Id Trinity | FTRINITY_DN57001_c1_g5_i5 |
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Name Transcript | Ll_transcript_172021 |
Sequence | ATCCGATTATGATATTACAATATTTATATTAAATGTTATCTTGAACAATTTATTTTGTGGTTGTAGATGATGAGTACACCCCATGGAGAGCATAATGCAC ACGAAACAGCAATTTCCATACTGGAACAGCTTAAAAGCTATACCTGGGATGGAAAAGCTGTTATAGTACTAGCTGCATTTTCTCTTGAATATGGCAATTT CTGGCACCTTGTTCAGGTTAAAAATGAAGACCCACTTGGAAGATCAATAGCATTAATGAATAGAGTTCAAAACATTGAGGGAAAAAATAGACAAGCAATT TCTGATTATAACATTTTGGTGAAGACAATATTGGTTGCTGTTGAGTGCATTACTGAGATGGAAAGTTTATCTACAAAAGGTTATGACCCAAAAGATGTGC CAGCATTATCTGAGGGCTTGTTAGAGATACCTGTCATTGTTTACTGGACAATCATCACAATCATTGCTTGTGCTAATCATTTTGATTTTATCATGGGTTA TGAGGATGATCGATATGAACTATCGAACTTCGGTAACAAGCTTGCCTCCATTGTCAGCAAATTAAAGGCGCATCAGACTCGGATCAGAAAGGAAATAGGT GAGTTAGAAGATTATTGGAAGCGTAAGAAAGTGTTTCAAACTCCAACAGAAATTGTAGAGGTTCTTAAGGTTTTGATCTTCCATGATGAAATTAAGGAAC CTCAAGTGTATGATGGCTACACTAAAAGAAGGGTACCCATTGAAGTGTTTAGAAGGAAGCATGTGTTACTCTTCATTTCAGGCCTAGACAGCATAAGAGA TGAGATTCGTCTTCTACAATCAATCTATGATGGATTACAAGAAGATCCAAGAGAAGTAAAAGGATACTTCAAAGATGATTTCAAGATATTATGGATCCCA ATAGTAAGTGATTGGAACATAATCCATAGGGCAGAGTTTGAGAATTTGAAGATAGACATGCCATGGTATGTTGTTGAATACCAAAATCCATTAGCAGGAA TAAGACTCATAAGAGAGGATTTGAACTACAAGAATAAACCTATAATCCCAGTTTTGAACCCACAAGGTAGGGTGGTAAACAATAATGCCATGCACATGAT TTTTGTTTGGGGCATTGATGCCTTCCCTTTTAGGCCCACTGATGATGAAGTACTTAGTCAGAAATGGAATTGGTTTTGGGCAGAATTGAAGAAAGTGAAT CCTACCATACAAAACCTTACTAAGGGGGACCATTACATTTTCATCTATGGAGGAACCGATCCAAAGTGGAGCCAAAATTTCACAGCAGCAGTGGAAAAAA TAAAAAGACATGAGATTACAAAGAAAGCAGATGCAATCATAGAGTCCTATAATTTTGGAAGAGATGAACCAATAAATGTTGTTCCTCGTTTCTGGATTGG AATTGAAAGCTTATTTGCTAATAAGATTCAAAAGAAGAATAGGGACTCAACAATTGAAGAAATAAAAAGCTTACTTTGCCTTAAACAACACCCACAAGGT TGGGTCCTTCTTAGTAAAGGGTCTAATGTTAAAATTCTAGGACGTGGTGACCTTATGTATGCCACTGCACTTGACTTTGATTTATGGAAAGATAGAGTGT TGGAAAAATCAGGTTTTGATGTTGCTTTTATAGAACATTATAATAGTAAGCATAGAAATTCTCGTCCTTCATGTGCACATATGCAATTGGCTAATTATCC TTCTGATGTGTTAGAACCAATTAATTGCCCAGATAAGCATTGTGGAAGATCAATGGAGATAGAGTCTATTAGTTACAAGTGTTGCCATGGTCACTCTAAC AAAGTTCAAGTTCCTGAGAGTGGTGATGTTATGATTGAGAAGAAGTTATCTCGTTAGGGTTTGGTTTGGTTGCATGGGAATTCTTCAAAGTTTGGTATTA ATTTGTGTGTAATTTTTTGTTTTCATGTGCTAGATGATGAAGGCATGGTTGCTATCTAGCTTCTTATATATGCCCTTAAATAAAACGTTTAATTGTGTCA TGTATGTTATGATATTGTTTGACATTTAAAGAAAATAAATATGAGTTTTGCTTATGAGGAATGGAATAATTTTAGCTTATGTGCTCTAGTCCTTAGAAGC ATTGTTTTAAATTGCGGTCGTGATCGCCTTATTGTTATTGTGA BLAST |
Tissue | flowers |
Gene name | LI_gene_64980; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172021
Blastp | Protein SIEVE ELEMENT OCCLUSION B from Arabidopsis with 30.77% of identity |
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Blastx | Protein SIEVE ELEMENT OCCLUSION B from Arabidopsis with 30.77% of identity |
Eggnog | Mediator complex subunit 28(ENOG4111ADI) |
Kegg | Link to kegg annotations (AT3G01680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414008.1) |
Pfam | Sieve element occlusion N-terminus (PF14576.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |