Ll_transcript_204319

Id TrinityFTRINITY_DN56981_c0_g2_i17
Name TranscriptLl_transcript_204319
SequenceGAAGTATTGGACTTTGCTTCTCTCTCTCAAAAAGCTACACCCTTTTCTTTCTCTCTGCTTCTTCTGTGTTCCAAAGGTTTCAAACGGAGAAGAAGAATAA GAAGCAAAGTGTAAAAAGGTAGCTTCAAAGCTTCATTTTTCTCTGCTGAACTGACCCTATTCAATTCTCTTTGAATTTTATGTAACTTGTTTTTCTTTTT TATGATTCAATCTTCTCTTTTCATCAACCCATTTTGTAAGCATGGATGATTTGAACTTTCTTTGTTTTTTGTAAAAATGTAATTTTTATGGACTTTGGTC CACACCCATGAATAAAATTTTATGAATTTTAATGTTGATTATTTTCTCTTAAAAAAAATGAATTTTGGGTTGGTTGAGAATATTTGATTATATGAGGGGT GCATGGAGTTTAGAATTTGATTGTTTTTGTTTTTGTGATTTGTGTTTGTTTGTAGTATAGTATTGTATTGAGCTTATTTTCAGCTCTGAAATCACGGAGA CTAAGTCTTTGTTATTGTGTGGAGATTATTTGAAACAAACCTTCATCCTTTCATTACAAAGAGAAATTTTCCAACTTTTATTTGAATCGACTTTCACCAT GTGATTATCCCTTACCATCCCTCTTTAATCTTATTGTGTTTTCAATCACTTATTACTTATTTTTATTGTTTCACTCTCAAAAACTAAATGATTCTGAGGG ACTCAATTTCTATGGTGCTTCCTAAGAGAAGTTGCTTTGCAGTTTGGCTAATCATGTTTTTTCGCGGTTGGCTTTGATCATCACCTAATCATATTTGAAA GGAATAAACAAATGATGGATGAATATTCTGGTAAAAGAACTACTGGTGCGGTGGTAGTTCCGAGAAAGGGAATGGGCCATGTCTTTAGAGATACTGCTAA TACTAGAGACCGGAATGGTCAAGCTTGCAACCGCCTTGGTTGCAGTAGCAGAGTTAGCTCTCCTAAAGGTGCTCAAATCGGCTCTTCTGAGAAAGGTAAA TCTCTGAGACCTTCAACCCAATCCTCTTCTAGTGTCAAGGAAGCAATGGGAAGTTCCTCTAGAACTTTCACAGGGACTAGTAACCCAGGAAAAACCTTTC TAAGGCCTCGGAAAACTTTGTCCTCTCAAGTAGAGGGAGATTCATCTGAAACAAGTAGCATACAGGATGAACCAGAACCTTCAAACCTTGTCCCTCCACC TGAAAATATTAAGAGAGGGCTTCAAGCGGAAGTGGAAAATTCAGACTCTAGTGATGTCATGCCAATGGAAGCAGGGAGCTCTAGTGTAGCATCTAATACA AGATCTCGGAGGAATTTTCAGCCAAAGCCTGGATTGCGTGCTCAAGAAGTTAAAAGTGTCGGTCAAATTGTGCGTGCGGGTAACAGTAGGCCTGGGATGA GGAACCTCAGATGCAACTCTATATCTGATGTCATCCCATCAGGTGTCTGTTCATCATCTGATTCAACCCTTAACAGAAGCAAGGGTTTGATAAAAAAGAG AAATTGTGAAGGGGAAAGCAGTTCCAGTGCTAGAGGGAAGAACTTAACTGGGCCTTCATTTGAGGGACGGAATTCTGCTTCCAGAAATGGAATATCTATC TCTGATTCAAGAAGATCCAGAAATACTCCTTCCCTCGGGGACAGGCCAGAGAGAAATGTAGCATCAGTTAGGACACGAAGAGCAGTGAGTGGTCAAGCCA GAGGAAGGTTATCCAACCAAGGAAATGCTAATCCTGTGGCACCCAATGACTCTCTTGCAACGATTACTCCTTTGCCACGTTCTGGCGGTCTTAATGCTCC TTGTCTATCACATCATTCTTCTGTGGAGGCTGCTTTAAGTCGTCCAGGCTCTTATATTATGCCAGCTACTAGCAGTGAGGGGTTATATGGTGTTATGCCC ACGTCTCCTTCAGAATATGGCATAACTCGTTCTCTAATAGGTCGGGAGGGCTTTCGACGCCGCTACAATATGGATGGTATTGCAGAGGTAATGTTGGCAC TTGAGAGGCTTGAACAAGATGTTGAGCTAACACACGAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTTAATGGACTGAGTTTCTATGATCAGCATAG AGACATGCGGCTGGACATTGATAACATGTCATATGAGGAACTGTTAGCTTTGGAAGAGAGGATTGGTAATGTGAGCACTGCTCTCACAGAGGAAGCACTA TCAGAATGTCTGAAGAGAAGTTTCTATCAACCCTCACCCTCAGAGGATGAAGCCGAGAGTTGCAATGAGCATAAGAATGACACCAATTGCAGCATCTGCC AGGTATTTTTCGTACATTCAATGAAGCTTTTTGCGTAACTTTGCTTTGTCATGACCGTCAGAGTGTCATTGCTTGAGAACACAATCATGGCTCAAGGTCT TACTGCATTTGATGATATAACTGCGTCCTGTAGGATTCAGTTTACGAAGTTGGTATCTGATTCCAACAAAGCTAACTTTAGGATGTGTTTAGAGGAGGAG CGTATTTGGCCTTTATCCTATCATATAAACACTTAAGCAATTGTGTGGAAGAGCTCTAAAAATAGTTTATTACCATCCTATAAGCTTTTTTAGCTTATTT CAATTAAGTTTCAGAGAAACTTATGAAGTAAGCTAAAGTACTATACCATCATTTTAAAGAGTCCATAAGCATTTAATACTACAAGTCAAACACAACTAGA AGAAATCTTGGGATTTTCATTCAGTATGCACTTAAAAGTTTGTTTTACTATCTGATATAGATAATTTACTTGGTTTGCAGGAAGAATATTTGGTTGAAGA TGAAGTCGGGAGTCTGAAATGCGAGCATAAGTATCACGCGGTCTGCATACAGCACTGGCTGAGGCTGAAGAACTGGTGCCCTATTTGTAAAGCACCAGTA GGGCCTTCAAATTCACCATCTTCATCACATTAATTGCACTGCATTGCATTGTTAGGCTATAGACAAAATTCAGTTTCTACCCACCTCATTTTCTTTATAT TTGTTATCACTTTTGTACAAAATTCAGTTTCTCCTCCTTGCCTTTTCTTATTGGTCATTTGTACAGATATTACATCTCCATTATAACTTAATAACACAAG CCAATGGCTTGATAGACTCAAACATCTTCTTAAACTTTGGGTCCAATAGTCCCATCTAAATAAATGTCCTTCCATAATGTCTTTTTTAGTCCTCTCAAAT GAAGCCTTAAGTATCTAGAAGGGGATGTAAAAAAAGTAGGAAATCAGGCTGTTCTTTATTTAATCTGCATATAGTATATAT BLAST
Tissueflowers
Gene nameLI_gene_64830; 
Additional informationdetails; 

Expression of Ll_transcript_204319

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_204319
BlastpProbable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 40.15% of identity
BlastxProbable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 40.15% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (9272591)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438353.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;