| Id Trinity | FTRINITY_DN57015_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_173189 |
| Sequence | CCCATAACCCTCAAAGGTTGAAGGGTGGAAGCGTTTTTGTGTGAAGAAGAATGGGTAAAGCGAAGGGGAAGCATCGTTTAGATAAGTACTATCACTTAGC GAAGGAACATGGTTACAGATCCAGAGCTTCATGGAAGCTTGTTCAGCTCAATTCCAAGTTCCGCTTCCTCGAATCCGCTCACGCCGTCCTCGATCTCTGC GCCGCCCCCGGTGGTTGGATGCAGGTCGCCGTGCAGCGTGTCCCCGTCGATCACCTTGTCATCGGCGTTGATCTCGCTCCGATCGCTCCTATCCGCGGCG CCGTCGCAATACAGGAAGATATCACTCGCACTGAGTGTAAGGCGAAAATTAAGAAGCTGATGAACCAGCATGGTTGCAATGCGTTTGATGTGATATTGCA TGATGGTTCGCCCAATATTGGTGGTGCTTGGGCTCAGGAAGCTATGAGCCAGAACGCTCTTGTTATTGATGCTGTTAAGTTGGCTACACAGTTCTTAGCC CCCAAGGGTATTTTCGTCACTAAGGTTTTCAGGTCGCAAGATTACAGTTCCGTGGTCTATTGTTTAAAGCAGCTGTTTGAGAAGGTTGAGGTGGATAAGC CAGCAGCTAGTCGTTCTGAATCTGCAGAAATATATGTTTTGGGCCTGAAGTACAAGGCCCCTGCAAAGATTGATCCCCGACTTCTTGATTTCAAGCATCT CTTTCAGGGATCGGCGGAGCCCCAGTCAAAGGTTGTGGATGTACTTGGAGATAATAAACAGAAGAGACACCGTGATGGCTACGAAGATGGAAACACGACT TTAAGGAAATTGTCTTCAGCTGCAAATTTCATTTGGTCTGATTCTCCTCTGGAGATCCTTGGTTCAGTCACCTCCATAACCTTCACTGATCCAGCTGATT TACAAATCAAGGATAACAGTTTAACAACTGAAGAGGTAAAATCTCTCTGCGATGATTTGAGGGTTTTGGGTAAGCAGGATTTCAAGCATCTTCTAAAGTG GCGGATTAACATTAGAAAAGCTCTTTCTCCTACTCAAAAGCCTGATCCTACTGCGAAAGCTGAGACTGAAGATGAGCCTAAGGTGGATGAAGATGACAGA ATACTGAATGAAATGGAGGAGCTGACAAATGCAATGGACCGCAATAAGAAGCGTGCGAAGAAGCTTCTTGCGAAAAGAAGAGCTAAGGACAAAGCTCGAA AAGCAACAGGGATGCAAATGGACGCAGTAGAAGATGGTTATGTTGATCATGAGTTGTTTTCTCTTTCTGCTATAAAGGGAAAGAAGGATCTTGCAGCTGT TGATACCACTGAATATGAAGGTGATGAGGGTGAAGTGTATGACAGTGATAATGAAAATATCCATGAAGGATCAGAGCATGCATCCAGTGGCTTGGAGGAT TCTGATGAAGAGCGTAAAAGATATGATGAACAAATGGATGAGTTTCTGGAAGGAGCTTATGAGCGGTTTGTGGTAAAAAAGGAAGGAACTGCAAAGCAGC GGAAGCGTGTTAAGAAGTCATATGATGCAGGGAAAGAACTTTTGGAGGTATGTAGCCTTTATTTAAATATGATAAATGATGATAAACTGCACAACTCCAA TTGTGACTTCATTTTGTTTGTATTTGTCCCATTTGATTTTGCTATCATCTTCAACGTCTTGTTCCTCTGTTTTATACTCTTGAGTTTACTATCTATCATC TTGGGTGCATATTCTGATGGAGAAGGATTTAGAGCAAATATTCTGCCTGTTTAAGAACTTATATAAACAGAGATGTGAGGGATTCAGATGTGTGATTCCT TAGAGCACTACTTTCACTTTTATGAACATATCACAATATCATGGTTCCCCCTGTTTTGGAGGATTTCTATTTAAAATTTTAAAATCCAAGGGAAGAAAAA TACTCATTTAATCAGAATTCTCTTCTCCTTCCTTTACTATTACATTCCTTCAATTTCTTTCCTTTCTTTTCTTTTTCCTCCTGACATCCAAACTTACTCA GTGTCCAATACTTTCTAGTGCCTATACCCTTTAGGATTGATATTTTTGTAACAACAACAATTGCGTTTAGATATTTTTACATGTATAGATAATGTCTTTT TGGCTGTGCAGGGTGGCGAGGATGATGTTCAGCCCAAATATGATTCAGACGAAGATCTGGCTGTTCAAGAAGCAAATCCTTTAGTGGTGCCACTTAATGA TGGTACAGGGCCCACCCAAGAGGAAATCACAAATAGGTGGTTTAGTCAGGATGTTTTTGCTGAAGCTGCAGAGGAAGGAGACTTTGAGAAACAAGAGAGT GAAGATGAAATGGATATAGATGGGCACAAGGATAAGAAGTCAACAACAACAGCAGTCAAGGAGAAGAAATCCATTCTCAAAAAAGCCAAAGAAAATAAAA CAGAAGCTCCTGCAGCTGTGGTGATAGACAAACCCCAATCTCAAGCATCTAAGGCAGACGATGATTTTGAGATTGTTCCTGCGCCTGGTACTGATTCTAG CGATGATTCATCCTCTGAATCAGAGGATGATGATATTGAAACCAAAGCTGAGGTATTGGCTTGTGCTAGGAAAATGCTGAGGAAAAAGCAACGGGAGCTG ATGCTTGATGATGCATATAACAAGTACATGTTTGATGACGAGGGATTGCCTAAGTGGTTTTTAGACGAGGAGAAGAGGCACCGTATACCAGTAAAGCCAG TTACCAAGGAGGAAATTGCTGCAATGAAAGCACAATTTAAAGAAATTGATGCTCGACCTGCGAAGAAGGTGGCGGAGGCAAAAGCAAGAAAGAAACGTGT GGCAATGAGGAAGCTTGAGAAGGTACGTAAGAAGGCGACTGCTATATCTGATCAGACAGAGATATCTGATCGTTCGAAGAGCAAGCAAATAGAAAAACTG TATAAAAAGGCAACTGCTCCACAGAGGACTAAAAAGGAATATGTGGTTGCAAAGAAAGGTGTACAAGTTAAGACTGGGAAGGGAAAAGTCCTTGTAGATC GTAGAATGAAGAAGGATGCTAGGACACGCGGAATGGGTAAGTCAGGAAAAGGGGGTCCCAAGAGTAAGGGCAAGGGTGGCAAGGGTTCCAAGGGAAAAAC AGCTTCAAAGGGCTCAGCCAAGAAGGGCGGAAGAAAGGGGAATAAATGAAGCTAGGTTTGGTTAATATAATACCAAGTTCTGAGTCATGGGTTTTGTGTT ATTTGCCTGGCGCAATTTTGTTTGCTTAATTTTATTTCATGCATTGTTTTAATTGGTTGTGTAACAGATGTTATGAAAAGAACTGATAAACTGTGTTGTC CTTAATAATTTATAAATCTTAAATTTGTGTTGAATGCTAGATAGAAGGAAGATTGTTGATGTTATCGGAAAAGAAACCTTAGCTGTTGTAGTTGAAATTG TTTTTCATCTTCTATTAATGTTACCTTATTAGCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65090; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173189
| Blastp | AdoMet-dependent rRNA methyltransferase spb1 from Neurospora with 40% of identity |
|---|---|
| Blastx | AdoMet-dependent rRNA methyltransferase spb1 from Neurospora with 39.6% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (NCU03669) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413490.1) |
| Pfam | FtsJ-like methyltransferase (PF01728.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |