| Id Trinity | FTRINITY_DN56989_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_204886 |
| Sequence | TTCTCTTTCTCTCTTTCTCTTTTTTTTTTTTCTTTTTCTACACAGAAACATTGCTCACTGGCCAAACTCCAAACTCCACACACATCCAGCATAGCATAGC ATAGGGTTCTGTTCCTAAATTAACAATCCAACCATCCAAACACACCCTCTCTCTGTAATTGGATCTGAATAGTTGCAACTTCGAAACTCTCTCTCCTTTT TTTCGTGATCTTATCTGATGGATTGAAACGCCGTCGTTTTTGGTTCATTTTTCATCACTGAAATGCTGCTGCTACTACTATTACTACCTTCAATTAATAA TTTCCAACAATTATGACCAAAACGACATTACTCGACCAAGAAAACGACGATTTCTTCTACGAATCTCATGACATTTTTCTCTCATCTTCTTGCTCCACTT CCACTTCCGATAACGAAGACGAAACCATTCATAATTACAATTATGCCCCTCTCACTCTCAACAATTACGATATTTGGATCTCTCAACCTTCTTCTATCTC CGAACGCCGTAACCGTCTCCTCCGCCACTTTGGCCTCGCCGGCGACACCTCTTTCTCTCGCGGCCGCACCGTTCACGGTGCCGCCAATAGCAACAATGCT GATATTTCAAGATCAGTTTCATCCGATCAATTCTCCCGCTGTCAGAAACCTCCGCCGGAGGCAGAACTCCGTGCTACCGTCACCTCTTCCCCCGCTGCTG CCATGCTCCGATCTAAATCTGCAAGCGCTGCGGATCGCGCGAATTGTAATAATAGGCCTTCTACTTGTTCCTCTCGTTTTTGTTCATCCGGTTCGTTTCA TTCTGTAGATGACTGCGGTGGTGATTGTGGTAGTGGTTCACCGAATAAGCCTCTTTCGGGGAGGAATTGCAGGAAGGTGGATCAATTTGGAAGCGAATTG AGGGATTTGAGTTTGGATTCGAGCAATGGTTTAGAGAATGGGGATGTGGATGAGAATGAGAATGAGAATGAGGATGAGAAGGAGGTGGAGGAGATAGAAG TGTGCACTATAAGAGATCTTGATAACGGGAAAGAGTTTGTGTTGAAGGAGGTGAGAGAAGATGGGATGTGGAACAAGGTTAAGGAGGTAGGGACAGGGAG ACAGTTGACAATGGAGGAGTTTGAGATGACGGTTGGCCATTCCCCGATCGTTAAAGAATTGATGCGGCGCCAGAACGTGGAGGAAGGGAAAGACGGTGGT TATAAGAGGGACAATGTGGATTCAATTGCAAAGGGAGGAGGAAATGGTGGTGATTCTTTTAAATTGAAGAAGAAAGGCAGTTGGTTGAGGAGCTTAAAGA GCATACGGGGCTTAAGGAGTGTCGCGAGCTCCGTGAAGGGGCATATTAGGGAGAGGAGAAGCAGCGATGAGAGGGATACTTCGTCGGAGAAGGGTGGGAG GAGGTCGAGTTCTGCAACTGATGATAGCCAGGATGCTGCTTCGTTTCATGGATCGGAGAGAGTGAGGGTTAAGCAGTATGGGAAGTCGTGTAAAGATCTT TCTGCAGTTTATAAGACGCAGGAGATTCAGGCTCATAATGGATCTATATGGAGTATTAAGTTTAGTTTGGATGGCAAGTATCTTGCAAGTGCGGGTGAGG ATTGTGTGATTCATGTTTGGCATGTTGTGGAATCTGTGAGGAAGGTTGAGTTGCTCATCGACAAACCCGAAGATGCAAATGTAAATATGTTGTTTGTTGT CAATGGCTCGCCTGATACAACAACCTTGTTGTCTCCTAAGGACAACAATCCAGAGAAAAAGAGAAAGGGAAGGTCATCCTTTAACAGAAAATCATTGAGC TCGGATCAATTAGTGGTGTCAGATCCTGTTTTTGCTCTCACAGAAAAACCCATTTGCTCCTTTCAAGGCCATCTCGCCGATGTGCTTGACCTCTCCTGGT CCAAATCTCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGACTGTGGCATATGTCTAGCGAGTCTTGTTTGAAAATATTTTCACACAGTGACTA TGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATATTTCATTAGCGGATCTTTGGATTCTAAGGTTCGCATATGGAGCATTCCTGACCGACAAGTT GTTGATTGGATTGATCTGCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGTTGGTCCAACATTAATTTGCATATTTTTCAAATATTAAA ATTGTGCTGCTCAGTAAAAATTTCTGCTTTATACAGGGTGCACTAGTTGGTTCATACAAGGGTCACTGCTATTTATATAATATTTCTGAAAATAAGTTGC AGCAGAAAAGTCAGATCAGTCTGCAGAACAGGAAAAAGAAATCGAATCGCAAGAAAATTACTGGCTTCCAGTTTGCCCCAGGAAGCTCAACTGAAATTCT CATTACATCTGCTGATTCACGGATTCGGGTTGTTGATGGTGTTGATCTGGTTCATAAATTTAAAGGTTTTGGGAATGCAAATAGCCAAATTTCGGCCTCC CTCACAGCAAATGGTAGATATGTTGTCTCAGCTAGTGAGGATTCTTACGTATACATCTGGACAAATGAATCTCATTGCAGACCTAAGAGAAGTAAAAGTG TCACCGTCACAAGCTCATATGAACATTTTCATTGTAAATATGTATCAGTGGCCATTCCTTGGCCTGGTATAGATGACGCATGGGAGATACAAGGTACATT TTGTGGTGATAAAATGGAGGTTGATGATAACCTGGATGAAGTCTCATCTGCCAATCTTCCTCCTACCCCTGTAGAGGAAAATTTTGGTGCCAAGGATTTC CAATCTGCAATGGGTTGCAAGAATAGTCCACTTCAGGGAACTATTGCAAATGCATCAAGTAAATACTTTTTTGATAGAATTTCCACCACATGGTCAGAGG GAAAATTTCCTGATGCTGCAACGAACCGAAGCCCTCGTGTCAGAATGAGCCAAAACATGTCAGCATGGGGTATGGTAATTGTAACTGCCGGCCTTCGAGG GGAAATTAGAACTTTTCAAAATTTTGGATTGCCTCTTGGGATATAAGAGGTGATCTAAAATGCATGCCTAATGAGCTTGGGAGAATGAGTTAATGATATC TGCTCAGAGGATGGTAGACTTAACTTTCTCCATTAGTTGGTGAAAACTTGTACAGGGAGATGCTGGTTGAGAATATTAGAGTAGTTCCATTTCTTTCCTT GTTCTCTTGCTTATTGGATGCGGAAATAGGTTGTCATTCTGATCAAGCATTGGCTGTGAGAAAAGGGGGGAAATGAAAACAGAGTTGTGTAGAAAAAAGA AAACAAAATATAGTATACAAAGAATTTGGAAACTGATGGATTGATGTATTGGGTAAATGTAGATTAACGAGCATGGACAGAGGTTATGGATTTATAAATG ATATTCTTTCTGTTGTTGATACCAGTCTTGTTTTGGTGTGGAATTAGATTTCTTGTCCATTGAATCAATTTCTCAATAAAATATCATGGCTACAAGTGAG ATTGTGGCTAGGGAATTTCAGACTGGAAAATTGTCCATGGCTGGAAATCTGCCTTTGTCGAGCATATTAAGATTTGTTTACCAATTGGATTTTTTTGAAT GAAAAATTATGTAAAGAAAAAGTTCGAGAGCTGCCTCAAAATATATTTTATGGTTGTTAAACCTTCCCATTATTTTTCAAATGTCAATTGGCAACTTGCT TTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64882; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_204886
| Blastp | WD repeat-containing protein 44 from Bos with 29.1% of identity |
|---|---|
| Blastx | WD repeat-containing protein YMR102C from Saccharomyces with 34.48% of identity |
| Eggnog | WD repeatcontaining protein(ENOG410XQPJ) |
| Kegg | Link to kegg annotations (286825) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425406.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |