Id Trinity | FTRINITY_DN56981_c0_g2_i10 |
---|---|
Name Transcript | Ll_transcript_204304 |
Sequence | AAGAATAAGAACCACTACAACAACATAAAAAGATTTGAAAGGAATAAACAAATGATGGATGAATATTCTGGTAAAAGAACTACTGGTGCGGTGGTAGTTC CGAGAAAGGGAATGGGCCATGTCTTTAGAGATACTGCTAATACTAGAGACCGGAATGGTCAAGCTTGCAACCGCCTTGGTTGCAGTAGCAGAGTTAGCTC TCCTAAAGGTGCTCAAATCGGCTCTTCTGAGAAAGGTAAATCTCTGAGACCTTCAACCCAATCCTCTTCTAGTGTCAAGGAAGCAATGGGAAGTTCCTCT AGAACTTTCACAGGGACTAGTAACCCAGGAAAAACCTTTCTAAGGCCTCGGAAAACTTTGTCCTCTCAAGTAGAGGGAGATTCATCTGAAACAAGTAGCA TACAGGATGAACCAGAACCTTCAAACCTTGTCCCTCCACCTGAAAATATTAAGAGAGGGCTTCAAGCGGAAGTGGAAAATTCAGACTCTAGTGATGTCAT GCCAATGGAAGCAGGGAGCTCTAGTGTAGCATCTAATACAAGATCTCGGAGGAATTTTCAGCCAAAGCCTGGATTGCGTGCTCAAGAAGTTAAAAGTGTC GGTCAAATTGTGCGTGCGGGTAACAGTAGGCCTGGGATGAGGAACCTCAGATGCAACTCTATATCTGATGTCATCCCATCAGGTGTCTGTTCATCATCTG ATTCAACCCTTAACAGAAGCAAGGGTTTGATAAAAAAGAGAAATTGTGAAGGGGAAAGCAGTTCCAGTGCTAGAGGGAAGAACTTAACTGGGCCTTCATT TGAGGGACGGAATTCTGCTTCCAGAAATGGAATATCTATCTCTGATTCAAGAAGATCCAGAAATACTCCTTCCCTCGGGGACAGGCCAGAGAGAAATGTA GCATCAGTTAGGACACGAAGAGCAGTGAGTGGTCAAGCCAGAGGAAGGTTATCCAACCAAGGAAATGCTAATCCTGTGGCACCCAATGACTCTCTTGCAA CGATTACTCCTTTGCCACGTTCTGGCGGTCTTAATGCTCCTTGTCTATCACATCATTCTTCTGTGGAGGCTGCTTTAAGTCGTCCAGGCTCTTATATTAT GCCAGCTACTAGCAGTGAGGGGTTATATGGTGTTATGCCCACGTCTCCTTCAGAATATGGCATAACTCGTTCTCTAATAGGTCGGGAGGGCTTTCGACGC CGCTACAATATGGATGGTATTGCAGAGGTAATGTTGGCACTTGAGAGGCTTGAACAAGATGTTGAGCTAACACACGAGCAAATTCTTATGCTGGAGTCCA ACTTGTTCCTTAATGGACTGAGTTTCTATGATCAGCATAGAGACATGCGGCTGGACATTGATAACATGTCATATGAGGAACTGTTAGCTTTGGAAGAGAG GATTGGTAATGTGAGCACTGCTCTCACAGAGGAAGCACTATCAGAATGTCT BLAST |
Tissue | flowers |
Gene name | LI_gene_64830; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204304
Blastp | Probable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 45.83% of identity |
---|---|
Blastx | Probable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 45.83% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (9272591) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438353.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |