Ll_transcript_173203

• Id Trinity: FTRINITY_DN57015_c0_g1_i6
• Name Transcript: Ll_transcript_173203
• Sequence: TGAAGGAGGATATCTCTTCCCTTTTAGATTGGGTATTTTCTTTCTGAAAGTTACATTTTTTGTGACTTGTGTAACTATGGGTTCATGCTATACACTTAAA TGACGAATCATCTTTTAGGCAAGAAGAACTTTTCAAATAGACATTCATCTTGTTTCTTGGCTGTTGTCATGGGTTTCAGGGAAAGAAGGATCTTGCAGCT GTTGATACCACTGAATATGAAGGTGATGAGGGTGAAGTGTATGACAGTGATAATGAAAATATCCATGAAGGATCAGAGCATGCATCCAGTGGCTTGGAGG ATTCTGATGAAGAGCGTAAAAGATATGATGAACAAATGGATGAGTTTCTGGAAGGAGCTTATGAGCGGTTTGTGGTAAAAAAGGAAGGAACTGCAAAGCA GCGGAAGCGTGTTAAGAAGTCATATGATGCAGGGAAAGAACTTTTGGAGGGTGGCGAGGATGATGTTCAGCCCAAATATGATTCAGACGAAGATCTGGCT GTTCAAGAAGCAAATCCTTTAGTGGTGCCACTTAATGATGGTACAGGGCCCACCCAAGAGGAAATCACAAATAGGTGGTTTAGTCAGGATGTTTTTGCTG AAGCTGCAGAGGAAGGAGACTTTGAGAAACAAGAGAGTGAAGATGAAATGGATATAGATGGGCACAAGGATAAGAAGTCAACAACAACAGCAGTCAAGGA GAAGAAATCCATTCTCAAAAAAGCCAAAGAAAATAAAACAGAAGCTCCTGCAGCTGTGGTGATAGACAAACCCCAATCTCAAGCATCTAAGGCAGACGAT GATTTTGAGATTGTTCCTGCGCCTGGTACTGATTCTAGCGATGATTCATCCTCTGAATCAGAGGATGATGATATTGAAACCAAAGCTGAGGTATTGGCTT GTGCTAGGAAAATGCTGAGGAAAAAGCAACGGGAGCTGATGCTTGATGATGCATATAACAAGTACATGTTTGATGACGAGGGATTGCCTAAGTGGTTTTT AGACGAGGAGAAGAGGCACCGTATACCAGTAAAGCCAGTTACCAAGGAGGAAATTGCTGCAATGAAAGCACAATTTAAAGAAATTGATGCTCGACCTGCG AAGAAGGTGGCGGAGGCAAAAGCAAGAAAGAAACGTGTGGCAATGAGGAAGCTTGAGAAGGTACGTAAGAAGGCGACTGCTATATCTGATCAGACAGAGA TATCTGATCGTTCGAAGAGCAAGCAAATAGAAAAACTGTATAAAAAGGCAACTGCTCCACAGAGGACTAAAAAGGAATATGTGGTTGCAAAGAAAGGTGT ACAAGTTAAGACTGGGAAGGGAAAAGTCCTTGTAGATCGTAGAATGAAGAAGGATGCTAGGACACGCGGAATGGGTAAGTCAGGAAAAGGGGGTCCCAAG AGTAAGGGCAAGGGTGGCAAGGGTTCCAAGGGAAAAACAGCTTCAAAGGGCTCAGCCAAGAAGGGCGGAAGAAAGGGGAATAAATGAAGCTAGGTTTGGT TAATATAATACCAAGTTCTGAGTCATGGGTTTTGTGTTATTTGCCTGGCGCAATTTTGTTTGCTTAATTTTATTTCATGCATTGTTTTAATTGGTTGTGT AACAGATGTTATGAAAAGAACTGATAAACTGTGTTGTCCTTAATAATTTATAAATCTTAAATTTGTGTTGAATGCTAGATAGAAGGAAGATTGTTGATGT TATCGGAAAAGAAACCTTAGCTGTTGTAGTTGAAATTGTTTTTCATCTTCTATTAATGTTACCTTATTAGCTCT
• Tissue: flowers
• Gene name: LI_gene_65090;
• Additional information: details;

Expression of Ll_transcript_173203

FPKM

• FPAB: 4.8
• FPNAB: 6
• LF1: 0
• LF2: 0
• LF3: 3.8
• LF4: 12.3
• UF1: 5.6
• UF2: 1.5
• UF3: 3.5
• UF4: 11

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_173203

• Blastp: pre-rRNA processing protein FTSJ3 from Pongo with 34.83% of identity
• Blastx: Putative rRNA methyltransferase from Dictyostelium with 44.72% of identity
• Eggnog: Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit (By similarity)(COG0293)
• Kegg: Link to kegg annotations (100172587)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413490.1)
• Pfam: Spb1 C-terminal domain (PF07780.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;