| Id Trinity | FTRINITY_DN57031_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_172428 |
| Sequence | AAATGATTTCCTATCCTATCTCTTTTCTATATATGACTACACAACACTAAAAAACAATGAAAATCATGCACTCTTCTCTGTCATAGCATCATCTAACATA ACATAACGACAATCTTAATTAACAAAAAAGAACATAGCAACTACATATGATTGATACATGCCACCTTAGTTGTTTGCATAGGATAACTATGGTTATTTGC AGGTTCAGATCTTTGCTTTCTCTTTCCAAAACCAATCCTTTCTTCCTTTCTTCTTCATCATTCTCAATCCGCACCTTCTCTTCTTCCCACCTTCCTCAGC ACTTGCAGAATGTTGGATTCATTGGACTTGGAAATATGGGATCTCGGATGGCAATTAATTTGGTTAAGGCTGGGTACAAACTCACAGTTTATGACATAAA CTCTGATGTTCTTAAGAAGTTCTCTCAGATGGGAGTTTCCACAAAGAAAACACCTTATGAAGTTTCAGAAGCAAGCGATGTTATAATTACAATGTTACCT TCCTCTGCCCATGTGAGTATGGTCATTCCAATGTCATTTCCTTTCGTGTGAATATATTACATCACCTTTGTCTCCTGGAAATAGTCTCTCTGCTTATGGA GTTAAAACTGTGTACATCTACTTTCCTCAGATCGGGTCTGGCAGACCCACTAAGTGGGAATCTCGCTTACTAGTCAAGTTTCATATCAAACTATTGCTGT GGAGAATGATTATATCCTTTCTGATATTAAGTTTACATATATGTGGTGCCATCTTGAAAGCAGGTTGATTCCTGATAGCGATACTTGTTGGTAAGGCAGC CGCACATCCTGTAAGGGCTTAGTTCCTTACCCGTAGGATTAGAGGATACCAATGTTATAACAAAATCTTCAAAGCAGGCCCTAATCTGTGAACAATTACT TTTCTGGACAGTGATCTGTAGTTTACTAAGTTGTGTACCTAAATGACTAAATATCTCATTTACCACATTACTGGTTTGGATGAATTGTCTTACTGCTCCA AAGATTATTGTTTGCCTTTGTACTGATGCAAGAATAACATCCTTATTTAAGTAGGTAATTGATGTTTACACTGGACCAAATGGTTTGCTTCATGATGGAA AACTCTTAAGGCCATGGTTATTGATAGATTCATCCACCATTGATCCACAAACATCCAAAAACCTTTCTGCTACAATATCTAATTATACTCTGAAAGAAAA GAAAGGTGATCAGGAAACACCTGCCAAGTTGGAAGCTCCTGTATCCGGAAGCGTGATTGCGGCGGAAGCTGGGACACTTACTTTTATGGTTGGTGGCTCT GAGGAAGCATTTCTAGCTGCAAAATCAGTATTCTTTTCAATGGGTAAAAGTGCAATATATTGTGGAGGAGCAGGAAGTGGTTCAGCTGCAAAAATCTGCA ATAATTTGGCAATGGCTGTGAGCATGTTAGGAGTATCAGAAGCCCTTGCTCTAGGCCAATCTCTTGGAGTTTCTGCCACCACTTTGACAAAAATATTTAA CTGTTCTAGTGCTCGCTGTTGGAGCAGGTATGCAGATCTTTATTCTCTCAATTCAGAAATGACAATATGTGGTAGCAAATTTTCTTATAATAAGCCTTGG AATTAGTATTGTGCTTACGGTGAACATGCTTGATTCCCCTTAAGCAATGTCTCGAGTTCGAATCTTGTAGATGAAAAAATGTCCATTGGGAGAGTTAGTC CTACATACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65231; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172428
| Blastp | Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 70.11% of identity |
|---|---|
| Blastx | Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial from Arabidopsis with 66.46% of identity |
| Eggnog | Dehydrogenase(COG2084) |
| Kegg | Link to kegg annotations (AT4G20930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425632.1) |
| Pfam | NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (PF14833.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |