| Id Trinity | FTRINITY_DN56973_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_204921 |
| Sequence | CCCGGCCCGAGTTAGAAATATCACAAGTATGTGAGGTTAACTCTTTTGACAATTGTTTTTTTCCATACACAAGATCTATTAGTAGATGGAAAAAAACATA AGTAAGTTAGGCTAACTTTTGTAAGAAACGTTTTTTTCCAAGATTCAACGTTTTTATTTAATGGGAATCAATCACGGATACATAAACGAGCATTGTACAT ATTACCTGAAAAATGAAATGAGGAATTCCTTGCCACAAACAACAAATCAAAACACGCCACACAACCACACTACCATAGGGTGAACCTCACCAGAACATAT CCGTATCTCTCTCTTCTTCGTCTTCTTCTTCTCTCTCTCTCATTCAAAGATCTGCAATCTCTCTCTGTCTCTCTCTCTAGCAATGACCGAACCGACCGAA CCATTCGCGCCATCTTCTCCAGTGGGTCCCACAGCACCATCAAAGGACCTAACCACAGTGGTTCACCCACGCCGCGAACTCTTCGAACACGGTCTACTAC CAATCCCTAAGCTCATTTTCTCTGACCCAACCCTAACCCTAATCCCTCTCAAACAGAAGCTTCTCGAACAATCCGCGAACAACCGAGTCGACTCAGCTGT AATCGCCGACTCACTCCAGATCTCAAATGATCACGCTACTCTCGTCCTTGATACTCTTGCTTCGGTTCTTCCTCCAGTAAAGGATAATTCTGGCGAAAAC GACGCCGTTGGTGTTGATGTTTTCGATCTGCTTCTGTTTCTATACGTTCAATCTTATAAGAAGCTTCTTCCGAGAACGCATAAGGATTCTGCTGCTGTTA GTGATGTATGGCCTTCAACTTCTGCCTTTGACGGTTACTTGTCCGCGCTCTCGCCACTTCAGGTCGATTCGATTCTCGGCTTTTCCTTTGAATCATTCAA ATTGAAATTATGTTATGACATTTTCTGTGTTTCTGACAAATGCATGATATAAAAAAGAGCTGCATAATGCACTAGGCTTCTAGTCTCGGGAGGTAGATGT ATGCAATCTTACTCTCACAACTGAAGAGACTGTAGAAGTAACCTTACGGAGTTACAGTTGCGCCGAAGCTCGTTATTGTTGCTATCAAATCCTTTGATCA GGATTTCATTTAGGTCTTGTCTATTTGCATATGACATCAAAAGTTGAAATGATTTTCAATTGAATTGATTTGGAAATTGAGGGACAGTTTGTTAGGCTTA ATTAACAAACAAAAAGTGGTTCTTTCCACATGTTTTTGGAATAAGCTTGCCCAACAAGTTTGGAATGACACTGCTATCAGAATACGCGATTATTTTTAAT AAAGAACCTTTTTAAAGCTTGTGCGCAGCAACAGTCGGCGGTTTATGCCATCGCAGGCTGATGAAGAGGCGCATCAGTTGTCATATCTGCAAAAGCATCT GGCAAACATTCTGTCTCTACTAGCAGAGCCTGTGGAGGGGGAGGGCGATGAATCTCTGGTTCGTTATCAATTTATTGCATGCTATCCATAAGTTGTTGAT TCTCACTTCAATAGATTACTATTCACATACTCTTAATTTTTTTGGATATAGCTACTATATATATTTTCAATCTTTGCGATCCATTCTTGTAATTCATATG CTTTTTCGGTATTTTACCTTGCAAACTAGGAAGTGATCATGTGAAGAAAAACAGTGTTTTATCTGAGGATGATGGCCATAGTAAGCATTGGCCACAAATG AATCACCAAGGGTGGATACAAAACAAAATAAGAATCATAATAACAAAATAAAGGAATGGAGTAATTAGGTTTGGTTAGTTATCAAACTGACTAAACCCAA TAAAAGGCATATTAAAATTAAACACAATAAATACGTAATTGAATCATATTCATCACATGGAGATATCACATGGCTAACAAACAACACACTGACTCGACTT GGCGACCATCAAGGCTATCTACAGCAGTATATATTTTTCATCTTTGAGATCCATTGTCTGTTTTGGTGACATCCCATGCAAATCAGGAAGATATATTGAG TGTCACGAAAGGTAGTTTTAAGTCATTTTCTTATTTTTCTGTGTGCAACTGGTGCATCTAAAGCTTTAGCTCCTGTATATGACATTAGTATTGTTGTGTG CATTCTGTCGTGTGTCCATTTCTATATCTGTTGTGTGCTGAACATATCGGTTCTTAAGAATGTTGGAGTACATGGATAACCTTTTGTGTCCCTTCGAGTA TGATTGCAACTTTGTATTCTTATTTTGTGACAGCACTGCAATATCCTTTTGCAAAGAAGAAAACTTAATTTTATAGTATGCTTCACTCACACTTAATTAA TGGGGTCATGGGGATTTGCATGTAAAAATAATATTTGGTCAAAATTCTTGTGTGCAATTCGCACTTATTTTTAACTCATACACAACTTATCAGTGACCTG TATTTAAGAATGGGGCTGGCATGTTATATGGTTGAGCTAGGGTCCAATGGGTTATGAATGAATGTGCCAAGTGGCAATTTTTTCCTTGGTTACATTTTTC ATTCATTTCGTATTGGATCTTCTATGTTTTTCATTTATTTTGTAGCCCTGTGATTATATTGATAATTCGATCGCGATGTGTTTTAGGTTTTAACTATGGA TAGGTTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGATAAGGGATCCGGAGGAAATTCTTTGAGTCAAGTGTCTCCTTTTTTTGCAAACTCGGATCCT GACATGCCTGATGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAACATAGCTTCTGCTTTGGAATACATTTCTGAACGCACTTCTTCAA AGGAAAATGGCCCTGGTAATGCCTCTGATCAGGATGTTGCTATGACAGATGCATGTGCTGTTAAAGTCTCAACAGGTACTAGAGGCACAAGTTTCATTGA AGGGATCTCTAAATCGTCATATGTGAAGCATGCATCTGACATTAAAGGTTCCTCTATCAAGGTTTTAAATTGCCAAGAGTCTGCCATCTACGTCCTAGCA CCTTTGAGATATGCCACTGTCTATGGATGCTCAGATGCTACAATTGTTCTAGGAGCAGTTGGCAAGGCTGTAAGAATAGAACACTGTGAACGAGTTCATG TGATTGTAGCAGCAAAACGTATTTGTATTGCCAACTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAACGACCTCTTGTTATCGGTGATAACCATAA GCTGCAGGTGGCTCCCTATAATACTTTCTACTCTCAGTTGGAGGAGCATATGAATGAAGTTGGAATTCTGCCTACGGTGAATCGATGGGATGAACCTCTA GCATTGGGCATGGTTGACCATCATGATTCGTTATCTCATCCAGCAGGTGTCTCTGATGTACAAGCTGAGTCTGCTACACGGGTGGACCCTGACCAGTTTA CAAATTTTGTGATTCCAAACTGGCTTGGAGGAGAGTCTACTGGGTATACAGAAAATAATCCATTCACGTTACCGGATGCTTATATGGCATCTCAGCTTAG AAATCAAAAGAATCTAGGGGAGATAAGGCAGCTCTTAAGAGAAGCACCTTTAGAAGAAAGTCGTAAAAAGGAACTGTCATCTGCACTCCATGTGTACTTC AAGGACTGGTTATATGGTAACTCTCACGATTTTCTTTAATGCCTTTTTTAGGTGATAATTCATTCTTCAATGCCTTTTTTGGGTCATAATGCTTGGGCCT TACGCCCTTACCTGAATTAGCCCTTACCTTCAATCATAAGGAAATTAATGAGCAGTATGTTGAAAACGGAAGGGTATAATAGTTGTATGATAACAACCAA GCCTTAATCTCACTACCCTGAAGTCGGCCACATGCATTGAAGTTAAACAGATAATACTAACAATTTTTATTTATTGTTGTGGCAGCTTCCGGGAACATTC GTCAGCTTTACTGTCTACTAGGCGAGTAATATTGAAGATTAATGGTATTGGTACAGGACCAAGGTATTGTGGTGTTCCTTTCTGAACTTGTTCCTCTTCA ATTCCTATGGGCCCTTAGGTACCAACTGAGATCAGATGACATGAATTAGAATGCCAATCCTATTTATGCGGTCACATAACCAATGCACAGATGGAATGAA GAATACAACCACTAATCTTATTGTAATACTTCGTTGTTTGTGAAAATAATTACTTACTGTAATGTTTTTAGCTTAAAATGTTGGCTTTTGTGAAAATTTA CACCTGCCAATTTCCAGTGTATTGTTTGTTATCAACTTTTGGAGATTTTCCATTTAATCAGGAATTTTCTGTTGGGTAATTAACTCAATACGTGAATTTA TTTGCAAACATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64760; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204921
| Blastp | TBCC domain-containing protein 1 from Bos with 27.41% of identity |
|---|---|
| Blastx | TBCC domain-containing protein 1 from Bos with 27.69% of identity |
| Eggnog | TBCC domain containing 1(ENOG410XRXF) |
| Kegg | Link to kegg annotations (538314) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421394.1) |
| Pfam | Tubulin binding cofactor C (PF07986.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |