| Id Trinity | FTRINITY_DN57016_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_171300 |
| Sequence | TGTAGACTTATTTTCCTCCATGTTTGAACATAATAATGTTAAGAATGATAATAATGGAAAGAACACAGAAGAGCATTAGCACATAGGGGTTTCTTCTCAG ATTGGAATTGCCTGCCATACTCATTCTCGCTTACTTTCTGTGACCAACATTCAACAACAACAACAACAACACAATCTCTTCGAAGCTACCAACATCATTG TCTCTCTCTCTCTCTCTCTATATATATATATATATACGTGTGTGTGTGTGTATTTCTCTCTCTCTCATACCCCTGCGTCCAATTCCTCTTCTTACCCTCT ACCATATAATATAACAACCACAATCTTAAGACATGTATAGATATATTTTCCCAATATTCTATTGATTACTTTCTTCTACTTCGCTTCTTTGCTTTTTGTA ATTGTAAATGGCCAATGCATCTGGCTTCTTCACTCCTTCGCTTCCCAACTTCAGATTAAGGGTTCAAACGTTCATGGGTATTCACACATTTCAAGGATTT CCCTCCAAAGTTCTTTGCTTTGCTGCCATTCAAGGTGCTCATAAAACTACTTCTCCTTCCGAATCTCGCTTACCCAGGCTTGTCAGTCAAGGCTGCAAGT TAGTTGGATGTGGTTCTGCTGTTCCATCTCTTCAAATTTCCAATGATGACCTTTCGAAGTTCGTTGATACTTCTGATGAATGGATATCTACTCGCACTGG GATCCGTAGCCGGCGAGTTCTTTCAGGTAAAGATAACTTGACAAATTTAGCGGCAGAGGCAGCTAGGAAAGCTCTTGAAATGGCGAAGGTTGACCCTGAT GATCTTGACCTAATATTGATGTGCACATCTACACCGGAGGATCTTTTTGGTAGTGCTCCACAGATTCAAAAACAACTTGGCTGCAAAACAAATCCATTGG CTTATGACATTACTGCTGCATGTAGCGGATTTGTGTTAGGTTTAATATCAGCTGCTTCTCACATTAGGGGAGGTGGATTTAAAAATGTTCTAGTTGTCGG GGCTGATGCTCTTTCACGATATGTTGATTGGACAGACAGAGGGAGCTGCATTCTTTTTGGAGATGCTGCCGGTGCTGTACTAGTACAGGCCTGCAACAGC GAGGAAGATGGTTTATTTGGTTTTGATTTGCATAGTGATGGCAGTGGTCAAAGGCATTTGAATGCTTCCATTAAAGAAAACGATTCAAATAATGCATTGG ATTCTTCAAACGGTTCTGTGTCAGACTTTCCTCCCAGACAGTCCTCATATTCTTGCATTCAAATGAATGGCAAAGAAGTTTTTCGCTTTGCAGTACGATA TGTGCCACAATCAATTGAGTCCGCCCTTCAAAAGGCGGGTCTTCCTGCATCTAGCATTGATTGGTTACTTCTCCATCAGGTATAGACAAGTTCACTAGTT GCATATCTTCATTACATAATCAAATCAATTCGTAAAGTAATGAGATTAATTTACCATTTAAAAATATCATTTTAGTTAACTTTGGCAACAACCTCTTCAC TTAAGTTACATACATCTACCATCCTCAGATTTCATTAGATGGAAGCCTCGTATACTGTGTCGTACTAGTTAACTTCGGAATATTGCATAGCACACATGAT AATATTATCTTTCTGAGAATTGGAATGTAACATCATGCATATATATATATATATATATATATTAATGTGCAGGCTAATGAGAGGATTATTGATAGTGTTG CAAATAGATTAGAAGTGGGAAGAGAAAAGGTGATAAGAAATATAGAAAATTATGGTAACACAAGTGCAGCTTCAATTCCATTGGCATTAGATGAAGGAGT TAGAAGTGGGAAGATTAAGGAAGGCCAAACTATTGCATCTGCAGGATTTGGTGCAGGTCTTACTTGGGCCTCAGCAATTTTTAGATGGTGCTAACAATTT TTCTTTCTTCACACATTATTCTATCTTTACATTGGTTTGTAATACTCGACCTGCATTCCTATTTTTCTGATATCAGACACGGTTTTTATAAATTTTTCAA CTTGTACCTCTGGTAATTGTTAATGTATCATTGGATATTTTTTACGGTGGGTTAAAGTTGTTATTCTTGGAATGATGAAGAGATAAAACAGAAATAGAAG ATTGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65098; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_171300
| Blastp | 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic from Arabidopsis with 72.37% of identity |
|---|---|
| Blastx | 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic from Arabidopsis with 72.37% of identity |
| Eggnog | Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids (By similarity)(COG0332) |
| Kegg | Link to kegg annotations (AT1G62640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436161.1) |
| Pfam | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (PF08545.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |