| Id Trinity | FTRINITY_DN57024_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_171623 |
| Sequence | AACAACATCGTACATATTATTTTAACATTGTAGCAACATGGCTAGCAGAGAAATTCTCCATAAGATGAAGGTAAGTACACACAAAAAACATGGTTTATCT TATGCAAATTAATTAAACATTATATATTACTTATAACAAAGTTTAACTTGTGAATTAGTATAGTGTGTTTGTAAGTTTGTTCATGGGTTTATTTTGCAAA TGCATATTCTTACAATCTTATGGAGTTTAGTGGATGTGTTTTGGAAGTAAGTAAGCAAGTTGTTTGTTGTTTCAGCTAGTTTTCTGAACAGTGATTGATG AATTGGTATGATTTATTTTATTCACTTTATGCATGGATCAGTATTCACCATGTTACTTACTTTCTTTTCATGCCTTTATTTGCTTGGAAAGTATAAATGA TTAAATTTTGTCTAATAATATAAATCAGAAAGTTTTCAGTGCCTTGCATCAGCAGAAACAATATGATCAATATGGCTATTTTCAGTTGCTTGTGTATTAC TCATGATGCTATTGTGGAAAATAATTTATTTGAAGATGATAAAGGTAATGGATCAAACAAGTTCTGTGTTTTTAACCAGACCCAAAATGAAGAAGCTTAT TCAAAATGGTCACTATCAACTGCTAATTGCCCCAAATATTGGCTAACAAGAGCAACTTATTTTCTTAAGTTTGTGAAAATAGCTTATGATCTTTTTATAA GTTCTTTTTAGCTTATTAGTAGTTTACCCGATTAGTTTAACATAGTTTCAGGGCATAGCTTCTAAAAATGTGACTAAGATTCACTTCAATCATATGTATC TTCTAGGCCAAAGCAGGGTTTGGAACATCAGCACCAGGCACAGGGAAAGGAAAAAGCAAAATGTCAAAACATATTACACATGGCTTCCACTTGGTGAAGG GAAAAGCAGGACATCCTATGGAAGATTATTTAGTTTCAAAATTTAAGCAAGAAAAGGACAAAGAACTAGGCTTGTTTGCTATATTTGATGGTCACTTAGG CCATGATGTTGCAAGCTATTTGCAGAATCACCTTTTTGAAAATATCTTGACACAGCATGACTTCTGGACTGAAACCGAAAGCGCGGTAAAGAGAGCTTAT ATTGAAACAGATGATAAAATTCTGGAACAAGCACTTGTTTTAGGACGAGGAGGATCAACAGCAGTAACTGCAATACTAATTGATGGTCAGAAACTTGTAG TAGCAAATGTTGGTGATTCTAGAGCTGTTATTTGTGAGAATGGAAAAGCCAAACAATTATCAATTGATCATGAACCCAGCAAGGAAAAAAAATCTATTGA AAAACGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTTCCTCGTGTAGATGGACAGCTAGCAGTAGCAAGGGCTTTTGGTGACAAGAGCTTGAAGAAG CATCTTAGTTCAGAACCTGATGTGTTTCAAGTGGAGATAGATCAACATACAGAATTCCTTATTCTGGCTAGTGATGGAATATGGAAGGTTAGTTTTTTCA CCATTTTTCTTTCCTATTCCAATTCACAATAATGGCCTATTGTTGCTAAAAATGATAGTGACCAAAGTGAAAAAGGATAAATCTGAAAGTCTGAAACTAC AATGAAGATCCTCTGTCCCGGTCCACATCCTCATTTGTGTCTCGGACCAATTAAAATGTATAATTTAATTTAATATAAAATTATAAAAACAAAATCATAT TACTTGGTGTGGTTCTATTTGGTAGAGACAGAGTTTCTGAGACAGAGGATCTTGTCCTTGAACTATGAATTGACCTTTTGTATTTTCTAGGTTGTGTTGT AGCTTGCTTGACTTGCAAGTTTGTTTCCATTGATTATGTTGACACAGGTTATGTCAAACCAAGAAGCAGTGGACTCTATAAGACAAATTAAAGATGCTGA AGCAGCAGCAAAGCACTTGATAGAAGAGGCTATTTCCAAGAAAAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGACATATATGTTTTAAG GAAAAGTTGAGCATTAAGTAGAGTTTATGTTTGTATATCAAATGAACTTGTTCTTTTCTAAGCTGAATATTTGTAGAAAACAGATTGCATGTATAAATGA TGAAGTTAATCGATTCTGTCATGAGTATCTGTTGTTACCATAGCTTGCAACAATTACAAGTTCCAACAATCTGCGAATACAAAATATCAGTTCTGTTGTA TACCGAAGAATTATGTTATAATTGACTGGCGAGTAACAAGTAGTCATTCTTCAAGGATATTCCTAATCTGTATGGCATTTTTGTAGGAATTGACTTCTAA ATCTACAACAATTACCGTCATAAGCACGGAAAATCTCCAAAACTATTCGTACAAATAATTAACTCTGAACTCGTTTACTGGTCAATGTGAAACTATCAAA AGGATTACCACCCTACATTCTATTTCCTTTGCTTTACAGCAATACACTTATATATTATGCTGATATGGGATTGAGATTCTGCTATATTTTCTTACCATAG TCTTGACGCACAATGAACTGCATGAAATTTGGCCGTGTTATGAGGCAGTGTCCTTGTTGGAATTTTATATTGAGAGAACTTCAAGTTCTTTTTGATAAAG GGAATTGACATTTATTATCATCTTTTAAATTTAAGTGACTCTTGTGGCTTATATCCATGCGATTTTGTTTCCTCTATGCCCCAAAACTATGAACTTACTT GATAGTAGAGTTTTGTTAAAGCTTCTTTTGTATTTTGGTAAGAGTTTTATTAAAGCTTCTTTTGTATTTTGGTAAGAGTTTTATTAAAGCTTTGTGCATG TGTAAGTTACTAAAGGATTCTCTTACAACACTCTTACCAGCATATGTTTATTGTAGGAGCGCTTATCAAGACTTGAAGCTGCCTTAACTAGTAAGAAAGA TACTGGAAATGAGGAGCACTTGAAAGTGGTTAATGATCTTCAGTCAAAGCTAAAGGGCGCGACTGCAGATTTAATTTCAGAAAAGGAGAAGGCACAGAAG CTTGCTGTAGAAAATGAAAAACTTAAATACCGTATAATTCATCTTCTGAAATCACTCAAGGATGCGGATCTGAAGTTAGAGCAATCTCTCAGCTTGCGAG GGTAAGACTGCGTACAACTACTATTCCAAAATTTTGCTGGGGGAGCCTTGTGCACCAGACCATCCTTTTTAATAATTTGGACGAAATGCCGAGTATGCAA AATGCAATTGTGAACTTCTCTGGATTACACTTTTGATGAAATACAAGCTTCAATGTATTTTATGTTGACTAAGCTGTTATTTTAAATCCAAATTAGGCAT TCTATCTGTTTATAAACAGGAGAATAAAATTAAGAGCACATGAAAATTTAAGCCATGTTAGAAGAATGACACCAAACTTTTCCCTACATGCTCGCTCGAG GTGAAAACGAGTTGTGTTGGTGGTGACACTGGCATTGCATAATTCACCCAAGAGGCCAAGACTAGTCAAAGGGCTAGTTTAGTATTGTACAAGCTAACCC ACATGGTGCTGGCATTGCAGAGCATGTTGGAGTGTTAGGACTTAGAACATAGGATCCAATTATAAGGTATGAGATGAGTCATATACCGGAAGTATCCGAC TCCGATATTGGTTTTATATAAACTTGAGCTCTCTAACCACAACAGCTAGATTTTGTGGTGTGGTCATAGCAAGACTCATATCAGTTGCTCTGCCTTGTTT TGCTTACTCCACTTGAGACTAGTCCAATGGTGGTTATTCATGATGATTTATGAAAAATGGTTGAAATTATTATGTGCACTATTATGAAGAATGAAATTTA AGAAATGGTATTTCATGGGAACTCACCTCTAAATTTGGTATTATGTCATTTCCTGACCCCAGGTTACCACACAGGAGCAGCTAGAGACCTTGAAATTGCA GGATTCTTGAGCTTATAGGCTCAGATAAACTCTTACTTTATTATTATTATTATTATTTGTGTATTTTCTATTTTATTGGAAAACCAGCCAATTCCTTGAA GTGCATAACAAATATAGGATGTTCTTGGCAACTGTAGGGGATTCAGATCTTTGTTTGCTTCATACATTAGCACAAAAATTTCTTATAATTTTTTATACCG AGATGGTGGCAATTAAGAGTTATTCTAAATAACCATAAAGAATAAGCCAAGATCAAAACATTGGTTATTAGAAAAGATATCCAATTTCCATTTAGCATTG CCAACTCATTTTGGTTCCCACATTGGCAAACTATTTTTTCTTGAGTAGCATTAACTTATGTTCTCTTGGATCTGTTTGCGAGTTGGTTTTTGGAATGGAA GAACGAGAAAGGGAAAACTTGAAAGCCATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65174; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_171623
| Blastp | Probable protein phosphatase 2C 58 from Arabidopsis with 75.24% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 58 from Arabidopsis with 74.89% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT4G28400) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453708.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |