| Id Trinity | FTRINITY_DN57028_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_173230 |
| Sequence | TAATAATATAAGTATAAAATATTAAATACAGTAACTAAATATACCTATAACGTACCGATATTTTGGCAGGGTAACGTACCGCGTACTATGTACCCGTACT GGAGAGAACCGCGTATCATGTCACTATGGTTTAAATACTAGAAACATTATATTGATGAGGATAAGACTGTATATATATACTTTTTCGGGCTCTAATAGGT GGGAGTCTCGTACACGGGATAGGGACACATGAGTATGATCAAGGTCATATTGCTAGCATTTTTTGAAGAAAATATGAGATTCACATGTTTCCATGTCTAA TTGAACATGCAGTGATTTACATCATCCCTTTATTCCTTTGTTGATAGTTGATTTCACAATACACATAAGGTTTATTGAATACCATGGTGTATCACACTTT TCTGTGGAATTTCATGATATGGCCAAGTTGATTGTAAATATCTTTCAATGAAACAAACAAGATATGCTTTGGGCACTAATTCACTGCCATTTTATCTGTG TTTTCATTGTTGGAAAGTGCAGTTTCAGATTATTTTCAGTTAGATGACTTATTGACACCAGAAGAAAAATCCATCAGGAACAAAGTGAGAGACCTTATGG AAAAAGAAATTGCTCCTATTATGACAGAGTATTGGGAAAAGGCCGAATTCCCATTTCAGATTATTCCGAAGATAGGTTCACTGAACATTGCTGGTGGTAC AATCAAGGGTTATGGTTGTCCCGGTCTTTCTGTTACTGGAGGTGCTTTAGCTGCAGCCGAAATTGCTAGAGTTGATGCAAGCTGTTCGACATTCTTTGTG GTCCATTCCTCCTTGGCAATGCTTACTATAGCGTTGTGTGGCTCGGAAGCTCAGAAACAAAAGTATCTACCTTCTTTGGCAAAGCTGCAAACTATAGCAT GTTGGGCTTTGACTGAACCTGATTATGGAAGTGATGCTAGTGCTTTGAATACCACAGCAACAAAGGTGGAAGGAGGTTGGATCCTTGATGGCCAAAAAAG ATGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACTACAACAAATCAAATAAATGGGTACATTGTGAAAAAGGATGTACCT GGTTTAACAGTCACAAAAATAGAGAACAAAATTGGACTTAGGATAGTACAAAATGGAGACATTATTTTAAGGAAAGTGTTTGTCCCTGATGAGGACAGAA TAGCAGAACTCAACTCTTTTCAGGACACAAACAGGGTAAGATTGTGTATGCATTTTTTACTCCTTCTGTTACTTCAATAGCAATTATATATCATTTCATC ATTTAAACAATTAATAACTGTTATATATATATAGCTATTGCCTACTATAAACTTATGAAGCATTAGACCATTTCTAAATCTTGGTGCAGATTTACTTTTA GAGCCACTTGATGTACCTTCACAGTATTCTCTGTGTCTCATAGGTTATGAGCAGCATCTGCATTTGTCTGGTTCTACAGCCATCAATGTTTAATATGCAT GTTACTTTCATTTTGTTACTGTTAAATATTGTCATATCTGATTTTAAAAACAAGAAGAATCTAGTTTTCATTTTCCTTTCTCTATGCATTATTAGTCCTA AAGAGAAAAATGATAGCGACATGCCGACACTATTTTTAGTAAATTTTCAGCAACACTGCTTCGTTTTCTATTTAGCCGGTCTCGCATGAAATCCATCCAA TAATAATGTTAAAGAAAATGTTGAAAAAGACATGTTAGTATTGCTCTAGTATATTATTCTTGGCCTCCATCAAATCTTGCTTGAATATAAAGCCATTGCC AGACCTTAAACTAACTCCATTATTGTATCATTGTATTTTGCTCTCTGCCTAGCAGCAAAAGGATGTATTGTTGTTATTGTTGTTGCTGCAATTTTGTATA TTGAGTGTAATACCGTTGTCAATGTAAAGATTTATACACAGTCCTACATTATCCACCATTCGTTTAGATTATTTTTATTTTTTTAAGAGTCAATGATGAT TAGATATGAATGGTAATGATGCAGTGACAGTGTATAAAATCCATATACCGTCAGTATATATTTTTTTCGCTTGTATTTTTTGTGTACAATTTACATGTTG GCTCATTTTTTATCTCAAAACAGGTACTTGCCCTTTCTCGTGTAATGGTTGCTTGGCAACCTATTGGTGCATCAATGGGCATATATGATATGTGTCATAG GTACCTAAAGGAAAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTAAAATGCTAAGTAATGTTCAAGCAATGATC CTTGTCGGTTGGCGCCTATGCAAGTTGTATGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGAAAGGTAACCTTGTAACTTGTATGATAATGTA TCACATTTGCTACACCCTTTCACCATAGCATGAAAAATAGTAATCAAAATGCAAGGTTTGTTTGACATAATTACATTCGAGTATTTGACACTGCTTTTGT TTCATTGTACTTGCCGGATATAACTAAGCTTAAATCTCAGGGAGTGTTACTGTAATTTTATACATTAATTGCGGTAAGTAATCGACTAACTAGTTGTCAT CATTTTTCAGTCATGGATCAGTTTGAGGGCTAGAGAAACAGCTGCCCTTGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTTGTGGCA AAGGTTCTCATGCATAATTCCTAATTTACATTTTTAAAGCCCATTTTGTTATCTTGAAAAATTGGATTTCTCATGACATCATGTGAAAATGTCATATAAA AGTTCAGTGTGTAAAGATTTATACACAATCAGTTCTGCAATTTTTTCTCGTAAAAGTTCTACTTAAGAACCAAGCATGAAATCTATCATAATTAATATAT ACTTGAAGAATATGTAACTTCTACACATGTTATAAGCACTTATATACATAACAATTGCTAGAGATTAAGATCATAATATAGCATAAATAAGACCATTTTG CATTCTGACATTTTTTTTGCTACTTTCTTTCTCATATGTTGCAGGCATTCTGTGATTTAGAACCTATATATACCTTTGAAGGCACATATGATATCAATAC ATTGGTCACAGGAAGAGAAGTAACTGGATTTGCTAGCTTTAAACCTGCTTCCAATAGAAGTAGAATGTGAAAGTGTAAAACTACTCATCTATAACTCCAC GATCCATTGGTTAATAATTTTTACAACTGTGACAAATAAAAATTCATATGCACTCAATCTTTATACAAATTTTGGTGTATATGACAATATAGTAAAGTAA AAAATAATGATCCTGTATTGGGCATTGAACAATATACAAAAAATAAAACATAGTATTTGCTTTAGTCTTTATGAATGTTACCATGTTTCACTTGTGATAT GATTATTAAACTTTTGTTTTTGTTGTTGTTGGGTTATTGATAGAATATGATAAGTATATCTATAATCTATAATTTGTGAGGAAGGTAAAAAAGTGATTTT TAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65208; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_173230
| Blastp | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 79.91% of identity |
|---|---|
| Blastx | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 76.33% of identity |
| Eggnog | acyl-CoA dehydrogenase(COG1960) |
| Kegg | Link to kegg annotations (AT3G51840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450332.1) |
| Pfam | Acyl-CoA dehydrogenase, N-terminal domain (PF02771.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |