Id Trinity | FTRINITY_DN57016_c0_g1_i10 |
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Name Transcript | Ll_transcript_171304 |
Sequence | TGTAGACTTATTTTCCTCCATGTTTGAACATAATAATGTTAAGAATGATAATAATGGAAAGAACACAGAAGAGCATTAGCACATAGGGGTTTCTTCTCAG ATTGGAATTGCCTGCCATACTCATTCTCGCTTACTTTCTGTGACCAACATTCAACAACAACAACAACAACACAATCTCTTCGAAGCTACCAACATCATTG TCTCTCTCTCTCTCTCTCTATATATATATATATATACGTGTGTGTGTGTGTATTTCTCTCTCTCTCATACCCCTGCGTCCAATTCCTCTTCTTACCCTCT ACCATATAATATAACAACCACAATCTTAAGACATGTATAGATATATTTTCCCAATATTCTATTGATTACTTTCTTCTACTTCGCTTCTTTGCTTTTTGTA ATTGTAAATGGCCAATGCATCTGGCTTCTTCACTCCTTCGCTTCCCAACTTCAGATTAAGGGTTCAAACGTTCATGGGTATTCACACATTTCAAGGATTT CCCTCCAAAGTTCTTTGCTTTGCTGCCATTCAAGGTGCTCATAAAACTACTTCTCCTTCCGAATCTCGCTTACCCAGGCTTGTCAGTCAAGGCTGCAAGT TAGTTGGATGTGGTTCTGCTGTTCCATCTCTTCAAATTTCCAATGATGACCTTTCGAAGTTCGTTGATACTTCTGATGAATGGATATCTACTCGCACTGG GATCCGTAGCCGGCGAGTTCTTTCAGGTAAAGATAACTTGACAAATTTAGCAGCAGAGGCAGCTAGGAAAGCCCTTGAGATGGCAAATGTTGACCCTGAT GATCTTGACTTAATACTGATGTGCACATCTACGCCGGAGGATCTTTTTGGTAGTGCTCCACAGGTATGCGTTCAGGATGTATCATATTGAAGAGTTGGCA AAGTAATCAGTGTTATTAGTGAATGGAGTAGTTGAGCACGTATGATGTCTCAAACGCCTTCTTGCACTTGCAGATGGTTGAGTATTGAGTTTATTACTGT ACTTTTATCTCTCCAAGATTAGATATCTTATTTTTGTTTCTTTATCTTCTCCTATAAATTTTTTGTCCTTATGAGTTTCAGATTCAGAAACAACTTGGCT GCAAAACAAATCCATTGGCTTACGACATTACTGCTGCGTGTAGTGGATTTGTGTTAGGTTTAATATCAGCCGCTTCTCACATCAGGGGTATGAGTTTGTT ATTTTGTTTACTTCATATTTGTTAAATGTGGTTAAAATAGTTGCCCTTAATTTGTGTAAATGAAGGGAGTGGTTTCCAGAATGTTCTAGTTGTTGGAGCC GATGCTCTTTCACGATATGTTGATTGGACAGACAGAGGTAGCTGTATTCTTTTCGGGGATGCTGCTGGTGCTGTAGTGGTACAGGCCTGCAATAGTGAGG AAGATGGTTTATTTGGTTTTGATGTGCATAGTGATGGCAATGGTCAAAGGCATTTGAATGCTGCCATTAAAGAAAACAATTCAAATAATACATTGGACTC TTCAAATGGTTCCGTATTAGGCTTTCCTCCCAGGCAGTCCTCATATTCATGCATTCAAATGAACGGCAAAGAAGTTTTTCGCTTTGCTGTACGAAGTGTA CCACAGTCAATTGTGTCTGCCCTTGAAAAGGCCGGTCTTCCTGCATCTAGCATTGATTGGTTACTTCTTCATCAGGCAAACCAGAGGATTATTGAAGCAG TTGCCACTCGGTTAGAAGTCCCGCCAGAACGCGTAATATCAAATTTGGCTAATTATGGTAACACAAGTGCAGCATCGATTCCCTTGGCTTTAGATGAAGC AGTTCGAAGTGGGAAGGTTAAGGAAGGCCAAACTATTGCAGTTTCCGGCTTTGGTGCTGGTCTTTCCTGGGGTTCGGCTATTATTCGTTGGGGCTGAGAG CTCATCTTTCACGGCAAATAAAGAAGAAACTCAGGTGCAAGTTCAGCTGTCCAAATACATTTTTAGAAATGGGGTTTTGGGAGGTTGCAGTGTGATAGCA ATAACATGCAGCACTCCCTCAACTTTCTATTTTTGGTCTTCATTTTCTTAGTCTTTTTTGTCTTCTTTTCTCAAGTACCAATTTTCTTTCTCCTGATAGA TATATTTGTCATTCAGATTGATTCTAAAAGAGGCTTCTATTTATGTTTGTCAACAGTACTTGTAATTTTAATGCAGCATGTGAAAGTGTATGCATGCTTG AACTCAAATAGCAATATTGGTAACAAGCAGTGACTTAATTTAATTTATGGGTTTCTTATTTGTTTAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_65098; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_171304
Blastp | 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic from Cuphea with 63.29% of identity |
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Blastx | 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic from Arabidopsis with 74.63% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447643.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |