| Id Trinity | FTRINITY_DN57002_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_171225 |
| Sequence | AAGTGATTGTATGAAAAGTCTTATCATGTTCAACCATGAAGTGTTTCTCTCTATCTCTATGTCTTCTCCTCTGTCACTGTTTTCAAAGTGTGTCGTCTCA AAATGCATCTAAGAGTAAAAATCTACAACAAGCTACTATTCCACCAAGAGGTTGGAATTCATATGATTCATTTAGTTGGATAATATCTGAACAAGAATTC TTGCAGAGTGCTGAAATTGTTTCTCAGAAACTCCATGATCACGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAATGAAAGTTCCGGGTGCAT CTCATTATTCGCTCGGATTCGATGTGATTGATGAATGGGGAAGGATGGTTCCAGACCCAGGGAGGTGGCCTTCTTCCAAAGATGGTAAAGGGTTTGCTGA AGTAGCTGATAAAGTACATAGCTTGGGTTTAAAGTTCGGTATTCATGTTATGAGAGGGATAAGCACACAAGCTGTTAATGCAAACACCCCTATCCTAGAT ATAACAAAGGGTGGTACTTATCAAGAATTTGGTCGAGTGTGGCGTGCGAAAGATATAGCGATCCCAGAAAGGGCTTGTGCATGGATGCCTGACGGTTTCA TGAGCGTAAATACAAACTTGGGAGCTGGGAAAGCTTTTTTGAGATCCCTTTATGTGCAGTATGCAGCATGGGGTGTTGATTTTGTTAAACATGACTGTGT ATTTGGCGATGACTTGGATCTAAATGAAATAACCTATGTATCAGAGCTTCTCCGGGAGTTTGATCGCCCAATTGTATATTCTTTGTCTCCTGGAACTAGC GTGACACCGGCTATGGCCAAGGAAGTCAGTGGACTGGTCAACCTGTATCGTATAACAGCAGATGATTGGGATAACTGGGGGGATGTCAAAGCTCATTTTG ATGTATCAAGGGATTTTTCAACTGCTAATATGATAGGAGCAAAAGGTTTAAAGGGGAATTCGTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAAC TGATCCCGGTTCAAATCAAGGTCCGCACAGGAATACTAAACTCAATCTAGTAGAGAAAACGACACAGATGACTTTGTGGTCAATGGTAAAGTCTCCACTT ATGTACGGGGGAGATGTGCGGAAAATTGATAATACGACATATGATCTTATTACGAATCCAACTCTTCTGGAGATTAATTCTTTTAGCTCAAATAATATGG AGTTTCCTTATATCACAAGCTTGAGGAGTGAAGATCCTCTTTGGTCGCCGATGAGAAGATCCAATGAAGAAATGAAAACAACATATACACATTCGTTAAG TTTCACTAGCTGTGCAGAGTCAAAGGCAAGTGGTTGGAGTAGTGATAATATTGACCAACATGTTGAAAGATTTTGTTGGCAAAGGAGTTTAGGAAACAAG AATCTTGACCCTTTCTGTGTACACAAGAGAGAAATCCGCTTCACAATACATCAGGAGAGTATGTTTCAAAAGAATCATAGAGGAGAACATCATTTAGTTG CGACCGATAATGATAAACTTTGCTTGAACGCTTCTCCAAAACGAAAGCTTACTTCTCAAGAGTCTAGGAGAGGTTCATTTTCTCCTTGCAGATGGGATTC AAATCAGATGTGGAAGCTGAACTCTAATGGCACCCTGGTAAATAGTTATTCTGGCCAATGTGCAACAATTGAGGCTACCAAAGGTGAAATTTGTAAATAT GCACCATTTTCTAGAATGATTAGGATCCATGCAGCTTATCGAGGTTATTTTCTTTTTTACTTTGTAAAGTTATCATAAATAATCAAGTTGGTCATTCATG CAGCTACTATTAATGTCGGTGGTTTTCGCTCTTTGATCGCAACCGGAGGAAAAGGAGAAATTTATGTTGCTTTCTTCAATCTAAGTGAACAGGAAAATGT GATATCTGCACAGATATCAGACCTGGCTAAGGTTCTTCCTGGCAGAGACTTCAATTCCTGTGAGGCCAGTGAAGTGTGGAGTGGAGTTGACATAGCAACG ATGCATGCGACATTATCGACACATGGGACATTATCGGCGACAGTGACAGAGCATGGAAGTGCACTATTTGTTCTAAATTGCAACTAGTTTGGCCCTTCAT AAAGAAAGAAGAAAAGAAAAATGGCATGTCAATGCTATGTTTGGATTGATGAAAGTGTGATGAAACCTGTAAAGTGAAGACCCTTCTATATACCCTTTTG TTCTCTTTACATTCCACTATATTTCATTTCATTGCACCCTTCTAATGATAGCATTGCTATGCTTATGAGTTATGACAATAAGTTTTTTTTACCAATGTTG TGGTATAAGTGTAATTACATAAGAAATCAATTAAAGCCATTTTATATAAAATTATGGGTGGATTAGTTCATAAAATGAAGCACCTAGCAACATTTGACTC ATGTCTATTCAGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_64993; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_171225
| Blastp | Alpha-galactosidase from Coffea with 25.79% of identity |
|---|---|
| Blastx | Alpha-galactosidase from Coffea with 25.79% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001220) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438348.1) |
| Pfam | Alpha galactosidase A (PF16499.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |