Ll_transcript_204294

• Id Trinity: FTRINITY_DN56981_c0_g2_i2
• Name Transcript: Ll_transcript_204294
• Sequence: GAAGTATTGGACTTTGCTTCTCTCTCTCAAAAAGCTACACCCTTTTCTTTCTCTCTGCTTCTTCTGTGTTCCAAAGGTTTCAAACGGAGAAGAAGAATAA GAAGCAAAGTGTAAAAAGGTAGCTTCAAAGCTTCATTTTTCTCTGCTGAACTGACCCTATTCAATTCTCTTTGAATTTTATGTAACTTGTTTTTCTTTTT TATGATTCAATCTTCTCTTTTCATCAACCCATTTTGTAAGCATGGATGATTTGAACTTTCTTTGTTTTTTGTAAAAATGTAATTTTTATGGACTTTGGTC CACACCCATGAATAAAATTTTATGAATTTTAATGTTGATTATTTTCTCTTAAAAAAAATGAATTTTGGGTTGGTTGAGAATATTTGATTATATGAGGGGT GCATGGAGTTTAGAATTTGATTGTTTTTGTTTTTGTGATTTGTGTTTGTTTGTAGTATAGTATTGTATTGAGCTTATTTTCAGCTCTGAAATCACGGAGA CTAAGTCTTTGTTATTGTGTGGAGATTATTTGAAACAAACCTTCATCCTTTCATTACAAAGAGAAATTTTCCAACTTTTATTTGAATCGACTTTCACCAT GTGATTATCCCTTACCATCCCTCTTTAATCTTATTGTGTTTTCAATCACTTATTACTTATTTTTATTGTTTCACTCTCAAAAACTAAATGATTCTGAGGG ACTCAATTTCTATGGTGCTTCCTAAGAGAAGTTGCTTTGCAGTTTGGCTAATCATGTTTTTTCGCGGTTGGCTTTGATCATCACCTAATCATATTTGAAA GGAATAAACAAATGATGGATGAATATTCTGGTAAAAGAACTACTGGTGCGGTGGTAGTTCCGAGAAAGGGAATGGGCCATGTCTTTAGAGATACTGCTAA TACTAGAGACCGGAATGGTCAAGCTTGCAACCGCCTTGGTTGCAGTAGCAGAGTTAGCTCTCCTAAAGGTGCTCAAATCGGCTCTTCTGAGAAAGGTAAA TCTCTGAGACCTTCAACCCAATCCTCTTCTAGTGTCAAGGAAGCAATGGGAAGTTCCTCTAGAACTTTCACAGGGACTAGTAACCCAGGAAAAACCTTTC TAAGGCCTCGGAAAACTTTGTCCTCTCAAGTAGAGGGAGATTCATCTGAAACAAGTAGCATACAGGATGAACCAGAACCTTCAAACCTTGTCCCTCCACC TGAAAATATTAAGAGAGGGCTTCAAGCGGAAGTGGAAAATTCAGACTCTAGTGATGTCATGCCAATGGAAGCAGGGAGCTCTAGTGTAGCATCTAATACA AGATCTCGGAGGAATTTTCAGCCAAAGCCTGGATTGCGTGCTCAAGAAGTTAAAAGTGTCGGTCAAATTGTGCGTGCGGGTAACAGTAGGCCTGGGATGA GGAACCTCAGATGCAACTCTATATCTGATGTCATCCCATCAGGTGTCTGTTCATCATCTGATTCAACCCTTAACAGAAGCAAGGGTTTGATAAAAAAGAG AAATTGTGAAGGGGAAAGCAGTTCCAGTGCTAGAGGGAAGAACTTAACTGGGCCTTCATTTGAGGGACGGAATTCTGCTTCCAGAAATGGAATATCTATC TCTGATTCAAGAAGATCCAGAAATACTCCTTCCCTCGGGGACAGGCCAGAGAGAAATGTAGCATCAGTTAGGACACGAAGAGCAGTGAGTGGTCAAGCCA GAGGAAGGTTATCCAACCAAGGAAATGCTAATCCTGTGGCACCCAATGACTCTCTTGCAACGATTACTCCTTTGCCACGTTCTGGCGGTCTTAATGCTCC TTGTCTATCACATCATTCTTCTGTGGAGGCTGCTTTAAGTCGTCCAGGCTCTTATATTATGCCAGCTACTAGCAGTGAGGGGTTATATGGTGTTATGCCC ACGTCTCCTTCAGAATATGGCATAACTCGTTCTCTAATAGGTCGGGAGGGCTTTCGACGCCGCTACAATATGGATGGTATTGCAGAGGTAATGTTGGCAC TTGAGAGGCTTGAACAAGATGTTGAGCTAACACACGAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTTAATGGACTGAGTTTCTATGATCAGCATAG AGACATGCGGCTGGACATTGATAACATGTCATATGAGGAACTGTTAGCTTTGGAAGAGAGGATTGGTAATGTGAGCACTGCTCTCACAGAGGAAGCACTA TCAGAATGTCTGAAGAGAAGTTTCTATCAACCCTCACCCTCAGAGGATGAAGCCGAGAGTTGCAATGAGCATAAGAATGACACCAATTGCAGCATCTGCC AGGAAGAATATTTGGTTGAAGATGAAGTCGGGAGTCTGAAATGCGAGCATAAGTATCACGCGGTCTGCATACAGCACTGGCTGAGGCTGAAGAACTGGTG CCCTATTTGTAAAGCACCAGTAGGGCCTTCAAATTCACCATCTTCATCACATTAATTGCACTGCATTGCATTGTTAGGCTATAGACAAAATTCAGTTTCT ACCCACCTCATTTTCTTTATATTTGTTATCACTTTTGTACAAAATTCAGTTTCTCCTCCTTGCCTTTTCTTATTGGTCATTTGTACAGATATTACATCTC CATTATAACTTAATAACACAAGCCAATGGCTTGATAGACTCAAACATCTTCTTAAACTTTGGGTCCAATAGTCCCATCTAAATAAATGTCCTTCCATAAT GTCTTTTTTAGTCCTCTCAAATGAAGCCTTAAGTATCTAGAAGGGGATGTAAAAAAAGTAGGAAATCAGGCTGTTCTTTATTTAATCTGCATATAGTATA TAT
• Tissue: flowers
• Gene name: LI_gene_64830;
• Additional information: details;

Expression of Ll_transcript_204294

FPKM

• FPAB: 7
• FPNAB: 2.1
• LF1: 5.7
• LF2: 5.2
• LF3: 4
• LF4: 4.8
• UF1: 5.1
• UF2: 5.4
• UF3: 4.3
• UF4: 5.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_204294

• Blastp: Probable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 43.03% of identity
• Blastx: Probable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 43.03% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (9272591)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438353.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;