| Id Trinity | FTRINITY_DN57028_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_173229 |
| Sequence | TAATAATATAAGTATAAAATATTAAATACAGTAACTAAATATACCTATAACGTACCGATATTTTGGCAGGGTAACGTACCGCGTACTATGTACCCGTACT GGAGAGAACCGCGTATCATGTCACTATGGTTTAAATACTAGAAACATTATATTGATGAGGATAAGACTGTATATATATACTTTTTCGGGCTCTAATAGGT GGGAGTCTCGTACACGGGATAGGGACACATGAGTATGATCAAGGTCATATTGCTAGCATTTTTTGAAGAAAATATGAGATTCACATGTTTCCATGTCTAA TTGAACATGCAGTGATTTACATCATCCCTTTATTCCTTTGTTGATAGTTGATTTCACAATACACATAAGGTTTATTGAATACCATGGTGTATCACACTTT TCTGTGGAATTTCATGATATGGCCAAGTTGATTGTAAATATCTTTCAATGAAACAAACAAGATATGCTTTGGGCACTAATTCACTGCCATTTTATCTGTG TTTTCATTGTTGGAAAGTGCAGTTTCAGATTATTTTCAGTTAGATGACTTATTGACACCAGAAGAAAAATCCATCAGGAACAAAGTGAGAGACCTTATGG AAAAAGAAATTGCTCCTATTATGACAGAGTATTGGGAAAAGGCCGAATTCCCATTTCAGATTATTCCGAAGATAGGTTCACTGAACATTGCTGGTGGTAC AATCAAGGTTCTCTATGTTCATATTTCCATTGCATTAAGTATTGTTTAAGTTTAAGATAATGTAAAGGGGATTCTTAGCTAGCTCTGATTCTCAGGGTTA TGGTTGTCCCGGTCTTTCTGTTACTGGAGGTGCTTTAGCTGCAGCCGAAATTGCTAGAGTTGATGCAAGCTGTTCGACATTCTTTGTGGTCCATTCCTCC TTGGCAATGCTTACTATAGCGTTGTGTGGCTCGGAAGCTCAGAAACAAAAGTATCTACCTTCTTTGGCAAAGCTGCAAACTATAGCATGTTGGGCTTTGA CTGAACCTGATTATGGAAGTGATGCTAGTGCTTTGAATACCACAGCAACAAAGGTGGAAGGAGGTTGGATCCTTGATGGCCAAAAAAGATGGATAGGAAA CAGTACATTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACTACAACAAATCAAATAAATGGGTACATTGTGAAAAAGGATGTACCTGGTTTAACAGTC ACAAAAATAGAGAACAAAATTGGACTTAGGATAGTACAAAATGGAGACATTATTTTAAGGAAAGTGTTTGTCCCTGATGAGGACAGAATAGCAGAACTCA ACTCTTTTCAGGACACAAACAGGGTAAGATTGTGTATGCATTTTTTACTCCTTCTGTTACTTCAATAGCAATTATATATCATTTCATCATTTAAACAATT AATAACTGTTATATATATATAGCTATTGCCTACTATAAACTTATGAAGCATTAGACCATTTCTAAATCTTGGTGCAGATTTACTTTTAGAGCCACTTGAT GTACCTTCACAGTATTCTCTGTGTCTCATAGGTTATGAGCAGCATCTGCATTTGTCTGGTTCTACAGCCATCAATGTTTAATATGCATGTTACTTTCATT TTGTTACTGTTAAATATTGTCATATCTGATTTTAAAAACAAGAAGAATCTAGTTTTCATTTTCCTTTCTCTATGCATTATTAGTCCTAAAGAGAAAAATG ATAGCGACATGCCGACACTATTTTTAGTAAATTTTCAGCAACACTGCTTCGTTTTCTATTTAGCCGGTCTCGCATGAAATCCATCCAATAATAATGTTAA AGAAAATGTTGAAAAAGACATGTTAGTATTGCTCTAGTATATTATTCTTGGCCTCCATCAAATCTTGCTTGAATATAAAGCCATTGCCAGACCTTAAACT AACTCCATTATTGTATCATTGTATTTTGCTCTCTGCCTAGCAGCAAAAGGATGTATTGTTGTTATTGTTGTTGCTGCAATTTTGTATATTGAGTGTAATA CCGTTGTCAATGTAAAGATTTATACACAGTCCTACATTATCCACCATTCGTTTAGATTATTTTTATTTTTTTAAGAGTCAATGATGATTAGATATGAATG GTAATGATGCAGTGACAGTGTATAAAATCCATATACCGTCAGTATATATTTTTTTCGCTTGTATTTTTTGTGTACAATTTACATGTTGGCTCATTTTTTA TCTCAAAACAGGTACTTGCCCTTTCTCGTGTAATGGTTGCTTGGCAACCTATTGGTGCATCAATGGGCATATATGATATGTGTCATAGGTACCTAAAGGA AAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTAAAATGCTAAGTAATGTTCAAGCAATGATCCTTGTCGGTTGG CGCCTATGCAAGTTGTATGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGAAAGGTAACCTTGTAACTTGTATGATAATGTATCACATTTGCTA CACCCTTTCACCATAGCATGAAAAATAGTAATCAAAATGCAAGGTTTGTTTGACATAATTACATTCGAGTATTTGACACTGCTTTTGTTTCATTGTACTT GCCGGATATAACTAAGCTTAAATCTCAGGGAGTGTTACTGTAATTTTATACATTAATTGCGGTAAGTAATCGACTAACTAGTTGTCATCATTTTTCAGTC ATGGATCAGTTTGAGGGCTAGAGAAACAGCTGCCCTTGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTTGTGGCAAAGGTTCTCATG CATAATTCCTAATTTACATTTTTAAAGCCCATTTTGTTATCTTGAAAAATTGGATTTCTCATGACATCATGTGAAAATGTCATATAAAAGTTCAGTGTGT AAAGATTTATACACAATCAGTTCTGCAATTTTTTCTCGTAAAAGTTCTACTTAAGAACCAAGCATGAAATCTATCATAATTAATATATACTTGAAGAATA TGTAACTTCTACACATGTTATAAGCACTTATATACATAACAATTGCTAGAGATTAAGATCATAATATAGCATAAATAAGACCATTTTGCATTCTGACATT TTTTTTGCTACTTTCTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65208; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173229
| Blastp | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 81.43% of identity |
|---|---|
| Blastx | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 74.13% of identity |
| Eggnog | acyl-CoA dehydrogenase(COG1960) |
| Kegg | Link to kegg annotations (AT3G51840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450332.1) |
| Pfam | Acyl-CoA dehydrogenase, middle domain (PF02770.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |