| Id Trinity | FTRINITY_DN57036_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_172982 |
| Sequence | CTTCACTACTCCAGATTCGCCGTTTACTTAAACGTCGCCGTCAAAGTGTTACATTTCACACTCTACACCGAAGAAGGTTCTAGAAGGGAAAGATTAAGTG CTTTTTTTCCCACACGAATTTGAATTTTTCGATTCGAAGAACCAATGAGTGGAGCTTTAGCAGGGTTACAAGATCACCTCAAATTAGCAAGAGAATACGC ACTCGAAGGAATCTACGACACTTCAATCATCTTCTTCGATGGTGCAATTGCACAAATCAACAAGCATTTAAACAGTGTTGATGATCCATTACTCCGTTCA AAATGGATGAACGTGAAGAAAGCATTATCTGAAGAAACTGAAGTAGTGAAGCAACTAGATGCAGAGAGAAATGCATTTAAGGAAACTCCAATTGCTAATT CAAGAAGGCCTCCTTCACCACCGATATCAGTTTCTTCTGCTAAATCTAACTTTGTATTTCAGCCGTTGGATGAGTATCCGGCTTCTTCATCATCATTTGG CGGCGGAGGTGGTGGTGGTTTTAGTAATCCGGTGGATGATCCCGATGTGTGGAGGCCGCCGAGTCGAGATACTTCTAGAAGACCACAGGCTGCAAGGAAT TTGAAGAAAGATGGCGCGTGGGCGCGTGGTGCTACTTCCAGAACAACAACAACCGGTGCTGCGACAAATGCTAGTGCTCGTGGTGGTGCGAGGCTGAGTA GGGTTAACTCTGGAGCTCGAGGATCGGCCGCTGTGGTGAAGAAAGGGAATGCTTCTGGAAAGTCTAGTAAGACAGATTCAGTTAATGGGGATGGGGATGA TGGAAAGTCAAAGAGGCCACAATATGAAGGTCCTGATCCTGACTTGGCTGAAATGCTTGAAAGGGATGTCTTAGAAACCTCTCCCGGAGTCAGATGGGAT GATGTTGCCGGCCTCACTGAAGCCAAAAGGCTACTAGAAGAAGCTGTTGTTCTTCCACTATGGATGCCTGAGTATTTCCAGGGAATTAGGAGGCCGTGGA AAGGCGTACTCATGTTTGGTCCTCCAGGAACTGGGAAGACACTTCTTGCTAAAGCTGTTGCTACTGAATGTGGCACCACTTTCTTCAATGTTTCTTCTGC TACTTTAGCTTCTAAGTGGCGTGGAGAGAGTGAGCGCATGGTACGGTGTCTATTCGATCTTGCAAGAGCATATGCACCAAGTACTATTTTCATTGATGAA ATTGATTCTCTGTGCAATGCCAGGGGGGCTTCTGGGGAGCATGAATCATCCAGAAGGGTGAAATCTGAACTTCTAGTTCAGGTTGATGGTGTAAATAATA CTTCGACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCAGCCACTAACTTCCCATGGGACATAGACGAGGCACTAAGAAGAAGGCTGGAAAA GCGTATATATATTCCTCTTCCGAGTTTTGAGAGTCGTAAAGAGCTGATCCGTATCAACCTGAAGACTGTAGAGGCTAGTTATTGTGATACTGACATTGGC CTTAATTTTTCTTCATCTTTGTTGTGTAAACTGTAAAGCCTTAAATAGATTTTTGCAATGAAATATGAATAGATAAGTTGTGTTATCTTGAGCAGTGAAT TTGAACATTTACTTCACCCAAAAAAATGAAGAAATTGAGCATTTAACAAGTTATGTCTTGACTTGCACCAGGTGGCCACTGATGTTGATATAGATGATGT GGCTCGCCGAACAGAGGGCTATAGTGGAGACGATCTGACTAATGTTTGTCGCGATGCTTCCTTGAATGGTATGAGGCGTAAGATAGCAGGAAAGACTCGT GATGAGATCAAGAACATGCCGAAAGATGAGATTTCAAATGATCCTGTTGCTATGTGTGATTTTGAAGAAGCTTTGAGGAAAGTCCAAAGAAGTGTTTCTC AGGCTGACATTGATCGCCATGAGAAATGGTTTCATGAATTTGGATCAGCATAGGGAAGATTGTGACACACATCGGCAGTTTCTCTTTTTTGAACCTTCCC ATTCTTTGCACAGACTGGTTGATTTGTGCCTCAATTGTTTCTCATTGTTATCTTTGTTTTCTGATATGGTTGTTGGTTGTAATTTATGTAATGCAATCTG ATATATATTCATACCCATTGTGGCAGTTTAACTTCTACAGCAACTAGTATGGCTCTTCTAATGCCATGCTCGTTTGACAAATTATTCGTCTCAGAAAATC ACAGAAATTTCCCAAACATTCAAATACCAAGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_65262; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_172982
| Blastp | Katanin p60 ATPase-containing subunit A1 from Arabidopsis with 78.67% of identity |
|---|---|
| Blastx | Katanin p60 ATPase-containing subunit A1 from Arabidopsis with 62.79% of identity |
| Eggnog | katanin p60(ENOG410XPN7) |
| Kegg | Link to kegg annotations (AT1G80350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448125.1) |
| Pfam | Holliday junction DNA helicase ruvB N-terminus (PF05496.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |