| Id Trinity | FTRINITY_DN57031_c4_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_172440 |
| Sequence | TACTAATCCTCTTATCCACAAAAATATCATAAAATGATACTTTATTTATTATAAGTGAGGATTTAGCATTACTCCTTATATTATTAGTCTTTGCATTGTT GTTACATAGGAGATGATGATTCATTTACTCAAATAGCAAGTCTAAAAAATTTATTATGTATCTTAATCATTAATTAAAAAAATCTAATAATTTAAACGAG TAATATTAAATTTTCCTATAATCAATGACTATAGAGAAAATAAAAAAAAACTTATTCTTATTGAACTTAATTCTCTACTCAAATTTTGCAACGTTGGGTA GCCGAAAAATAAAATTTTGCAATGTTAGTGGGAGACTGGGAGGCTAGGGCATAGTAATCCGTTACACATAAATGAAATGACAAAGTAGTCCTTTTTATGC ATCATCAGGGTTTTACAAAATCTCCGAGGTTTGGAATAGCAGAAAGGGTTGAGACTCGAGACTGAGAAAGAGCGATGGAAGGTGTATCCTACGCGCGCAT GCCCAGGGTCAAAATCCGCGAACTCAAAGACGACTACGCCAAATTCGAGCTCCGCGACACCGACGCCAGCATCGCCAACGCGCTCCGGCGCGTGATGATA GCAGAAGTACCAACAATCGCCATCGACCTCGTCGAAATCGAGACGAACTCTTCTGTCCTTAACGACGAGTTCTTAGCGCACCGTTTAGGGCTTATCCCTC TGACCAGCGATAGAGCAATGTCGATGCGGTTCTCGCGTGACTGTGACGCGTGTGACGGTGACGGACAGTGCGAGTTTTGCTCCGTCGAGTTTCATCTGAG AGTGAAATGTATGACTGATCAAACACTCGATGTGACGAGCAAGGATCTCATAAGTTCTGATCATACTGTTACTCCTGTTGATTTTAATGACTCTTCTCTC ATTGAATCATCTGATATTAACACTAATAGGTATTTCTTTAAATGGGGTTTTCTCTCTTTTTAGCTCAGCTTTTTTTTTCAATTTTGTTTCATTGGGTCTG CTTCGATTTCGATTGGGTATTTGTTTCTTTCTTAAAGCTTGTTTTTTGTCTCGTTTATATGCTTATTCTTCATTTTTCAACTTGTTTTTCATTTTATTTA AATGGGTCTTCCATATTTTGAATTGGGTATTTGGTTTTTTCGACTGGGTATTCCACAATGTCGTTTACCTTAATGCTGTGTCAGTGTAAAATTTCAACTG GGTGTAGGCAGTCCGGCATGTTTGTTGTTATTCTTTATGCTGCAGCCTGCGGCAGTATAAATTGTGAGTGGTGGAGGCTAGATATGTGCCGCCTTACTAT CAACCCCCTCCAGGCCCCACCAAATGGAAGCCTCTGGCCGCCTTTTTTAGTGTAAGTGTTTAGTTTTGCGGGCGAGAAAAAAATAGTTGGAACCTAGTTC ACGAAACTCCAACCTGATTTTACCCTGCAAGAGGAAGGGTGTTCAACCTGTGACTTCCAAGTCACATGGCACTGGCAACCTTATCATTGCGCAAAGCACA CCCTAATTTTTAGGCAAGATAATTTTTTTGCTAAATCTAATTATATAGCTTTTTACCTGGGTATTCTTTGATATTTGTTGTGTTTCTGAATGCTATAGCA GTGTAGATTTTTTGGTTTTATAGTGCAATGTGTAATTTGAGTTGCATTCAATTCAGGGGGATTATAATTGTGAAGTTAAGGAGAGGACAAGAGCTGAAGC TGAGAGCAATAGCTAGGAAGGGTATTGGTAAAGATCATGCTAAATGGTCGCCTGCGGCCACTGTCACTTTCATGTATGAACCAGAAATCCACATTAACGA GGATTTGATGGAGTCCTTGACACTTGAGGAGAAAAAAGAATGGGTTGAAAGTAGTCCTACCCGTGTATTTGACATTGATCCAGTAACTCAAGAGGTTGGG TTTTTCTGATTTGTTTTATTTTGATTGTGTTGGAAAGGTTGTGCACTTTGCACTAATTTCATCACTAATGCTAGTATTACTATTATCTGATCCTTATCTG GTGCTTAGTTGTTGTTGCTATGGTCTACCTAGTTTGATACCTCACTAATTGCTTCTGAGAAATCTGTGATAATATACTTGTCTGGTATACTATACTGTCT GACACAGCTTTTTTAGATTTTAGGTTGGATAGATCAGATAATATAGAATTAGGCAGGATAAGTACTTGATGGATACTGGATAACTATTATTTCCATTTTC CTGCATCACTATCTATTTGACTTTTTGGGTTGGGTAGAGAAGAAAGTATAATTAGATGTGCTTTTTATTTTCTTTCTGCATTAAAGGATAGACAACTGTA ATTTGATGTTTGGAATGATTACGTGGTGCTTCCTGTGAGTAATTTGCTTTCTAATGGTTTTCAAGACTTGTTTTTCAATTGGTTATGGGTATGACCTCTA ATATAAGCTTACAGAACCAAATATGCAGCAAGCGAGAGACCATTATTCTGCATATTTTGGGGATGCTAGCTGTCATCTGGACAATAATATATTTGCTTTC AAGAGTATACGCATTAGTATGCTGACTTTTATGTAGGAATTCAAGTTCATCTTGGAGTAAGGATTTTGTTCCGGTGTACATTTATCTTATCATCCTTCAT CCGTCAATTTCTTTTTCATCCTGCTTAAAGTTGCTTCCATCACTCCCAATGTTGGAGGCTGAGTAATAGGAAAATTCTTCACTCAGAACTTATAGAAATT GCGCCACTTCATACAGTATCATTCTAGAATATGAACATACTTGAGTGCAGAAAATAAGATGCAACTTAAGTGCCAAAAGTGTAAGAAGAAGAAGATATTG ATACACCTTCTGCTAAAGCATTGAAAGTTCTTGAAATTGATGTCTTATCTATGCATGTCAATTACTTTGTGTTGTAAACATTTTTGTCTTTGTGAATTGA TGATATATATGATACAGAATAACCATTTCCATCATAATATATCTTTTATCAACTAAAAAACATTTTAAGGTTCTATTTGTAATTTATTGCTATGAATCCT TCCTTGCTGTATTGTGCACTATTATATTATTAAAACATAAAGATCAAAGTTTGCAATCCTTTGATTGTTTTGTTTGGAGCTGATTTTTTGTGACTAATAT TTTAGCATTTTATTAGGTTTTGGTGATTGACCCTGAGGCATACACCTATGATGATGAGGTGATCAAGAAAGCAGAAGCAATGGGCAAACCTGGGCTTGTA GAAATCAATGCAAAACAGGATAGCTTCATATTCACAGTTGAATCTACTGGCGCTGTTAAAGCTTCTCAGCTAGTACTGAATGCCATAGAAATTCTGAAGA CGAAGTTGGATGCGGTGCGGCTATCTGAAGATACCGTGGAGGCTGATGATCAGTTCGGGGAGCTAGGTGCACATTTGCGAGGAGGATGATCGAATCGATG GAAGGATTTCACTCTTTGTTTTCCTGAACTTGTTTGTTGCATGTTGTGTTTAACTGAATAGCTGCAGCATGTGCTACCTCATTGAACCAGAGATGCTAAT TGTCATTATGGTCCCTTTTAGATAGACATTTATCTTTGGAATTTAATACTATATGATATAATCTATTATATTTTTCTTGTGTCAGTTGAGTTTTTGAACA CCTTTGTCATATGTAGCATACTTAGAATACTAGTTAAATGTATTGGTGGCAGAGCTAATTTAGTTATATAATGAATTATAAACAAATGAAATTGTTTAAA TTAATAATATTTATTTAGTAATTAGTTTTTCAGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65234; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172440
| Blastp | - |
|---|---|
| Blastx | DNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 80.41% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0202) |
| Kegg | Link to kegg annotations (AT2G15430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445856.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |