Id Trinity | FTRINITY_DN56985_c2_g4_i3 |
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Name Transcript | Ll_transcript_203942 |
Sequence | CAGCATTGATTATTCTTGCTTCTCCAAGTGGTAGACAACAACAGAGAAAGGGAACTAACTCTTTAACTCAATTACTGTCATGAAGAAGAGCACTTCATTC TCCCAGAACATGGGATCTTTCCCTAGTCCAAATGCACCAAACTACAGAAACAAAAATGGCTTTGGAAATAACGAAAAGGGTTGGTGCTCAGAGCATGTAC CAAAGCCTAAAGGCAATGGCAGCAGCAGCAGCAGCATGAGAAGGCACAAAACTATGGCTGGCTTAACACCATTCACTAGTGGAAAAACAATGCCTTCAAA ATGGAATGAAGCTGAAAGATGGGTTTGTAGCCCAATTTCAGTTTCATCCTATGATGATAATAATAGAAGAATTTCATATGGAAAAATTCATCACAGACCA AAATCAATAAGTGGTCCTATTATGCCTCCTAAAGTAGCATCTTATTCCTCAAATTGTTACTCACCTAATAGTGTTGTTCCTCTGAGACAAGGTTTGGTTG TGAGAAAATTAATGGTGGGTTCACCCTTTTCAACAGGAGTATTGGCACCTGTTGTTTCTGTTCACAATTGTGACATTGATGACAATGGAATACAATATTC TAGTCCTGTCCAAAACCAGAATGGTGTAGGTTTATTAGCACAATCATCAATATCCTATGGACACACTTGTTCAGAACTGCAGTGTGATGAATTATGTTCT AACCTTCAAGATGAGAAACATGATGGGCTGAAGAATGAGGATAGAGTGGCATCAGTTTTCTCAAGATGTGATAAAGGTACCCAAATGAGTTCTCCTGAGA CTGAGAATGATGTACTTTCATCTCCAAAATCTTCTGCTACTTCAGCCATGGATCAGCAAGATTTTCATTCTCCTAAGTTAGGGGTCAGAGATGTGCAGAT TGATAGTCAAGCTATTCTTATCAAATGGTCCAAGAGGCATGCTACCAAATTGACCAAAGAAGACTCAATGCATAGAAAAGACTCAAGAGAGGATAGTATA GAATCCAAAGCTTCAAGTTGGGATGTTGTTAAGTCACCCTTGGACACATCCAAGTTACAGAGGGAGGAAGCCAAAATCATTGCATGGGAGAACTTACAGA AAGCAAAGGCAGAAGCTGCAATAAGGAAACTTGAGATGAAATTGGAAAAGAAGAAATCTTCATCAATGAATAGGATTCTAAAAAAGCTGAGAAGGGCACA GATGAAAGCTGAAAATATGAGAAGCTCAATACCTACACATCAAGGCAATGAAGTATCCAAGACTTGCAAAGTATTTTCTTTCCCCAAACATCTCCAGATG TGGTCTCCAAGCAACTGCTTTGGCAGCGATGCGCAGTGATCGATGGCATGTACTCGGGTTTTAACAAGGTTCAATGACAACTTAAGAATAAAGTATACAA ATGTCACTTGATCTATATGCATAGATGAGAATGTTTTTAAATAACATTTGTAGATAATATTGATACGTTTGTGCAATGGCTCATATTTTCTAGATATCAG TAATACAAGTTATGGGCTTATGGGCTTGGGCTGATGTAAAAGGTTGGGGTAGAGAGCTATATATATATATGTACGTCATGTAAACCTAATATAACAAATA GCTAAACACAAATCATTATTCTCTAATACATTGTGGTAGTCACTCAACGCTCCCAGGGACGTAGGCACAATTGGTCGAACCTCATTACCAAGCTCATTGT GTTATTCTCTTATCTCTATTCTCTTTACTATTTGATTGCTCGCTTGTTCCCAACAATTGGCATCAGAGCTCAGGCGCTAGATAATGGTTAAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_64849; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_203942
Blastp | Remorin 4.1 from Oryza sativa with 30.3% of identity |
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Blastx | - |
Eggnog | Remorin, C-terminal region(ENOG410YBQG) |
Kegg | Link to kegg annotations (4343649) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446780.1) |
Pfam | Remorin, C-terminal region (PF03763.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |