTGAAATTATGTTATGACATTTTCTGTGTTTCTGACAAATGCATGATATAAAAAAGAGCTGCATAATGCACTAGGCTTCTAGTCTCGGGAGGTAGATGT ATGCAATCTTACTCTCACAACTGAAGAGACTGTAGAAGTAACCTTACGGAGTTACAGTTGCGCCGAAGCTCGTTATTGTTGCTATCAAATCCTTTGATCA GGATTTCATTTAGGTCTTGTCTATTTGCATATGACATCAAAAGTTGAAATGATTTTCAATTGAATTGATTTGGAAATTGAGGGACAGTTTGTTAGGCTTA ATTAACAAACAAAAAGTGGTTCTTTCCACATGTTTTTGGAATAAGCTTGCCCAACAAGTTTGGAATGACACTGCTATCAGAATACGCGATTATTTTTAAT AAAGAACCTTTTTAAAGCTTGTGCGCAGCAACAGTCGGCGGTTTATGCCATCGCAGGCTGATGAAGAGGCGCATCAGTTGTCATATCTGCAAAAGCATCT GGCAAACATTCTGTCTCTACTAGCAGAGCCTGTGGAGGGGGAGGGCGATGAATCTCTGGTTCGTTATCAATTTATTGCATGCTATCCATAAGTTGTTGAT TCTCACTTCAATAGATTACTATTCACATACTCTTAATTTTTTTGGATATAGCTACTATATATATTTTCAATCTTTGCGATCCATTCTTGTAATTCATATG CTTTTTCGGTATTTTACCTTGCAAACTAGGAAGTGATCATGTGAAGAAAAACAGTGTTTTATCTGAGGATGATGGCCATAGTAAGCATTGGCCACAAATG AATCACCAAGGGTGGATACAAAACAAAATAAGAATCATAATAACAAAATAAAGGAATGGAGTAATTAGGTTTGGTTAGTTATCAAACTGACTAAACCCAA TAAAAGGCATATTAAAATTAAACACAATAAATACGTAATTGAATCATATTCATCACATGGAGATATCACATGGCTAACAAACAACACACTGACTCGACTT GGCGACCATCAAGGCTATCTACAGCAGTATATATTTTTCATCTTTGAGATCCATTGTCTGTTTTGGTGACATCCCATGCAAATCAGGAAGATATATTGAG TGTCACGAAAGGTAGTTTTAAGTCATTTTCTTATTTTTCTGTGTGCAACTGGTGCATCTAAAGCTTTAGCTCCTGTATATGACATTAGTATTGTTGTGTG CATTCTGTCGTGTGTCCATTTCTATATCTGTTGTGTGCTGAACATATCGGTTCTTAAGAATGTTGGAGTACATGGATAACCTTTTGTGTCCCTTCGAGTA TGATTGCAACTTTGTATTCTTATTTTGTGACAGCACTGCAATATCCTTTTGCAAAGAAGAAAACTTAATTTTATAGTATGCTTCACTCACACTTAATTAA TGGGGTCATGGGGATTTGCATGTAAAAATAATATTTGGTCAAAATTCTTGTGTGCAATTCGCACTTATTTTTAACTCATACACAACTTATCAGTGACCTG TATTTAAGAATGGGGCTGGCATGTTATATGGTTGAGCTAGGGTCCAATGGGTTATGAATGAATGTGCCAAGTGGCAATTTTTTCCTTGGTTACATTTTTC ATTCATTTCGTATTGGATCTTCTATGTTTTTCATTTATTTTGTAGCCCTGTGATTATATTGATAATTCGATCGCGATGTGTTTTAGGTTTTAACTATGGA TAGGTTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGATAAGGGATCCGGAGGAAATTCTTTGAGTCAAGTGTCTCCTTTTTTTGCAAACTCGGATCCT GACATGCCTGATGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAACATAGCTTCTGCTTTGGAATACATTTCTGAACGCACTTCTTCAA AGGAAAATGGCCCTGGTAATGCCTCTGATCAGGATGTTGCTATGACAGATGCATGTGCTGTTAAAGTCTCAACAGGTACTAGAGGCACAAGTTTCATTGA AGGGATCTCTAAATCGTCATATGTGAAGCATGCATCTGACATTAAAGGTTCCTCTATCAAGGTTTTAAATTGCCAAGAGTCTGCCATCTACGTCCTAGCA CCTTTGAGATATGCCACTGTCTATGGATGCTCAGATGCTACAATTGTTCTAGGAGCAGTTGGCAAGGCTGTAAGAATAGAACACTGTGAACGAGTTCATG TGATTGTAGCAGCAAAACGTATTTGTATTGCCAACTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAACGACCTCTTGTTATCGGTGATAACCATAA GCTGCAGGTGGCTCCCTATAATACTTTCTACTCTCAGTTGGAGGAGCATATGAATGAAGTTGGAATTCTGCCTACGGTGAATCGATGGGATGAACCTCTA GCATTGGGCATGGTTGACCATCATGATTCGTTATCTCATCCAGCAGGTGTCTCTGATGTACAAGCTGAGTCTGCTACACGGGTGGACCCTGACCAGTTTA CAAATTTTGTGATTCCAAACTGGCTTGGAGGAGAGTCTACTGGGTATACAGAAAATAATCCATTCACGTTACCGGATGCTTATATGGCATCTCAGCTTAG AAATCAAAAGAATCTAGGGGAGATAAGGCAGCTCTTAAGAGAAGCACCTTTAGAAGAAAGTCGTAAAAAGGAATTGTCATCTGCGCTTCATGTGTACTTC AAGGACTGGTTATATGGTATCTGTCACTCTTTTTCTTTAATGGCTTTTTTGAGTGATAATTCTTTAGTTCCTTTTTTGGTAATAAATTTCAATGCTATTT TTTGGTGATCTTTTTTGCAATGCCTTTTATTTAAACAAATTCAACTTTTCACCTCTACCAGGATTGTCCAGTGCTGTCTTTCCTCTTATAAAAAAGACAG ACTGTCTTCCTGTTAAACAAATATTTTTGGGTTGTGTCCTTTAAATTTGCTTCTTGCAAATATAAAGTAAGGATGCGTCCTTCAAATTTGCCTCTTGCAA ATGCAAAGTAAGGTTGCGTCCTATAGACCCACTTAACCTCCTCGAACCCTTCAAATCACACGAGCTGTATAGCACCTGGTTGCCTTTTCTAGCATCCTTT AAACTTGGATTTATTCTGTACCAAGCTGACTCTTTCTCTGGTGAATGTTTTGTGGTTCTATGAAACCTTTTAGTGTGGTACCCTCTGAAGTATTGGCCAT TGGATTCTATATTTGGATTCATTGAACAATCACCAACAGTCAATACTACTGCAGTTGGACAGCCTTGCCATAAAATTCTTCTTTTTTAAGGATGCCTTTT TGCGTTGCTTCCTGTGCTTTGAACGATAAATTGTTTAACGACATTTACAAATCATGATCAGTGAGCAATACTATCTGATCTTTATATTTAAATAGCTATA TCAGTGAGCAATATTCAGTGGTCAATGTTGCATTATTTATTGAGAAACATGTAGCTTTTTCAAGACTTTAATTTTCCTCTGCTCCAAGGAACACCTGTAT ACAGTTGTGCACATTGTGTTAAATCATCATGCTAGTTCCTCTGATCTTTTAGCAAAAACGGACATGCATGTTTATATTTTAGGATAAAAACTTAAATAGT AGAAGTTTATACATGATAGTTTCTCGTTTATAGAAGATACAGGGTTGTGAAGGGGGGAGATAAATGTCAATACTTGTCACCTGAATTAGCCTCTAAAGGA TACCTGGAGCTACAAAGCTCCCGTTTTGTGTAGGGTCTAGTGTAGGTCAGACCCACAATGTGTGTTCCTAACCTAAATTAGCCTTCAATCAGAAGGCATT TGATAGCAGAATGTTGAAAACAAGGGGATTTAATACTTGTTTGTTTGTCCTAACTGTTGTTAAACATATAATGCTAATAATTTTTTTACTGTTGTGTCAG CTTCTGGAAATATCCGTCAGCTTTACTGTCTACAAGGCGAGTGATCATTTGTCGGATGATACATCGGCACAGTCTGTTTCTGAGTTGGTTACAGGAGGGC AATAGAGGGAAGAGAAAGGCTTCAGAGCATACACTTGTGAGGTAGCTCTCAAGCCTTCCGTTTCTCTTCATTCCCCTTTAAAAACCAACTCGCAAACAGG CCGGTAATCAATGGTACGGGACGAAGGTTTTGTTCTCCCTTTCTGAACCTCATCTTCAATTCCTCTGGCCCCTTAGGTAGCTGAGAGATCAGATGACATG AATTAGAATACCCACCTATTTAAGCAGTGACATCATTGGTGCACAGATGGAATGAAGGATACTGCTAATCTGATTGTAATAATTTTTTTATTTGTGGAAA TAATTTCTGTAATATTGTTGGCCAAATTTATTGGCCGTTGTTAAAATTTTCTACCTGCCAATATCCAGTGTATTGTTTTTTTTCAACTTCATAGTTTTTC CATTTAACTTAACTCTTCAGGTACTTGTGTTGGGTACTTAGCTTGTTATGTGATTATTTTTTTTGCAACATTAGCATGTCTTATTTGGAAGTAACGAGGA TGGGTTGGAGATAACTTTGCAATATATAACTTTAATTGATGCAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_64760; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204914
Blastp | TBCC domain-containing protein 1 from Bos with 27.74% of identity |
---|---|
Blastx | TBCC domain-containing protein 1 from Bos with 28% of identity |
Eggnog | TBCC domain containing 1(ENOG410XRXF) |
Kegg | Link to kegg annotations (538314) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421394.1) |
Pfam | Tubulin binding cofactor C (PF07986.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |