Id Trinity | FTRINITY_DN56989_c1_g1_i7 |
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Name Transcript | Ll_transcript_204885 |
Sequence | TTCTCTTTCTCTCTTTCTCTTTTTTTTTTTTCTTTTTCTACACAGAAACATTGCTCACTGGCCAAACTCCAAACTCCACACACATCCAGCATAGCATAGC ATAGGGTTCTGTTCCTAAATTAACAATCCAACCATCCAAACACACCCTCTCTCTGTAATTGGATCTGAATAGTTGCAACTTCGAAACTCTCTCTCCTTTT TTTCGTGATCTTATCTGATGGATTGAAACGCCGTCGTTTTTGGTTCATTTTTCATCACTGAAATGCTGCTGCTACTACTATTACTACCTTCAATTAATAA TTTCCAACAATTATGACCAAAACGACATTACTCGACCAAGAAAACGACGATTTCTTCTACGAATCTCATGACATTTTTCTCTCATCTTCTTGCTCCACTT CCACTTCCGATAACGAAGACGAAACCATTCATAATTACAATTATGCCCCTCTCACTCTCAACAATTACGATATTTGGATCTCTCAACCTTCTTCTATCTC CGAACGCCGTAACCGTCTCCTCCGCCACTTTGGCCTCGCCGGCGACACCTCTTTCTCTCGCGGCCGCACCGTTCACGGTGCCGCCAATAGCAACAATGCT GATATTTCAAGATCAGTTTCATCCGATCAATTCTCCCGCTGTCAGAAACCTCCGCCGGAGGCAGAACTCCGTGCTACCGTCACCTCTTCCCCCGCTGCTG CCATGCTCCGATCTAAATCTGCAAGCGCTGCGGATCGCGCGAATTGTAATAATAGGCCTTCTACTTGTTCCTCTCGTTTTTGTTCATCCGGTTCGTTTCA TTCTGTAGATGACTGCGGTGGTGATTGTGGTAGTGGTTCACCGAATAAGCCTCTTTCGGGGAGGAATTGCAGGAAGGTGGATCAATTTGGAAGCGAATTG AGGGATTTGAGTTTGGATTCGAGCAATGGTTTAGAGAATGGGGATGTGGATGAGAATGAGAATGAGAATGAGGATGAGAAGGAGGTGGAGGAGATAGAAG TGTGCACTATAAGAGATCTTGATAACGGGAAAGAGTTTGTGTTGAAGGAGGTGAGAGAAGATGGGATGTGGAACAAGGTTAAGGAGGTAGGGACAGGGAG ACAGTTGACAATGGAGGAGTTTGAGATGACGGTTGGCCATTCCCCGATCGTTAAAGAATTGATGCGGCGCCAGAACGTGGAGGAAGGGAAAGACGGTGGT TATAAGAGGGACAATGTGGATTCAATTGCAAAGGGAGGAGGAAATGGTGGTGATTCTTTTAAATTGAAGAAGAAAGGCAGTTGGTTGAGGAGCTTAAAGA GCATACGGGGCTTAAGGAGTGTCGCGAGCTCCGTGAAGGGGCATATTAGGGAGAGGAGAAGCAGCGATGAGAGGGATACTTCGTCGGAGAAGGGTGGGAG GAGGTCGAGTTCTGCAACTGATGATAGCCAGGATGCTGCTTCGTTTCATGGATCGGAGAGAGTGAGGGTTAAGCAGTATGGGAAGTCGTGTAAAGATCTT TCTGCAGTTTATAAGACGCAGGAGATTCAGGCTCATAATGGATCTATATGGAGTATTAAGTTTAGTTTGGATGGCAAGTATCTTGCAAGTGCGGGTGAGG ATTGTGTGATTCATGTTTGGCATGTTGTGGAATCTGTGAGGAAGGTTGAGTTGCTCATCGACAAACCCGAAGATGCAAATGTAAATATGTTGTTTGTTGT CAATGGCTCGCCTGATACAACAACCTTGTTGTCTCCTAAGGACAACAATCCAGAGAAAAAGAGAAAGGGAAGGTCATCCTTTAACAGAAAATCATTGAGC TCGGATCAATTAGTGGTGTCAGATCCTGTTTTTGCTCTCACAGAAAAACCCATTTGCTCCTTTCAAGGCCATCTCGCCGATGTGCTTGACCTCTCCTGGT CCAAATCTCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGACTGTGGCATATGTCTAGCGAGTCTTGTTTGAAAATATTTTCACACAGTGACTA TGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATATTTCATTAGCGGATCTTTGGATTCTAAGGTTCGCATATGGAGCATTCCTGACCGACAAGTT GTTGATTGGATTGATCTGCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGTGCACTAGTTGGTTCGTACAAGGGTAGCTGCCATTTAT ATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTTCAGAACAAGAAAAAGAAATCTCAGCAGAAGAAAATTACTGGTTTCCAGTTTGC CCAGGGAAGTTCATCAGAAGTACTTATCACATCTGCTGATTCACGAATTCGGGTTGTTGATGGTGTTGATCTTGTTCATAAGTTTAAAGGATTTCGAAAC GCAACCAGCCCAATTTCAGCTTCCCTCGCAGCAAGCGGTAAATATATTGTCTCAGCAAGTGAGGACTCCCATGTATACATCTGGAAAAATGAAGCAGATT GCAGACCCAACAGAAGCAAAGGTGTCACCGTCACTCATTCATATGAACATTTTCATTGTAAAGATGTATCCGTGGCCATTCCCTGGCCTGGTACGGGTGA TACATGGGACATGCATGCTACACTTTCTGGAGAGCAATCTGAGTTCGATCACAATGCTGATGAGGCATCATCAGCAAATCATCCTCCTACCCCTGTAGAG GAAAACTTTGGTACCGAGGGTTCACGATCCGTATCAGCTTACAACAATAGTCCGTGTCATGGCACCATTGCAAGTGCAACAAACAGTTACTTTTTCGATA GAATTTCCGCAACATGGCCAGAGGAAAAACTTCTTCTAGCTGCGAGGAACCGAAGCAGCCCTCGTGTCAGTGTGGATTTCTCAAATGGGGTAAGTCAAAA CATGTCAGCCTGGGGTATGGTGATTGTAACTGCTGGCCATCGAGGTGAAATTAAAACTTTCCAAAATTTTGGATTACCGCTTCGGATATAAAGAGTTGAT CAACTGAGAAGGCAGAGTAGACTTCACTTTCTCCATTTGTTGGCTAAAACATGTACAGAGAAATGGGTGAGAATTGTAATATTAGCGGGGTTCCATTTCT TTCCTTGTTCTTGTGCTTGTTGAATGAAGAATGGCACTGAAGGTAAAGGAGGGAAACATCAAACAGAAAAGAAAGAAAAAAAAGAACACGTGAAGTTTAG AAACCGATGGATTTTATGTAATCAGAAAATGTAGAGTAACGTGAGCCATGGGAAAAGCAAAAGCTATTCAAATTAGAAACTTATGATTCTTTTACTCTTG TTGTCTTTGATTTGTCATGGAATTCAATTCAATATCTTGTCCTGCCGAATCACATTCATCACAGGGCATGTCATTTTTCAGTCTAGCTAGAAGAATATCG TGAGATAAAGCAACTTTTAAAAATGATCTAGAAAACTTTTAAAGATGAGAGGGGACACATCTTAGCCATCAATTTATCGAAATCTAATGGTTTAGATTTA TTCGTTAATTCAAACCATTAGATTTCCTTAGAATTAAGATTTGATGTAAGTTTTTTAAACTTATTCTTGGAGTAATTAGATCTTCTCTCTTTAAGAAATA TCTTATCGGGAAACCCACTTGGCATTTCAAGGCATTAATGTAACAACCTAATATATATATATATAATATGTATGAATGGACAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_64882; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204885
Blastp | WD repeat-containing protein 44 from Xenopus with 31.01% of identity |
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Blastx | WD repeat-containing protein 44 from Bos with 35.42% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (734726) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425406.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |