| Id Trinity | FTRINITY_DN56981_c0_g2_i20 |
|---|---|
| Name Transcript | Ll_transcript_204323 |
| Sequence | CTTTGATAATCATCCAATCATGTATTGTTTTTGTTTTGTTTTCTGTTTTATTTCCTTTTTTTGCTTGTTCTGGCCTGAATGTGTGTTTTTCAGATTCTAT GTAATGCAAATAATAATATTAAGTAATGTTTGTCGCGAGAAATAGGATGGAACATGATGTTCTGTAATGTTCCCTTTAGTTCCAACATTCGTTGTCATGT GTCGTTCTGACACAGTGAGATGTCTATCAAACACTAAGGTGTTTACATATAGCTATAGTTGGATGTAATCTAGGAAGTTCATTTTCAGTGATACGATGGC ACCTTGTTGGTGGTTCACAAAGCCATCGTTGCAACTAGTAGGACGCGTGCCCGGATAAAGGCATATATTTGTCGAGTCATGCATGCAACCATGGAAAGTT TCTGCACAATTTGTATCAGGCTGCTTGGAAGATTCAATAACCCGTTGTTTTGACTGTTGAGTGAAAGCTTATCTGTTTGTTGATCTTTTCAAAATTCTTG TCAGACGAGATTAAAGTTTTTATGTATCATGTAAATCTGACTATCTCATTATGCTATTATGATCTATGAGTGTATGTTTGATCCCTTACCTAAAATTGAC ACATGACTTATAAATTAGACTTATCAGTTAATTGTTGCAACAGTGTTTTCCTTTGATTCCATTTGCTAGTCCCCGGATTTTCAAGTGTTTGCACATAGGT TGTTTTTGCTTTCCTGACACATGCCATGCATTTGGTTTTGTGCCTTGCCCCCTGTTTTATCTCATAATGCTGAATATGTTTCTGTCTTATCCTCTTTCAC TTGCATTACCGCCCTAGTATATCCATTTTTGCAAGGGCTTTGTCCAAATTCATCCAAAAATCTTCTGTAAGAAAATCCAGACTGAATTTTTTAAACAACT CCAATTGTTAAGAAAATAAAGTTATGTTTTAACATATTCTCCCCCGATATAAAGAAGGGACTGATATGAAGAAATTTGGTTATGATGCATGACGAATGTG TTAACACGTTTTAGATTTGCCTTAAGGTGGGAAAATTATCCACTCCCTTCATCGTATCCTAATTCAAATTTATGTGAGTTGTGCCTTTATGTCTGGCCAG TCTTTATGTTGCATCTTGAGTTCTGCTGCCTATAAGTTATTCCTATGGAGAAATGACTAAATTATTGTCTCTGCAATCTAAAATTCTATATTTATGCTTT TGACATTAACATAATTTGTTTGAGCTTTTGATAATAATCTAACATAGCATATCATTGTGTTGCAGATTTGAAAGGGATAAACAAATGATGGACGGATATT CTGGTAAAAGATCTACCGGTGGGGTGGTAGTCCCTAGAAAGGGGGTGGGACATGTCTTCAAAGATACTGCTAATACTAGAGATCGTAATAGTCCAGCTTG CAGTCGCCTTGGTTGCAGTAAAAGAGTCAACTCTCCTAAAGGTGCTCAAATTGGTTCTTCTGAGAAAGGTAAATCATTGAAGCCTTCAACACGATCCTCT GCCAGTGGCAAGGAAGCAATTGGAAGTTCCTCTAGAACTTTCATAGGGAGTAGTAGCCCAGGGAAAGCCCTTCTAAGGCCTCGGAAAACATTGTCCTCTC AGTTAGAGGCAGATTCATCTGAAACAAGTAGCATACAGGATGAACCAGAAGCTTCAAATCTCATCCCTCCACCTGAAAAGATTAAGAGAGAGCTTCAAGC AGAAGTGGAAAGTGTGGACTCTGGTAATGTCATGCCGATGGAAGTAGGGAGCTCCAGTGTAGCATCTAATACAAAATCTCGGAGGAGTTTTCATCCTAAA CCTGGATTGCGTGGTCAAGAAGTTAAAAGCAATGTTCCAGTTATACGTGCTGGTGCCAATAGTTATGGGTTGAGGAGCCTCAGATGCAACTCTGTATCAG ATGTCATCCCAGCTGGCGGTTGTTCATCATCTGATTCAACCCTTAACCGACGGAAGAATATGATAAAAAAGAGAAATTGTGAAGGGGAAAGCAGTTCCAG TGCTAGAGGGAAGAACATGAGTGGGCCTTCATTTGAAGGACGGAATTCTGGTTCCAGAAATGGCATATCCATCTCTGATTCAAGAAGATCTAGAAATACT CCTCCTCCTCACATAGACAGGCCGGACAGCAATGTAGGATCAGTTAGGACACGAAGAACAGTGAGCGGTCAAGCCAGAGGAAGGTTTTCCAGCCAAGGAA ATGCTAATCCTGTGGCACCCAGTGAGACTCTTTCAGTTATTCCTCCTTTGTCACGTTCCAGTGATCTTAATGCTCCTGGTGTATCATATCATTCTTCTGT GGAGGCCGCTTTAAGTCAACCAAGCTCTTATATTATGCCAGGTACTAGCAATGAGGAGTTATATGGTGTTATGCCCGTGCCTTCTTCAGAATTTGGCATA ACCCGTTCTCTAATAAATCGGGAGGGATTTCGACGACGCTACAATATGGATGGTATTGCAGAGGTGTTGTTGGCACTTGAGAGAATTGAGCAAGATGTTG AGCTAAGACATGAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTCAATGGACTGAACTTCTATGATCAGCATAGAGACATGCGGCTGGACATTGATAA CATGTCATATGAGGTTTGTTAATGTCATAAGGTGCCGCAATTAGATTTGTTATATTGGTTTGTTTAATTTCCCCTCATTTTTCTTATAATATCTATATTA TGGTTTGAGAGCTTTCCATTACAAGAGTCTTGGATGAAAACATTAACAATGCATGTTTTTGAAGCAGATATGGCATGAAGTATTTTGGGGTTATGAAACT ATTTTTATTTTTAGCTATTCTCATCTCTTGGTTTTATGTAATTGAAGGAACTGTTAGCTTTGGAAGAGAGGATTGGTAATGTGAGCACTGCTCTCACAGA GGAAGCACTATCAGAATGTCTGAAGAGAAGTTTCTATCAACCCTCACCCTCAGAGGATGAAGCCGAGAGTTGCAATGAGCATAAGAATGACACCAATTGC AGCATCTGCCAGGAAGAATATTTGGTTGAAGATGAAGTCGGGAGTCTGAAATGCGAGCATAAGTATCACGCGGTCTGCATACAGCACTGGCTGAGGCTGA AGAACTGGTGCCCTATTTGTAAAGCACCAGTAGGGCCTTCAAATTCACCATCTTCATCACATTAATTGCACTGCATTGCATTGTTAGGCTATAGACAAAA TTCAGTTTCTACCCACCTCATTTTCTTTATATTTGTTATCACTTTTGTACAAAATTCAGTTTCTCCTCCTTGCCTTTTCTTATTGGTCATTTGTACAGAT ATTACATCTCCATTATAACTTAATAACACAAGCCAATGGCTTGATAGACTCAAACATCTTCTTAAACTTTGGGTCCAATAGTCCCATCTAAATAAATGTC CTTCCATAATGTCTTTTTTAGTCCTCTCAAATGAAGCCTTAAGTATCTAGAAGGGGATGTAAAAAAAGTAGGAAATCAGGCTGTTCTTTATTTAATCTGC ATATAGTATATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64830; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204323
| Blastp | Probable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 41.89% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase MBR1 from Arabidopsis with 45.83% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (9272591) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417163.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |